TCONS_00069260 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069260
Unique NameTCONS_00069260
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2263

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069260 ID=TCONS_00069260|Name=TCONS_00069260|organism=Clytia hemisphaerica|type=transcript|length=2263bp
ATTGGTCATGAGATGGGAAATGCTAACGACAACATAAGAGACGACATGGT
TGAATCGTGCGACGCTACCAATAAAGCATGTAATACCATCGTCTCCATGC
TGAACACAGATGAAAATAACAACGCACAAGAACCAACCAGTGAGAAGACG
TTGTCAGACGCAGCAAAGATTCTTCTATCGGCAATCACCAAGATTCTGAT
ACTGGCTGATCGAACGGCTATATTAAAGCTGGTCAAATCTGCAGCTAAGG
TGAACGCCCGTTTAGAAGAATTAGAAAGTGTGACGAATTTCACGGAATTC
GTCAACGCGTTCAGTCAATTTGGTGGTGATATGGTTGAACTGGCCTATGT
CTCTGGTGAAAGACAAAATGACTTACGTGATGAATTACAAAGGGCAGAAG
TTTGTGCAGCGAGAGCCATTCTTGAGAAGTCAACCATGATGTTACTCACA
ACTTGCAAGACTTGTTTACGTCATCCCGATTCACCGTTAGCGAAAGGAAT
ACGTGGGGCTGTCTTCCAAAGCATGCGAGACGCAATGACGACGTTGAAAG
CTGTTATTGAAAACAATGAATGTCCTGGGAAAGCTTTCTGTTGTGGAATT
TCACTGGATTTGAATAATACAAAGGAAGGTATAGAAGATTTATTGAAAAA
CCCCAAAGATTACCAGAAGATGGAAAACCTAATAGACACGGTGGACAATA
TTAATATCGACATGGAAGATCTTattaacaaagaaaatattgaagattCA
AGAAAATCATTACTAAAAGCTTTGATAATGCAATCGAAAGGTCTTCATAA
AAACCTGTTGGAATTTGTGGAAGATGACCAGGTGACTGAAGACGAAGAGA
ACATATATAAAACGTTGAGAGAACTTTCCGATATTTGCGATGAAATGCTG
GAAGAGTCCAGCAAAGCGAGTGCAGAGCAAGTGTTTCATCTGGTAGAAAC
ATGTGAATATAAAGAAGTTTTAGCACGTCTGAAAGAATCGGCGCTCTCCG
GTGAACTTGATAAAGTCGAAGAAACTGCAGAACGATTGGAAAGTGTGCTT
AGTGAAATTTTACAGGTTACCCGGCTGACAAAAGCCACGAGCAATATAGA
TGCTTGTATAATCACAGCAACAAGATTAGAAGAAAATTTGATCAATCTGA
TGCCACAGGCCATTGATGCAGGAAAAATGTTATCAGCACATCCAACAAGT
AAAATTactcaagaaaattttgaagtctTTATTGATGTATGGGATACGCA
GGTTGACGAATTACTTACATTACTGAGGAATATCACCGAAGGTCACACGG
AGAGTTGAATTTTTTGCAACTCGCAATGACTGACGGTAAATGGCGTTTGA
TGTAAATGTATTTTTACCATTATTTGAAAACTACAAAAGTTCTTTGTAAA
ATAGATaggaaagtcaaaaaaagttgaaaaaagtaTTAGACTATCTTTGG
GAAAACTTGGAATCAATTTATGAAAACATGGAAACAATCTGTTTTACTGA
AAAGTGGACTAACTAAATGAAATCTAGTTATGCAGCCACCAAAGCACATC
AGTGTGAAAACGTTCCAAATCATATCTTTGTGCCTTTTTTAATCTCCAAG
TTAGGCTATTAAGATTATATCTTATTTGCATTTCCttagttcaatttttc
ttagaatttattttggaaACACACTGTAAATATTGCAATTTTTGAGCATT
AAATTTCACCAGTATTTCCTTACTTAAAGGGATTGAATTTTAAAAGTACT
ACACTTCTGtacgaaattttaaaatatggcGCCTTTTgagataattttca
ataaaagtttACATGTTACTTACCAAAGATTTCCggtattttgatgaaat
ttaacgAAGTTTTATAATTTCATCACCGCAAAAGctgatttattttgaat
ttaatgcaAAGTAAAACAtacaacatttgaaagaaataattcaagtttgt
tttttctttcctgtcataatttcaagtcaaaattttATCTAGGAAAgttt
atattcaaattttgagcaaatttttgGAAGCGTAAATTTTGTGGCCCATG
TGAGCATTTGGCGTCAAAGAACTAGATTTCGAATACGTAGAATTCTGAAT
ACCTTTGTAAGTAtagttttaaaatctttatttaataattaatttttctt
cattaatGGATGACTCTTTAAAGATGTAAATAGCATTTTATTTATGAGAT
GGTCATGTTTTGTTATTTAGCTTTTGTGTTTCGaacttgaagaaaatgaa
aattgaaaattaa
Run BLAST on NCBI

transcript from alignment at scaffold_496:505753..512996-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069260 ID=TCONS_00069260|Name=TCONS_00069260|organism=Clytia hemisphaerica|type=transcript|length=7244bp|location=Sequence derived from alignment at scaffold_496:505753..512996- (Clytia hemisphaerica)
ATTGGTCATGAGATGGGAAATGCTAACGACAACATAAGAGGTAATAGAGT
CTATCCTTGTCTTACAAGATATCAATAGTCGCAAAAACGTCCATATTTTT
ATAGAAAGTATTATGTATGGCACTTTATTTCAAAAGATTTTTACTATGAG
GCTTAAGGATTAAATTCAAGCATGTTTTGTAAAACTTTGCATCTGACAAG
GTCCATTTTATTCGATCCACACGGTACGTCACTGTTGATTGTAAATTTAG
TTCGCCCTTATAAACACTCGAACAGGTCACGGTTTGATTATCATTAGGTC
CTTGTGTGCTATATTCTAAGACAAATCACTATCTAAAAATAAGCGAAAAG
CTAAAGAAACGGTTTCTCAAACGGTTTTTTTACGGACGAAAGTTTACATG
TTTGACAGTCTTTTGTTTAATTCAACACTTGCCGCCACTATTTTTCGCCA
AACGGTTGTTAAACTCCACGCGCACATATTTCCCACTTTTACTATCCCTT
TATTTAACAGACGATAGTATCGTCTATTATTATCTTCTATTTCATACTTT
CACAGACGACATGGTTGAATCGTGCGACGCTACCAATAAAGCATGTAATA
CCATCGTCTCCATGCTGAACACAGATGAAAATAACAACGCACAAGAACCA
ACCAGTGAGAAGACGTTGTCAGACGCAGCAAAGATTCTTCTATCGGCAAT
CACCAAGATTCTGATACTGGCTGATCGAACGGCTATATTAAAGCTGGTCA
AATCTGCAGCTAAGGTTTGTGAGAGTGATTAAGTGTGGAACAAACATCTT
TGTTTAGAAGATCAAGAAGGAACATCTTTTCTAGATTGGCAAAATTTATG
GCAATTCTGCTCATTTTATAAACAACAGTTTGATCTTCAATTTGAATACT
TGTGAATTAAACGTCTCTCACTTCAGGTGAACGCCCGTTTAGAAGAATTA
GAAAGTGTGACGAATTTCACGGAATTCGTCAACGCGTTCAGTCAATTTGG
TGGTGATATGGTTGAACTGGCCTATGTCTCTGGTGAAAGACAAAATGTAA
GTATTTTCAAACTTAAACCTCTGTCCTGGAGCACTCAGATGGAATATTTT
TCCACTATAAGACTCTGTTATTCGTAGGCTATTTTCTTTCAATAAAATAA
GAACTATACGTGCATCCTCATTTAGATCCATATGCATGGATATTGACTGC
TCGGAGTTGGAAGTTGCTGGGGATTCCTGCGAGCTATTATACCTCGGTAA
TGAGCCTCTTTATAGTAAGTTGAACAAACATTGCTTATAAAAATACTATA
GAACAACTCTTAATGTATAAAATATTTCTCTCGTTATAGGACTTACGTGA
TGAATTACAAAGGGCAGAAGTTTGTGCAGCGAGAGCCATTCTTGAGAAGT
CAACCATGATGTTACTCACAACTTGCAAGGTACATTTCAATCCCTCATCT
TTTCATTTTCTTTGCAATTTTTTCCTATAACTTGAAAATATTTTTATATC
TAATATATTAATATATTCAGTATCTTAAATTTCCTGGTAACCAAAAGATT
ATGTCAGCTGCTCAGGCAACCTTTCAAATGATTTTATAAAGTTCACAATT
TTTTTCAAATTTTTACGGAAGAAAATATCACATATATACGACATTACGCT
ATTGGAGACACCTTTTCATAAATTACGTCACGAACATCACTTGCCTCATT
TCGAAATTATTGCCATGGTGATTAACTCCCAGCGGATTTCATTAAAACTA
TTTTCTGTTCATAAAAAAATCATTTAATGTCTCAAGGGACATAATCACCA
TGGAAATTGTTTGAATACGAGGCAAGTGATGTTCGTGACGTAATTTATGA
AAAGGTCTATTGGAGCCGCATTATTAAAAATCTGATAAAATTCTTTTTAC
AGACTTGTTTACGTCATCCCGATTCACCGTTAGCGAAAGGAATACGTGGG
GCTGTCTTCCAAAGCATGCGAGACGCAATGACGACGTTGAAAGCTGTTAT
TGAAAACAATGAATGTCCTGGGAAAGCTTTCTGTTGTGGAATTTCACTGG
ATTTGAATAATACAAAGGTATTGGTCAATGATTTTTAAGAAAGTTCTATG
AATGAATCTATGACTGCTTACTGTCAACTTTATTGCAAAGGCGCACAGTG
ATCTTAAATGTCGTCCGCAGGCGAGGTTATGTGGCAAGTCAATGACCTTC
ATCCTGGCTAACCAATGCCATGCGAGGGGAATTGGGTAGGCAAAAACTTA
GGAAGCTTTTTGGGAGCTGTGCTAGGTGTCGATTTCACAATACACCGTGG
ATGGTGTAAGTGCGCAGGTCTTGCTCCCTAGTGGTTCATGCCAGATTAAC
GCACTTGATCCAAAAAATTGATTGTCAGTATCGAATGCTGGTAGGCAAAA
TAAACAATCGTGAAGACAGTCTTAACGAGACGACTCCTAGACCGCTGAAT
GACCGGCTATCATCTGTAAATGAGAATCCACTTATCACTGTATTTTATTT
TTGTTAACTGTATATTTGAATTCTTAACTCTCGTAACCCACAGGAAGGTA
TAGAAGATTTATTGAAAAACCCCAAAGATTACCAGAAGATGGAAAACCTA
ATAGACACGGTGGACAATATTAATATCGACATGGAAGATCTTATTAACAA
AGAAAATATTGAAGATTCAAGAAAATCATTACTAAAAGCTTTGATAATGC
AATCGAAAGGTCTTCATAAAAACCTGTTGGAATTTGTGGAAGATGACCAG
GTAAGAAATTCTGATTGGAAGGTTTTGGATCTGACCATTTAGTTTAAAGC
CCTGAAGGGGCTACAATCAGTGAAAAAATATGTGGCAGTTGTGAGCTTTT
TCTGAGCATGGTGGCAGCCTTTCTACCCATCAACATTGATACTAGGGGGG
GAGAGGGAATTCTTGCCACAATATTTAGTCACAGATTGTAGAGATGAATC
TTTAACCTTTCTCAAGCAAGAAAAAGTGAAGCCTTAAGATTTGCGCGGCA
TCTAGAATAAAGAATTGAATCTAGCTTTTTTTAATTTTTAAGCAGCACAT
TTTTCGAAATCGGGCGATAAATTTTACTTTCAATCCAGCGTTTGTGTGAA
AATACTGGATGGCAAATAAGTAGCTTTATTTCCGATTTAAGACTTTCCGA
TCTAGGACTTTTAGGGTTTTGAAATCAACGTGTCTGATCCATGTCTAAGT
AAGGGTAGGTGCACATTCGATACTCGTTATGTAGCATCGCATATGCAAAT
TCAGGATAGACGGCCCCACATCAAGGCTCTACCGAAGTCTCTTTTAAGAG
CACAAAAAGAAAACTCGAGAAAAATGTAAAATTCTATACTAACAGTTTCA
AGAAAATATAATTTCTTGTTTTTTTTCCTATAAACCAAAGGTGACTGAAG
ACGAAGAGAACATATATAAAACGTTGAGAGAACTTTCCGATATTTGCGAT
GAAATGCTGGAAGAGGTAAGAGACGTAAATCAAATGAGTCGAAATAGTTT
TTATGATATCACACTTTGAACTGCAGTATAAAAACAAAATGCAAAATGAA
TACTCTTGTATTAGGTACCCTTTCTCTTTTGTACGTCCTGCATAAATTCT
TACTGTTCCAGTACTTGTTCTTGAGTCTAGAGAATGTGATTGGTCAAACA
ATCGTCGTTTTTTGTTGTTCTTTTTGTTTTCGTTAGAATTCTTAAAAGGG
GAACTGAAGAAAAATATTTTTTAAGTTTTAATATGAAAATGTACATTATT
TTTTCAGTCCAGCAAAGCGAGTGCAGAGCAAGTGTTTCATCTGGTAGAAA
CATGTGAATATAAAGAAGTTTTAGCACGTCTGAAAGAATCGGCGCTCTCC
GGTGAACTTGATAAAGTCGAAGAAACTGCAGAACGATTGGAAAGTGTGCT
TAGTGAAATTTTACAGGTATGTCGATGAGTTAATCATAATAAAACTAATC
TAAAGCACCTGATTGAATGCAAATTTTTTGACTGCCTGGGCTTTTATCAA
TAGCCTTTTAAATAATTCCTTCAAACATGAAAAACAGAAATCCCTTATTT
TCAAATAAAAACTACTATTACTACTCTACCTATTTTACTTCTTTTTATAG
TCCATCCAAGCAATAGTTCAAAATAACTAGAACTGCAATATAAACTACAA
TATATATAAGTACTACCGGGCTACTGAATCGCTCCATCAAGCTCATCACC
AAGCCCTAGTGGCTCAGGCGACGCCAAGTCCGCATGCGATTTTAGGGGGA
TAGGGAGCTGGCAGCTAGTTTATATCTGAAAATCGCATAGACGGTTCTGA
TGAGACAGCTAACTATTTTTCAATCATATTTACCATACAGGTTACCCGGC
TGACAAAAGCCACGAGCAATATAGATGCTTGTATAATCACAGCAACAAGA
TTAGAAGAAAATTTGATCAATCTGATGCCACAGGTTTTTCCATTACTCTT
AGTCATCCCTGTACTGTGACTCCTTACCAACCTCATCCGAAAATCCCCTT
GACACTACCCTCTCTAGCAAAAAGATATTACTTGATCACTGAGCCAGGGT
TTTAAGTTATGGTATTACCAAATAAATACCTCGCTAAAATATTTCTTACA
GTAACCTTTTTCTTACATAAACCTTTTCGACAGTGGAATGATTATTTTGA
ACAAAAAAAAAACCCATTCGATATATTTAACACCCCTGTGTCACAGACCC
GCTGAGGCCCCAGGCCCACTGGAAAATTTGGCAATAATTTTGTCGCCGGT
GGGAAAATGCCCTAGAATTTCAACCCCATTGAGAAATTGACTTTGATGTC
ATCCCCATTCGAAATTCAATGCTTAAAAATTTCACTCCAAAATAATCCCC
ATTGGATTTTTTAATCTTGGAAAATATATAATTTTTATCCCCACTGTGGG
AAAACGTTTCACCAGGACTGTGAGACAGGGGTGTTATTTATTTAGTAAAC
ATCTCTTCCATGTATATGTACCTTGCCTATCAAGGTTGGAGTATTGTAAC
ATTCACGTCATTTTGGTCATCGATTTTCTTCCAGGCCATTGATGCAGGAA
AAATGTTATCAGCACATCCAACAAGTAAAATTACTCAAGAAAATTTTGAA
GTCTTTATTGATGTATGGGATACGCAGGTTGACGAATTACTTACATTACT
GAGGAATATCACCGAAGGTCACACGGAGAGTAAGTCGAAACAATTTCAAA
ATACTCTTCCTTCAAGGCTTCAATTGACTGAGTCTGTTTGTTTTTCCTAG
TCCTTTGCATTTGCGGTTAACATTTGTATTCTAACCAACGTTTTTACGAT
CGACAATTTTCCACAAATTATTCTTATGATTGTATCAACTTTCAACTTTT
GTGATTTTGTAAACCCCATAGAAGACCTTACATAAACCACTATCTTTTGT
AGCACTATCTAGCGCGTTTATATTTACTGCATGCTTTAATGATCTTTCCA
GATAATGAATGGCTTACAATATATATACCAATGGCATCCAAAATAAATTC
ATAATATCTACTTGTTGTTTGTTGATGTAAAATTGCACGAGTATGTATAA
ATATGCACTGTCTTATAATATGTTGCACACACTATTTTTATTAAATTTAT
GCATGCCTGCCCAATTTTTAGCTAGTTTATAATACGTCCTTTTAAAAGTC
CATTCGTTTTAAATACTCACCAATTTTGTTTTGCTCGTCAATTGATTCCA
TAACCAATGCTAAGATTTAACAAAATATGTACCCTTGAAAAGATAATTCA
GAGCACTCATGTAATATTTGAGAAATGGAGTGATGAGAAAAATGAGCGAA
TAGAAGCTTCGTTTTATACCGATGTAAGATTTACCAACACTTTCTTCTAG
AAATGAATTATATGGGATGTTTACACCATTAAAGTGAATTGCAACATAAT
TGATTAACCGTTTAAGTGCCACGGTCATTTTTTAAAGAAAATCGCTAGTT
CAAACTTTAAAGGCTTATATCTCCGGATCTAGAAGAAGTTAGAAGCTCGT
TTTTTTGTCAAACTTTTGCATTTTTTTTTTACTTTTTGGCTTAAAATCTC
GCTGGAAAGACCTACTTTTGATTTTTTTTTTTTGCTTGACCATGAAGTTC
AATCCAATTCCTACGAGTCAGATTTCCAACTCAAACTGGGCATTACAGTC
ACTCCTTCGCCCTCCTTCATAGCCCATGTCTGATATACACGACATTGTCA
CTTAAAGGGTTAAGAGTAACTTGTTGAGACAGGACTGTATAAGGCTGATA
CTCATAATAATTTTGAATCGAACTTTCGTTTCAGGTTGAATTTTTTGCAA
CTCGCAATGACTGACGGTAAATGGCGTTTGATGTAAATGTATTTTTACCA
TTATTTGAAAACTACAAAAGTTCTTTGTAAAATAGATAGGAAAGTCAAAA
AAAGTTGAAAAAAGTATTAGACTATCTTTGGGAAAACTTGGAATCAATTT
ATGAAAACATGGAAACAATCTGTTTTACTGAAAAGTGGACTAACTAAATG
AAATCTAGTTATGCAGCCACCAAAGCACATCAGTGTGAAAACGTTCCAAA
TCATATCTTTGTGCCTTTTTTAATCTCCAAGTTAGGCTATTAAGATTATA
TCTTATTTGCATTTCCTTAGTTCAATTTTTCTTAGAATTTATTTTGGAAA
CACACTGTAAATATTGCAATTTTTGAGCATTAAATTTCACCAGTATTTCC
TTACTTAAAGGGATTGAATTTTAAAAGTACTACACTTCTGTACGAAATTT
TAAAATATGGCGCCTTTTGAGATAATTTTCAATAAAAGTTTACATGTTAC
TTACCAAAGATTTCCGGTATTTTGATGAAATTTAACGAAGTTTTATAATT
TCATCACCGCAAAAGCTGATTTATTTTGAATTTAATGCAAAGTAAAACAT
ACAACATTTGAAAGAAATAATTCAAGTTTGTTTTTTCTTTCCTGTCATAA
TTTCAAGTCAAAATTTTATCTAGGAAAGTTTATATTCAAATTTTGAGCAA
ATTTTTGGAAGCGTAAATTTTGTGGCCCATGTGAGCATTTGGCGTCAAAG
AACTAGATTTCGAATACGTAGAATTCTGAATACCTTTGTAAGTATAGTTT
TAAAATCTTTATTTAATAATTAATTTTTCTTCATTAATGGATGACTCTTT
AAAGATGTAAATAGCATTTTATTTATGAGATGGTCATGTTTTGTTATTTA
GCTTTTGTGTTTCGAACTTGAAGAAAATGAAAATTGAAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043153XLOC_043153Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069260-exon-scaffold_496-1575043694:512957..512996TCONS_00069260-exon-scaffold_496-1575043694:512957..512996Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:512233..512441TCONS_00069260-exon-scaffold_496-1575043694:512233..512441Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:511951..512070TCONS_00069260-exon-scaffold_496-1575043694:511951..512070Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:511568..511657TCONS_00069260-exon-scaffold_496-1575043694:511568..511657Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:510930..511094TCONS_00069260-exon-scaffold_496-1575043694:510930..511094Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:510247..510453TCONS_00069260-exon-scaffold_496-1575043694:510247..510453Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:509532..509606TCONS_00069260-exon-scaffold_496-1575043694:509532..509606Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:509081..509239TCONS_00069260-exon-scaffold_496-1575043694:509081..509239Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:508564..508656TCONS_00069260-exon-scaffold_496-1575043694:508564..508656Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:507818..507962TCONS_00069260-exon-scaffold_496-1575043694:507818..507962Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1575043694:505753..506712TCONS_00069260-exon-scaffold_496-1575043694:505753..506712Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:512957..512996TCONS_00069260-exon-scaffold_496-1510915933:512957..512996Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:512233..512441TCONS_00069260-exon-scaffold_496-1510915933:512233..512441Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:511951..512070TCONS_00069260-exon-scaffold_496-1510915933:511951..512070Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:511568..511657TCONS_00069260-exon-scaffold_496-1510915933:511568..511657Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:510930..511094TCONS_00069260-exon-scaffold_496-1510915933:510930..511094Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:510247..510453TCONS_00069260-exon-scaffold_496-1510915933:510247..510453Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:509532..509606TCONS_00069260-exon-scaffold_496-1510915933:509532..509606Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:509081..509239TCONS_00069260-exon-scaffold_496-1510915933:509081..509239Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:508564..508656TCONS_00069260-exon-scaffold_496-1510915933:508564..508656Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:507818..507962TCONS_00069260-exon-scaffold_496-1510915933:507818..507962Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1510915933:505753..506712TCONS_00069260-exon-scaffold_496-1510915933:505753..506712Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:512957..512996TCONS_00069260-exon-scaffold_496-1491911889:512957..512996Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:512233..512441TCONS_00069260-exon-scaffold_496-1491911889:512233..512441Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:511951..512070TCONS_00069260-exon-scaffold_496-1491911889:511951..512070Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:511568..511657TCONS_00069260-exon-scaffold_496-1491911889:511568..511657Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:510930..511094TCONS_00069260-exon-scaffold_496-1491911889:510930..511094Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:510247..510453TCONS_00069260-exon-scaffold_496-1491911889:510247..510453Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:509532..509606TCONS_00069260-exon-scaffold_496-1491911889:509532..509606Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:509081..509239TCONS_00069260-exon-scaffold_496-1491911889:509081..509239Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:508564..508656TCONS_00069260-exon-scaffold_496-1491911889:508564..508656Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:507818..507962TCONS_00069260-exon-scaffold_496-1491911889:507818..507962Clytia hemisphaericaexon
TCONS_00069260-exon-scaffold_496-1491911889:505753..506712TCONS_00069260-exon-scaffold_496-1491911889:505753..506712Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:505753..512996 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0101483	0	0	0	0.0043877	0	0	0	7.2593e-10	1.91203e-07	0	0.253387	2.66024	3.04202	0	7.12877e-06	2.66195e-06	8.58323e-06	4.60517	3.08025	0	0	0	1.47052e-07	0.0939603	0.120734	9.71678e-07	1.64903e-08	0	0
Blast
[Close]
BLAST of TCONS_00069260 vs. Swiss-Prot (Human)
Match: CTNL1 (Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 4.910e-41
Identity = 143/439 (32.57%), Postives = 240/439 (54.67%), Query Frame = 1 
Query:    1 IGHEMGNANDNIRDDMVESCDATNKACNTIVSM-----LNTDENNNAQEPTSEKT-LSDAAKILLSAITKILILADRTAILKLVKSAAKVNARLEELESVTNFTEFVNAFSQFGGDMVELAYVSGERQNDLRDELQRAEVCAARAILEKSXXXXXXXXXXXXRHPDSPLAKGIRGAVFQSMRDAMTTLKAVIENNECPGKAFCCGISL--DLNNTKEGIEDLLKNPKDYQKMENLIDTVDNINIDMEDLINKENIEDSRKSLLKALIMQSKGLHKNLLEFVEDDQVTEDE---ENIYKTLRELSDICDEMLEESSKASAEQVFHLVETCEYKEVLARLKESALSGELDKVEETAERLESVLSEILQVTRLTKATSNIDACIITATRLEENLINLMPQAIDAGKMLSAHPTSKITQENFEVFIDVWDTQVDELLTLLRNI 1284
            +G  + N N ++++++  +C    +A  TI ++     LN  E++      ++KT +  AA++LLS++TK+L+LADR  I +++ S  KV A +E LE V +F EFV  FSQFG +MVE A++SG+RQNDL+DE ++A++ AARA+LEK TMMLLT  KTCLRHP+   A   +  VF  M+ A+  +  ++ + +  G+     IS+   +   K  IE L +N   +Q  ENL  T++ I   MED  +        +  +  L  Q++   + L+      Q  + +   E +  ++ ++S   +E+ +E    + +    L++      VL  LK + + G L+ + E A +L     ++++  RL +  S  +   IT    EE       Q I A + L+ HP+SKI +EN +VF + W++Q+ ++ TLLR I
Sbjct:   85 VGEAIANENWDLKEEINIACIEAKQAGETIAALTDITNLNHLESDGQITIFTDKTGVIKAARLLLSSVTKVLLLADRVVIKQIITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGDRQNDLKDEKKKAKMAAARAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVFDRMKVALDKVIEIVTDCKPNGETDISSISIFTGIKEFKMNIEALRENLY-FQSKENLSVTLEVILERMEDFTDSAYTSHEHRERILELSTQARMELQQLISVWIQAQSKKTKSIAEELELSILKISHSLNELKKELHSTATQLAADLLKYHADHVVLKALKLTGVEGNLEALAEYACKLSEQKEQLVETCRLLRHISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMSTLLREI 522
The following BLAST results are available for this feature:
BLAST of TCONS_00069260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTNL14.910e-4132.57Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2[more]
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