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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069297 ID=TCONS_00069297|Name=TCONS_00069297|organism=Clytia hemisphaerica|type=transcript|length=1252bp
gtaaattaaaattaaagcaaaatctttttgacataatttaaGGGTTCCAA
GTCTCCCCTCCCCAAGGTTAGGGTACAAAAAGTAGAAATTCAATATCTCC
AGCCAaccttttgtatttttttcatgcCTTTATTAGAGGATATAGTCTGT
AGATTATGTAGTATTAtcatttattattattattattatcattgatgtaa
ataaaGAATACTAAAAAGTTCATATGTTACATTTTATTTAGCTTATCATA
ATTTTCGGGTGTTTTTCCAGCAGCTTTCGAGAGATTCGCTCTTCAATATT
AATAATGACAATTCTATAGAATTCTTTTAATTGAGCTCATAACTCAAGCT
TTTTTTAAAGTGAGGGGTCAGTAGTTTTGTGTAAATTTGCCCATTTTTGT
GTCTGTTAGAAAAAGGAATTGCTTTTGCTGTTTAGACTTGTTTACGAACG
CAAGACTTTTGgagaatttttgtttattttattcatGTTCATAAATCAGA
CggaaatttaatctttttttacaTATATTAGTAGATATTTAATCCAATAT
ATTAattttttaaccatatttttaCGTTTTACTTAAGCTTTCAGGGGAGG
ATATATCAACTTGTTTAACTAGAGgtgatttaaattttaaattgataCAT
GAACTCGCCGTGCTAAAAACGAAATCTCATTTCGACTACCCTACACCAGA
ATTTAACTTACTTCcacggcaatgaattttaaatttctgtGACTATTCTG
GTCCCTTCTTTAAAGCCTATttctagaggcgagactcctgtatgggaaat
gaaaccacctatttcccatccagaacgcccgcgcgtagtttttacacaaa
cgccggattgaaactaaaatctatcgctagatttcaaataATGTAGTCct
tcaaaacaaaggaaccgctagatacaatccgtcgttaTAATTACGGCGCG
TTATATGCGCGTTTTATATAAATAagaagcttcaatttctcttacCTGAA
aaggttaaagtttcgcctctagcccttcgggcttgaaactggttaaaaaa
aaaaggtttctacCCCTGAAAGCAAAAAAGTTCTGTTTTTTCTACattct
tttaattttataaaattGATGGAATCTTATATTCAGTTTTAAAACGTATT
TTTTATCATGGAAAATGTAGTGAGAGAATTATAACATCTTATCACCGTCA
AATAATCAAAGATAATTATTACATATAATAATTATTAATCTTCAGATACT
AT Run BLAST on NCBI transcript from alignment at scaffold_496:307634..308885 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069297 ID=TCONS_00069297|Name=TCONS_00069297|organism=Clytia hemisphaerica|type=transcript|length=1252bp|location=Sequence derived from alignment at scaffold_496:307634..308885 (Clytia hemisphaerica)
ATAGTATCTGAAGATTAATAATTATTATATGTAATAATTATCTTTGATTA
TTTGACGGTGATAAGATGTTATAATTCTCTCACTACATTTTCCATGATAA
AAAATACGTTTTAAAACTGAATATAAGATTCCATCaattttataaaatta
aaagaatGTAGAAAAAACAGAACTTTTTTGCTTTCAGGGgtagaaacctt
ttttttttaaccagtttcaagcccgaagggctagaggcgaaactttaacc
ttTTCAGgtaagagaaattgaagcttctTATTTATATAAAACGCGCATAT
AACGCGCCGTAATTAtaacgacggattgtatctagcggttcctttgtttt
gaagGACTACATtatttgaaatctagcgatagattttagtttcaatccgg
cgtttgtgtaaaaactacgcgcgggcgttctggatgggaaataggtggtt
tcatttcccatacaggagtctcgcctctagaaATAGGCTTTAAAGAAGGG
ACCAGAATAGTCacagaaatttaaaattcattgccgtgGAAGTAAGTTAA
ATTCTGGTGTAGGGTAGTCGAAATGAGATTTCGTTTTTAGCACGGCGAGT
TCATGtatcaatttaaaatttaaatcacCTCTAGTTAAACAAGTTGATAT
ATCCTCCCCTGAAAGCTTAAGTAAAACGtaaaaatatggttaaaaaatTA
ATATATTGGATTAAATATCTACTAATATAtgtaaaaaaagattaaatttc
cGTCTGATTTATGAACatgaataaaataaacaaaaattctcCAAAAGTCT
TGCGTTCGTAAACAAGTCTAAACAGCAAAAGCAATTCCTTTTTCTAACAG
ACACAAAAATGGGCAAATTTACACAAAACTACTGACCCCTCACTTTAAAA
AAAGCTTGAGTTATGAGCTCAATTAAAAGAATTCTATAGAATTGTCATTA
TTAATATTGAAGAGCGAATCTCTCGAAAGCTGCTGGAAAAACACCCGAAA
ATTATGATAAGCTAAATAAAATGTAACATATGAACTTTTTAGTATTCttt
atttacatcaatgataataataataataataaatgaTAATACTACATAAT
CTACAGACTATATCCTCTAATAAAGgcatgaaaaaaatacaaaaggtTGG
CTGGAGATATTGAATTTCTACTTTTTGTACCCTAACCTTGGGGAGGGGAG
ACTTGGAACCCttaaattatgtcaaaaagattttgctttaattttaattt
ac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069297-exon-scaffold_496-1491911889:307634..308885 | TCONS_00069297-exon-scaffold_496-1491911889:307634..308885 | Clytia hemisphaerica | exon |
| TCONS_00069297-exon-scaffold_496-1510915933:307634..308885 | TCONS_00069297-exon-scaffold_496-1510915933:307634..308885 | Clytia hemisphaerica | exon |
| TCONS_00069297-exon-scaffold_496-1575043694:307634..308885 | TCONS_00069297-exon-scaffold_496-1575043694:307634..308885 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:307634..308885 . |
Blast
The following BLAST results are available for this feature:
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