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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069278 ID=TCONS_00069278|Name=TCONS_00069278|organism=Clytia hemisphaerica|type=transcript|length=1452bp
ATACCTTATCgtccctttttacgccggccctaagttaacgccggcccctt
ttacgccgacCCTTATTCCGCCAGAGACCAATTTTgagcttacgccaatt
agggccgtaaataacgccaaaacttgtaaaaatcttTATTCATGCTTCAA
AACAGCAAATATCAACTTAGATTGGGTAAAAAGGTATATTTCTGAAAAAG
AGACATTAACGTGCTCTTTTCATCCACAAAATTATATGAATAGTTTTGGC
TACTCAACGTCGTTTTATTACAAGTTTCATAAATCCTATTAGCGTAAGCC
TCCCTTATCCTTCAGTAGAAAAGCCTCCTTTAAAGGCCGGggcaaaccag
tccaacattttgaaagtgataatTGCCTTTGTTTTCTTGGTGAAGACACC
Cctatgtcacagacccactaggacaccagccccactggaaaatttggcta
atATTTTGTCCCCGGTTGGCAAAAAACCGAgtttcaaccccactgggaga
ttgactttgatttcatccctattCGAATTCAATGCTTAGAAACTGcaatc
caaaaccatccccactggattttagAACGAAGAATGTCTATCCCCATCGG
GATTTCAATATgaatttttatctccactgaggaaaaaagttgtaAATAAT
TGGTAATTACCATATGCCACGATATGTAAACGTGGCCATTCTTGAAAAAG
AACCGATAATGAGAACCACTTTTGTAAAAATTGCAGGCCAAACGCAGTCA
GCACTCTTATAATTACCGGTATTGAACGTGTTTAGACTGACGGGGGGTTT
AGCAATGGAATGCCAGCCCGCACACTAGGGAATCTTTTCTCTCTCTATTG
TATTTTTGGACAGATTGTTAAAGGAATGAGTTATTTTGGAAAAGATAATT
CAAACCCGGGATAAATGAGTATTTGGTGTATTGGGTATGCGCGAGCAAAA
TACTCTTTCAGAGGTCGAAGTATCTCTAAAGGATATAAAAACCAATTCgg
tcccaaaaatcaaaaaagtatgaaaattcgtttttttccaGGGTAAGGAT
TTTCATAGATTGGGACTAAAataggaaaaattgaaaaaataccctaaaag
ATCCCTAAAATTTCGTAGAAAGTCTCCGTATGGGTCGATTAGAAGTTTTA
TTCGGACCCGCCACCTCGGGGAGACCTTACTAGAGTTGGACGATCCTGGT
TATGTGCGGATCGGCCGTCTTGAAAATGGCCCttggaaaaactgaatttt
ggtgaaaaagtgACCTTAGAGACAAAATTGGCGATAAAGTGACTCTTAAA
Gaaacttgaaaattgaaaatttttctcgactctcgaaaaatatatcaaaa
actCTGAAAAAAGCAACCCATAcataaatttttgactttttcttgttttg
ggTACTCCTTACAGAGGCTTTTGGAATgtgaaaaaccgacccttaccgtc
ca Run BLAST on NCBI transcript from alignment at scaffold_496:1961..3412 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069278 ID=TCONS_00069278|Name=TCONS_00069278|organism=Clytia hemisphaerica|type=transcript|length=1452bp|location=Sequence derived from alignment at scaffold_496:1961..3412 (Clytia hemisphaerica)
tggacggtaagggtcggtttttcacATTCCAAAAGCCTCTGTAAGGAGTA
cccaaaacaagaaaaagtcaaaaatttatgTATGGGTTGCTTTTTTCAGa
gtttttgatatatttttcgagagtcgagaaaaattttcaattttcaagtt
tCTTTAAGAGTCACTTTATCGCCAATTTTGTCTCTAAGGTcactttttca
ccaaaattcagtttttccaaGGGCCATTTTCAAGACGGCCGATCCGCACA
TAACCAGGATCGTCCAACTCTAGTAAGGTCTCCCCGAGGTGGCGGGTCCG
AATAAAACTTCTAATCGACCCATACGGAGACTTTCTACGAAATTTTAGGG
ATcttttagggtattttttcaatttttcctatTTTAGTCCCAATCTATGA
AAATCCTTACCCtggaaaaaaacgaattttcatacttttttgatttttgg
gaccGAATTGGTTTTTATATCCTTTAGAGATACTTCGACCTCTGAAAGAG
TATTTTGCTCGCGCATACCCAATACACCAAATACTCATTTATCCCGGGTT
TGAATTATCTTTTCCAAAATAACTCATTCCTTTAACAATCTGTCCAAAAA
TACAATAGAGAGAGAAAAGATTCCCTAGTGTGCGGGCTGGCATTCCATTG
CTAAACCCCCCGTCAGTCTAAACACGTTCAATACCGGTAATTATAAGAGT
GCTGACTGCGTTTGGCCTGCAATTTTTACAAAAGTGGTTCTCATTATCGG
TTCTTTTTCAAGAATGGCCACGTTTACATATCGTGGCATATGGTAATTAC
CAATTATTtacaacttttttcctcagtggagataaaaattcATATTGAAA
TCCCGATGGGGATAGACATTCTTCGTTctaaaatccagtggggatggttt
tggattgCAGTTTCTAAGCATTGAATTCGaatagggatgaaatcaaagtc
aatctcccagtggggttgaaacTCGGTTTTTTGCCAACCGGGGACAAAAT
attagccaaattttccagtggggctggtgtcctagtgggtctgtgacata
gGGGTGTCTTCACCAAGAAAACAAAGGCAattatcactttcaaaatgttg
gactggtttgccCCGGCCTTTAAAGGAGGCTTTTCTACTGAAGGATAAGG
GAGGCTTACGCTAATAGGATTTATGAAACTTGTAATAAAACGACGTTGAG
TAGCCAAAACTATTCATATAATTTTGTGGATGAAAAGAGCACGTTAATGT
CTCTTTTTCAGAAATATACCTTTTTACCCAATCTAAGTTGATATTTGCTG
TTTTGAAGCATGAATAaagatttttacaagttttggcgttatttacggcc
ctaattggcgtaagctcAAAATTGGTCTCTGGCGGAATAAGGgtcggcgt
aaaaggggccggcgttaacttagggccggcgtaaaaagggacGATAAGGT
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069278-exon-scaffold_496-1491911889:1961..3412 | TCONS_00069278-exon-scaffold_496-1491911889:1961..3412 | Clytia hemisphaerica | exon |
| TCONS_00069278-exon-scaffold_496-1510915933:1961..3412 | TCONS_00069278-exon-scaffold_496-1510915933:1961..3412 | Clytia hemisphaerica | exon |
| TCONS_00069278-exon-scaffold_496-1575043694:1961..3412 | TCONS_00069278-exon-scaffold_496-1575043694:1961..3412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:1961..3412 . |
Blast
The following BLAST results are available for this feature:
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