|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069523 ID=TCONS_00069523|Name=TCONS_00069523|organism=Clytia hemisphaerica|type=transcript|length=983bp
GGCCTGTGACGTTCGCAATTATTTGATGATCAATATAACTATCATCAATG
GAGCTCGAGCCTCAAATCTTATGAATATTTCGTTGGGGGATATCGCCAAA
GCGGCCCCAACAACACCTGAAGACGGTTTTTGTGGCTTTGAATTCAAGTC
CTCCAAGTACAAGACATGTATCATTTACGGAGATAAAGTGATGTGGGTCA
ACAGAGAATTATATGATTTTATTAACGGCTACATTGAATTCATCCGTCCC
CTGATCGCCCCAGCAGACTCCAAGCTCTTATTTACAAGCTCCTCGAAGAG
AGCCGAGGTAcaacaaaatgaagaagaagaagaaaaggatccTGGGCTCA
TGGAACATCCCATGATTTCATCTGCCTTCAGTCGTTCGTTCCAGAAAGCC
GGTGTATTCCAATCAAGTGACAATACCAGAGTTCCCCGTCCCGCCTCCGT
TGCGCTGCATGCACGGAGCTTGTTGGCGTGGACGGCGAAAACAGCGACAA
TGTAGCTCTGCATTATATGAAGCACAGGTATAAATTCAATTTCCGTTTGC
AATACTTGCCTCTGTCTGTTCTTTTTATCAACCATCTCTGTCCGAAGGGT
GAATGATGTGTTCTAGTCTGAATTAAAATTCGGGATACGGTACAGTCTGT
GTTGATATCAATTCATAATTCtctatttatttttgattggcaggtttaga
tttttttaatcaatttgtCATTCATGTATTTTTTGCTTCTACAGACCCGG
TACATCACACCAATACTATACAGCCTATTGGGAGAACAGGGAAGCGTTGC
GCATCTCGATGAAGTGTTACTCAAAGTTCCTGCCCGGCAAAGAAACGGAG
AGAATCGTGGCCGATCGAAACAGAATGTTATCTCAACAGAAACCACCATC
GAAAAATGATATGAAGAAATGGTTTAATAACTTGGCCAAGCTGATACAGG
GCTCCACCGGAAAGAAATACACCGACGACCGAC Run BLAST on NCBI transcript from alignment at scaffold_502:87445..88427+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069523 ID=TCONS_00069523|Name=TCONS_00069523|organism=Clytia hemisphaerica|type=transcript|length=983bp|location=Sequence derived from alignment at scaffold_502:87445..88427+ (Clytia hemisphaerica)
GGCCTGTGACGTTCGCAATTATTTGATGATCAATATAACTATCATCAATG
GAGCTCGAGCCTCAAATCTTATGAATATTTCGTTGGGGGATATCGCCAAA
GCGGCCCCAACAACACCTGAAGACGGTTTTTGTGGCTTTGAATTCAAGTC
CTCCAAGTACAAGACATGTATCATTTACGGAGATAAAGTGATGTGGGTCA
ACAGAGAATTATATGATTTTATTAACGGCTACATTGAATTCATCCGTCCC
CTGATCGCCCCAGCAGACTCCAAGCTCTTATTTACAAGCTCCTCGAAGAG
AGCCGAGGTAcaacaaaatgaagaagaagaagaaaaggatccTGGGCTCA
TGGAACATCCCATGATTTCATCTGCCTTCAGTCGTTCGTTCCAGAAAGCC
GGTGTATTCCAATCAAGTGACAATACCAGAGTTCCCCGTCCCGCCTCCGT
TGCGCTGCATGCACGGAGCTTGTTGGCGTGGACGGCGAAAACAGCGACAA
TGTAGCTCTGCATTATATGAAGCACAGGTATAAATTCAATTTCCGTTTGC
AATACTTGCCTCTGTCTGTTCTTTTTATCAACCATCTCTGTCCGAAGGGT
GAATGATGTGTTCTAGTCTGAATTAAAATTCGGGATACGGTACAGTCTGT
GTTGATATCAATTCATAATTCtctatttatttttgattggcaggtttaga
tttttttaatcaatttgtCATTCATGTATTTTTTGCTTCTACAGACCCGG
TACATCACACCAATACTATACAGCCTATTGGGAGAACAGGGAAGCGTTGC
GCATCTCGATGAAGTGTTACTCAAAGTTCCTGCCCGGCAAAGAAACGGAG
AGAATCGTGGCCGATCGAAACAGAATGTTATCTCAACAGAAACCACCATC
GAAAAATGATATGAAGAAATGGTTTAATAACTTGGCCAAGCTGATACAGG
GCTCCACCGGAAAGAAATACACCGACGACCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069523-exon-scaffold_502-1491911889:87445..88427 | TCONS_00069523-exon-scaffold_502-1491911889:87445..88427 | Clytia hemisphaerica | exon |
| TCONS_00069523-exon-scaffold_502-1510915933:87445..88427 | TCONS_00069523-exon-scaffold_502-1510915933:87445..88427 | Clytia hemisphaerica | exon |
| TCONS_00069523-exon-scaffold_502-1575043694:87445..88427 | TCONS_00069523-exon-scaffold_502-1575043694:87445..88427 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_502 | supercontig | scaffold_502:87445..88427 + |
Blast
The following BLAST results are available for this feature:
|
