TCONS_00069453 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069453
Unique NameTCONS_00069453
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1504

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069453 ID=TCONS_00069453|Name=TCONS_00069453|organism=Clytia hemisphaerica|type=transcript|length=1504bp
GGtttttataatttaaatttttgctgtATTTGCAAATAAGCAGGTGAAGA
TGTGCCCGGTGCTTAGTCTTAGTCTGGCAAGGGCCTTCTGAAGTTCTGAT
AGAATGAGTTTGCGCATGCGCTCGTCAAAAAAGCGATATTCCTGAAGGGA
GTCTTTTCAACGCGTGCTCGCATTCGGTTAACAGCTGGGGAGGCAAGAAG
AACTTTCTGGAGATAAAGGCCCACTTTCTACTTTCTTACAAGaatgaatc
ctgaaaaattaaagaaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGA
TCtcaaagaagaaagaagaaggtTGTCCACAAAACTGCCACAACCGATGA
CAAAAAATTACAAgtcactttgaaaaaattaagtgtTAATCCCATACCTG
GAATTGAAGAAGTCAACATGATCAAAGATGATGGACAAGTCATTCACTTT
AAAAACCCTAAAGTTCAAGCTTCTCTTGGTGCAAACACATTTGCTGTGAC
TGGACCTTGTGAAAATAAACcTCTTACTGATATGTTGCCAAGTATTTTGA
ACCAAATCGGGGCTGAAGGACTAACGAACCTGCGCAAACTTGCTGAACGA
ATGCCACAAACTCGACTCGAAACTGCCACTGAAAGTGACGACGTGCCAAc
ccTGGTTGAGAATTTCGATGAACCTTCGAAGAACGAAACGACTGCCGAAC
CCGAAGCGACTGCCGAAACGGAAACGAAGAACGAGCCATCTGAATCGACC
GAAACGACCGACGCCAAAATTGAAGAAGTGTCATAGTTTATGTGTAATCT
TTTCTCCagaaacatttttcatatacATATTTTTTCTCCTTCTTTTATTT
TATCGGAATATCTATTTAACCTCTAAAACATTGTCAAGAAGATTTATACG
TGGGAGATTCTTCTCTAGCATTGGGCTAAACTTAGGTGTACAAACTCAAC
GACTTTTAACGATAACGATACTTAACTTTTATCCGTCCGTTTGTTCTGTA
TCTGatacccaaaatgtgatggtgcccaattttcgaaaaaaaaagatttc
cgaAAATTCTGGAAATATGCCTGAAAAACCTTGATTGTAGCAAATCCCGA
ATTGTGACAGTCGCCttttcgagaaaaatattttccggccgaaaatatgT
CGGAAATCGTCGTCTTAAAAGATTTTCATGGGTTTTTtcctaattatttt
tttttcacatcaaaacattgataacattgcccaccatcaagcatagttat
ttgtcaataaaactgatttttgaagccgaaaCTGTTAATTGTCGTTTGTA
TCTTTCGTTTCGAGTGTAAAACTCTACGGGATATCGGCTGCTGAAATATG
CAAAATTTCCATCCTTGGAAAATGTTCCAAGTTTCCAGGTTGGATtatcc
attggattttatctgtgccaatatattatggcactgattgtagaggCTCG
TTTCGAACGATTAATTGGATCAGATGCAAACTTATTTTACAATAACTTTT
CGAG
Run BLAST on NCBI

transcript from alignment at scaffold_50:213722..226840+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069453 ID=TCONS_00069453|Name=TCONS_00069453|organism=Clytia hemisphaerica|type=transcript|length=13119bp|location=Sequence derived from alignment at scaffold_50:213722..226840+ (Clytia hemisphaerica)
GGtttttataatttaaatttttgctgtATTTGCAAATAAGCAGGTGAAGA TGTGCCCGGTGCTTAGTCTTAGTCTGGCAAGGGCCTTCTGAAGTTCTGAT AGAATGAGTTTGCGCATGCGCTCGTCAAAAAAGCGATATTCCTGAAGGGA GTCTTTTCAACGCGTGCTCGCATTCGGTTAACAGCTGGGGAGGCAAGAAG AACTTTCTGGAGATAAAGGCCCACTTTCTACTTTCTTACAAGGTATGATA ACAAAATTCAATTACAATCTTACTTAGTGTCTTCTTTTCATGAGGGGACT ACTCgtgtgttttattttttcataaaaaagatcTCATTTTCTTTTACCGC CCTGACAGCTGATAATTAGGCTAGGCCCACGTTCGTTTGGTTTTACAAAT GCGAAATACagatgtctaaacttttcaataaatcTCTGGAACTAAcagac tttttgaaattctgtaagaAAGTTCAAACTCGTAAATAGTTTTACTATGC TTTGTGGAGAAATCGTAACCATTAGTGAAATACTCATTCATCTAataccg tttaggagtctcgctattttcacggtactccattgcagaggccggtaaaa atggttggtaaaaatgcgcactttagtactgtgaaaggttagaggaatgt aaacattgtgaatttttttctctcctttaaagagaatgatttaAGATATT TGaacatgatatcaatgataattttataagtctctcctgaaaatttcaca aaaattcatcaagaggaaaagaagttatgattaaaaggagttctttacct accgttttctgctatgtttccttatgagaaccagatgtttacctaccgtt tttttacggaggagagtgaattttctgtggtcgctaaaatcaaaacaatg gaaaattggattgacgcgtgcgcagttgacactcctaaacggtgtattaa agattgaagacaaaaatttaccTTGAGCACgaaaaatcaaagtccagacT CCAGGGAATGGAAATCCAAccaatttttttaactgataggtgttcgatta tcgaaccacggaaaatatatattgatccagacgtccgcgctcgataggat cgatcatcggaacggctcgatgacggatcgatatgtgatcgatggattac ttaacttAACGATCCCGATAGGAGAttgatggaagattcagccattaaaa agtcttgagtatcgatccttcgttgatccattatcgagctagtatttcaa tcgagtataccgATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNattcgtcatcgatcgttaatcgattcgtca tcgatcgttaatcgattcgtcatcgatcgttaatcgatttgtcatcgatc gttaatcgatttgttatcgatcgtaaatcgggtatgagtcgataggcata gcgtcagcctgggtttaggtcccaggcaaaatttaggtcccccccaaaga tttatctctttgttagcccccaggaattttgaccctagacaccttcaaaa aattgatccagtaaaaaagttttttccaatgtaaattgcaTTCAGTTCCA AGTTAAGATAAATAACTTTGCACGCTTTCTACAAAAATATTGCGGCGCag gggaaaatttttcagattcatgagcttcaatttgaggaattgaagccaac tattacataggcgtacaaactttcgcgagcagaaacttttgcaaggacga aaaattgcgaaattcacgacatttactttcgcggaTTTAACGGGAAAATa tatttcgcgagcataaactttcgcgaatcaagacgtagaattgagaattt tcacacaaaaaatggcttagagggacaaatacttgttggattggcttgaa acaatTGTCCTTTGACTATTAGTCTTaaagcaggctaaaaagtgacataa aagttacattttattcaaagtttgaagatttACAAATcatctattttgtc aagaatttttcgcgagcataaactttcacgaatagcccttcctagaattt ttaaatacatttactttagcgaaaagggccaaaattcgcgaaaatcgcga aagtttctactcgcgaaagtttgtacgcctaaagtaagctgaattatttt agcccccactttgagtgatgagattttagcccCCCCAAGTACATCCCCCT AAAAAGTGGTGTACTTATagccccctccttttttgggaaaaatttagggT GTAACCCCCTCCCCCAACCAGCAGGGGGGTTGACGCTATGATAGGTTCGa taagatcgatgatagattgataaataagcaataactaatcataagcttta aaaaatcttgagtatcgatcctctatcgatctcctatccggatcgttaag taatccatcgatcacatattgaTCCGTCATcaagccgttccgatgatcga tccgtcatcgagcacGGACGTCTGGATTGATTAGTTCAATAAAAGTACAG TTTCATGTATATGTTCAAGTTGTTCGAAGAGTGTTCGAGCAGTATCTTAT TGCTTTTCTGGGATCATTCTGCTATTTTTCTCAGGTATACTAGCCAAGAT ATTGTGAAAATGACGCACCAAAGCTTCTTGGTTCGATTAAGTTCTGTAAT ATTGTCACAAGTCAATAATtatcgtcaactgctctaactttggactatct gacaaaacatggggcggtcattcagccaccatttcaccgaacctccaaag tcatttaattaacatacTGCGAATCGTAGATAGCAAATAATGCGAGTATG CTACTCGCACCAGGTAGGCTTTCACACCGCAAAAGTAACAAATCTTTTCA ACGAGAAACATGTAATGTAAATGCAACCACACACATTCCTGCAAGCGTCC AAACATTTCGCAGAcaatatcatccaccaggatacaagtgaaaattttca atctacCGACTTACTCTTGGGTACCATAGCTGTAAcccccaggacattct tattccaaaccAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNttattccaaaccccccccccccccccccgcttattaatttttgggg aaatgtttttgaaagttcctcGCTTTTGTCCTTGCTATATTagcctcttt ttcaaaaaatttccacccatgacacttttattccaaccctgcttattaag ttttgagagtTTTTCCAATCCCCCAGCTTATTCCAATCACctcggctatt aggtacccgagagtagatgGGGGTTTAGTTATTATCATGGTAGGGTTCGG GGTGGAGCTCAAGATAACAATATAAGGGGGCATTTGTGAATTAAGACTTA ACTTAGGATCCCATAGGGGTCTTTGTAGGGGCACCAGTAGGTTTGGGAGC TGTCTTAATTAACGTCTGTAAATTGCACGCTGTTACACGCTATAAgaatt tgtgaatgacagctttCTGTTGTGTCTCATTGGGCCAAcccgaaaaaaat tttgtttccgTTCCACCTGGTGATGAAAAAACACTCACCTGGCCAGccgc aaaataatttttttttgctaaatttcaatcccaaaactcgattttttaaa gcactcgttagaagttaaaatgatggtcttctttaccttaaatctgtagt aacttgacactgctacaggcttcggcataagaaaaattcacgtgtgatca tcccacgcctagattttgatttatagtggTCTAGGCGTGCAAATACTTAA CTTTTatcgtttatattttcaattgtgttACAATATCTCTAACAGGGCTc aaaataacggtcggacataggacattgtccgacccaaatggcttcatgtc cgacccaaaaatcataatttttaagctaaagcaaccctgatcggacattt tgtccgacccacttgaaatggttatttcgagccttgctctaagaactgga cactctttcattttgaatatttatcttcaattgCTTGAGGCTCCAAACTG TGATTACGAAgggaacttttttgagaaaaaagtagagtgagggaaacatt tccccaattttttaaatcctcactttcttaatgtttctttttattttact cacaagtcagtatgattccttttataaaaacaaagctgtttacttactga aaagtccccactttgtgaatgtttctatttattttactcacaaatcagca tgattctttataaaaaccaagttgtatattaaaaaaacattcttaaaagt tgagttgcaagcaagaattaacaaaaacaatgcagggtttagtttgagat gaataaaatttcatttctataacaTTGATCAGGATAAAACCTTCATTCAA AGTGGTTTCAAGGCGTGCATTTTAcagtagaatataaaatatcacgtgcg ataaactaaccctaaccctaacgatGATTACGAAAAAACGCGGCCGGGTG ATAAAGAAATAgattttcacccggccggtggacgggaaacaaaaactttt ttcggGTTCGCCTTGGCACAAGCGGATAGGCAtagggtttgtaaaccaag gttgcttgcatttggtggtttgAGCCGGGGTCAGAGACCTGTACGGGCAA ATCtcagaaaaatatttagaaaacagttagaaacacttgagaaagtcaga aaatcaggatagaagacaCAAAAGTAGTAAATAGGGAGGAAATAggagag gatgcatcctggtggatgatatcgtttgctaaCCTGTCCAAACACAGATA TAAAAAAGTCCTGCAgaaaattgtgagatctgttaTCAAAACTCTGTaac tttgatttgaaatttgaatgtcaatcaatcgTGCACGCTAGAAAAAGTCT CTAAGAGAAAAATGACACAAAAAATGGCGTCAAGATGTGAGCAGCGTGAG TGAGATTGAATTGTTACTCTCCAGTGCCTAATAAACGTTCAGACCAAAAT AAACGCACAGGGGGGGGggataaaattgaaattaataaacgtacaggcaa gaaatcagagctaaaataaataaaagtacaGGGAAAATCTACCAATTTCT CAAAAGTAGAGATCAAATTAAACGCTCAAATTTTTAGCAAGACTTAGAGT TTACTCGCAGCATAGCATTCGAAATCTCCACACTTCGTTTGAATGTAATT AAAGGCCTTTTTACACGTCTTATTTTTTCCAGTGAATCAGGCAATATTGG GTCAGAGAAAATAAACATACTGCAGGAAAATtcctcaaaataaataaaca tacaGGTCTtaataaggtgcgtacaggcgggaaatttgactAGGCACCAA GAGTAATTACTtcttcaaattatgtactttttAAAGcgctttaaaaatac atttgatTGTGATTATGagatggtgaaagtttgattgatgaGCTTTTTGA AgtatcaaaactcaaaaaaagaagatacaCTCCAGAAATCAaccgtccca agttagagcagttaacGGTACGGTTTGTGTATGATTAAAACTAAGAATTG ACCGTGAATTTCCAAACNccaaaaacccccccccccccccctgcagaGTG GGGGGTGCACACTAAGAACACCCTTACTCTTTGAGTCCTCCCTTTACATT TCCATCCAAGTGGctgtagcatgaaggtagagcatccagctacagTGCAA GGTTGTGTGTTCGATCCccagctgggtcataccaaagattcccaaaatgg tacttgatgtctctctgcttgatgcttagCAACTAAAGAGAtagatcaag ggtaagtggagaaatccagggaaaggagtggtgccctctcctaccttcgg gtagacagctatagaaaagggagccttcagGTCGCCCTCAACTGTGGTCT CAAACTTACTTTACTACTTCTATTTTCTTGGCAAATATTGCCCCCACCCT CCCCTAAGTTGGCATCTTCAATGCATCacaataaaatatctaaaagttGT ATACCTATATATTATACTACAATTATGTGATGGTCAACTTAGTGTTAGTG TTTTGAGTACTCAGGTGAAAGCAGCAGTCTAAGCTCGCCTACCCGCGCAG CACTGATGAAGGGAAATCCTAGGAAgggcaaaaaaaatcaattaattcaa aataattgaaaaacagGTATTATGGTCCTTGTgcaaaaaaaagattaatt taCCATAATAGGTGAAGCACATTCACCTTAAAATTGTTATTCTTGTGGTT TGTGAGATTAACATGTGACTTCATCAGCATTAAACatacaattttatttt aacagaatgaatcctgaaaaattaaagaaactcCAAAATGAAGTCCGAAT TGGAGGAAAAGGATCtcaaagaagaaagaagaaggtTGTCCACAAAACTG CCACAACTGATGACAAAAAATTACAAgtcactttgaaaaaattaagtgtT AATCCCATACCTGGAATTGAAGAAGTCAACATGATCAAAGATGATGGACA AGTCATTCACTTTAAAAACCCTAAAGGTCAGTGAAAGCAATTACAACTTC AAATGAAACCAATGGGACAAACAGTGTCTCTAATTGAAACAttttaatgt aatgtaatgtgcCATTAAATTTTATggccatacagggggggggtggacga atatttccagggggtaaaccGATAAGaaattccagggggtctaaaaagaa atgttttttcatttttccaggggtgaacaactgattttagttcatccacc ctcactttaagacataaaaagaattttttccaagggttcttttacaaatt ttgccattttccagcaGGTATCTAcacttttaaagaaatttgttttCGCT TGAAAAGGTTTGTCCGCCCCCctttatggaaattttatggaacagcccaa tgttGATTTAACATTTTGCTTCAGAGGGATGTAACTTTCTTactgttttt catttttgaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCATAGTGTGCAGGGGGGGTCAAGGTCCCACCTAA AATTTCAGGTCCCAGCACTTGAGAAACTCCCACCTGATAGTTGACTTTCC AAGTCCCACCTAAAGTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCCCCCCCCCCTGCAGAGTGGGGGGTGCACACTAAGAAC ACCCTTACTCTTTGAGTCCTCCCTTTACATTTCCATCCAAGTGGctgtag catgaaggtagagcatccagctacagTGCAAGGTTGTGTGTTCGATCCcc agctgggtcataccaaagattcccaaaatggtacttgatgtctctctgct tgatgcttagCAACTAAAGAGAtagatcaagggtaagtggagaaatccag ggaaaggagtggtgccctctcctaccttcgggtagacagctatagaaaag ggagccttcagGTCGCCCTCAACTGTGGTCTCAAACTTACTTTACTACTT CTATTTTCTTGGCAAATATTGCCCCCACCCTCCCCTAAGTTGGCATCTTC AATGCATCacaataaaatatctaaaagttGTATACCTATATATTATACTA CAATTATGTGATGGTCAACTTAGTGTTAGTGTTTTGAGTACTCAGGTGAA AGCAGCAGTCTAAGCTCGCCTACCCGCGCAGCACTGATGAAGGGAAATCC TAGGAAgggcaaaaaaaatcaattaattcaaaataattgaaaaacagGTA TTATGGTCCTTGTgcaaaaaaaagattaatttaCCATAATAGGTGAAGCA CATTCACCTTAAAATTGTTATTCTTGTGGTTTGTGAGATTAACATGTGAC TTCATCAGCATTAAACatacaattttattttaacagaatgaatcctgaaa aattaaagaaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGATCtcaa agaagaaagaagaaggtTGTCCACAAAACTGCCACAACCGATGACAAAAA ATTACAAgtcactttgaaaaaattaagtgtTAATCCCATACCTGGAATTG AAGAAGTCAACATGATCAAAGATGATGGACAAGTCATTCACTTTAAAAAC CCTAAAGGTCAGTGAAAGCAATTACAACTTCAAATGAAACCAATGGGACA AACAGTGTCTCTAATTGAAACATTTTAAtgtaatgggccattccatttca tGACCATACTGGTGGGTGGACgaatatttccagggggtctaaagaagtgt ttttcatttttccagggggtaaaaagttattattAAATTTCCAGGGGTGA ACaactgattttagttcatcCACCCTCAATTTAAGAGATGAAAAGAATTA TTTCCAAGGGTTCtattgcaaattttgccattttccagcaGGTATCTACA CTTTCCGataaatttgttttcaattGAAAAGGTTTGTCCGCCCCCcttta tggaaattttatggaacagcccaatgttGATTTAACATTTTGCTTCAGAG GGATGTAACTTTCTCactgtttttcatttttgaaagtttcgaaatttatg AACTGCCATTTTTTGAACAGGCTTTGTTTCGAAGCTACTGCGTGATTGAT AGTTTTGTGTTTGAATGTGATTTATATTTTCCATGTTTTATCATCTATTC AGTTCAAGCTTCTCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTG AAAATAAACGTAAGTTGTTTTAATATACTTCTAATGTTTTATCTCTGTAT GGTTGCAAAGTTAGAGGGGACCACCAGTTAACTATTATGATTATAGCTTG TTTTCCTTTCGTCCAGCTTTAGTCGCTTTAATGGTAGTTTTAATCTGAAA GCATCAAGATGATTtaaatgttttacttttttcagcTCTTACTGATATGT TGCCAAGTATTTTGAACCAAATCGTAAGTACTTTCTGCTTCAGTTTTTTC TGTGCAAATCATAATTTCCATTGAATTACTGGGTAGTTTGAAAACCATGT AAGAAGTAGGAATTAACTCCTTGTATTTTGTATTGTCTCTGTTTCCAGGG GGCTGAAGGACTAACGAACCTGCGCAAACTTGCTGAACGAATGCCACAAA CTCGACTCGAAACTGCCACTGAAAGTGACGACGTGCCAAGTAAGTACCTT ATTTTCCGATCCAATCTTTATGGACTCGAGTTAtatcatggaggtaataa aaaaattggagagtcaatgccttttgttctattctgatttatcatcggaa gcaaacagctttttggttgctttgggaataagatgattaattttgggtat actcgtgggaataattaagatgaatgaaaagacattacatttttaacaag tatattgacatacaatagccttgtcatgaaaaattgaaaaaaacttcata taataagcacaatactccaaacCTCTAGgagaagctgcccataaagccat cgatagatttaaaacagaattacgtgttacgattaggaaccttgtatcga tcattttgtcagagtatgaaaaccgctgcccacttagacgtgaagatttt aagataagaaatttcaatgataatgtgatgcaatTCTCATTgttaacaaa atgccagcccaaaaatgtgtccttatgaaattaatatactcttttagtct tacatcagttgaaactatttcgaatcgcattttaagagggcttttcggca aaattaagttttcaaaatcaaccaaaaggtctctttatgttcttataaag ttataaattgatgttttttgcttccaatgatggtacatcaaagaaaagcc gctttgaatagatttataaaagatttcaacgaccatttagatcattaccg agacgttttctctccatctatatctttattaattattaattacCTCCATG TTTATATATCATTGAGTTTTGTAAGTTCACCTGAATTTGCCATGCACAAA TGATCAAGTCGACTTTAAATAAGAATTTCGTTTAACGTCGCTCTTTGCTG ACCGAATATTTATTTActtgaaatgaaattgtcacGGCCAGAGACCTACC GCCTAAACTACGCATATGTGCTTATGTCATAAAGTTAAACATCATTAGCT GTTTGTTATCATTGAGTTCTTAGTCCTGAAGAGAGCTTGCATCTCCAGTC TTTGAAAAATGTCTTGCGTTTCAAGGTCCATGTATTGAACCAGTTTGGAA ATAGCAAATCTTATTGAGCAGctttttaatttagaaaattataTTTGGGT GGTTTTACTTCGAACGCACAAAACATATCGAATGAATAGTGGTCTTTTTT CACAAGGAACCTTTCGGTCTAAATTCAGCAACATAACATTGTTCTGATTT TGAAGGTAACTCTACCTGGCTATGTTGCCTTGAAATCAATCAAGttattt actttcattttcagcccTGGTTGAGAATTTCGATGAACCTTCGAAGAACG AAACGACTGCCGAACCCGAAGCGACTGCCGAAACGGAAACGAAGAACGAG CCATCTGAATCGACCGAAACGACCGACGCCAAAATTGAAGAAGTGTCATA GTTTATGTGTAATCTTTTCTCCagaaacatttttcatatacATATTTTTT CTCCTTCTTTTATTTTATCGGAATATCTATTTAACCTCTAAAACATTGTC AAGAAGATTTATACGTGGGAGATTCTTCTCTAGCATTGGGCTAAACTTAG GTGTACAAACTCAACGACTTTTAACGATAACGATACTTAACTTTTATCCG TCCGTTTGTTCTGTATCTGatacccaaaatgtgatggtgcccaattttcg aaaaaaaaagatttccgaAAATTCTGGAAATATGCCTGAAAAACCTTGAT TGTAGCAAATCCCGAATTGTGACAGTCGCCttttcgagaaaaatattttc cggccgaaaatatgTCGGAAATCGTCGTCTTAAAAGATTTTCATGGGTTT TTtcctaattatttttttttcacatcaaaacattgataacattgcccacc atcaagcatagttatttgtcaataaaactgatttttgaagccgaaaCTGT TAATTGTCGTTTGTATCTTTCGTTTCGAGTGTAAAACTCTACGGGATATC GGCTGCTGAAATATGCAAAATTTCCATCCTTGGAAAATGTTCCAAGTTTC CAGGTTGGATtatccattggattttatctgtgccaatatattatggcact gattgtagaggCTCGTTTCGAACGATTAATTGGATCAGATGCAAACTTAT TTTACAATAACTTTTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043287XLOC_043287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069453-exon-scaffold_50-1491911889:213722..213963TCONS_00069453-exon-scaffold_50-1491911889:213722..213963Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:213722..213963TCONS_00069453-exon-scaffold_50-1510915933:213722..213963Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:213722..213963TCONS_00069453-exon-scaffold_50-1575043694:213722..213963Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1491911889:223458..223678TCONS_00069453-exon-scaffold_50-1491911889:223458..223678Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:223458..223678TCONS_00069453-exon-scaffold_50-1510915933:223458..223678Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:223458..223678TCONS_00069453-exon-scaffold_50-1575043694:223458..223678Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1491911889:224224..224280TCONS_00069453-exon-scaffold_50-1491911889:224224..224280Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:224224..224280TCONS_00069453-exon-scaffold_50-1510915933:224224..224280Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:224224..224280TCONS_00069453-exon-scaffold_50-1575043694:224224..224280Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1491911889:224457..224494TCONS_00069453-exon-scaffold_50-1491911889:224457..224494Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:224457..224494TCONS_00069453-exon-scaffold_50-1510915933:224457..224494Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:224457..224494TCONS_00069453-exon-scaffold_50-1575043694:224457..224494Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1491911889:224620..224710TCONS_00069453-exon-scaffold_50-1491911889:224620..224710Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:224620..224710TCONS_00069453-exon-scaffold_50-1510915933:224620..224710Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:224620..224710TCONS_00069453-exon-scaffold_50-1575043694:224620..224710Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1491911889:225986..226840TCONS_00069453-exon-scaffold_50-1491911889:225986..226840Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1510915933:225986..226840TCONS_00069453-exon-scaffold_50-1510915933:225986..226840Clytia hemisphaericaexon
TCONS_00069453-exon-scaffold_50-1575043694:225986..226840TCONS_00069453-exon-scaffold_50-1575043694:225986..226840Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:213722..226840 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
784.829 771.794 589.976 620.43 432.96 363.498 369.105 419.647 434.302 374.673 489.395 495.244 605.931 621.904 735.949 729.833 689.395 749.752 461.288 507.006 734.817 716.727 876.787 773.55 339.511 360.473 750.102 851.213 560.577 602.629
Blast
BLAST of TCONS_00069453 vs. Swiss-Prot (Human)
Match: BT3L4 (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.754e-61
Identity = 105/153 (68.63%), Postives = 121/153 (79.08%), Query Frame = 1
Query:  244 MNPEKLKKLQNEVRIGGKGSQRRKKKVVHKTATTDDKKLQVTLKKLSVNPIPGIEEVNMIKDDGQVIHFKNPKVQASLGANTFAVTGPCENKPLTDMLPSILNQIGAEGLTNLRKLAERMPQTRLET--------ATESDDVPTLVENFDEPS 678
            MN EKL KLQ +VRIGGKG+ RRKKKVVH+TAT DDKKLQ +LKKL+VN I GIEEVNMIKDDG VIHF NPKVQASL ANTFA+TG  E KP+T+MLP IL+Q+GA+ LT+LRKLAE+ P+  L++          E DDVP LVENFDE S
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153          
The following BLAST results are available for this feature:
BLAST of TCONS_00069453 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BT3L43.754e-6168.63Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
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