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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069573 ID=TCONS_00069573|Name=TCONS_00069573|organism=Clytia hemisphaerica|type=transcript|length=725bp
gtcccgacTGGCATTGGAACCCTTAGAAGAGGAATTGAAATCGGGAGGCA
AGCCGAAATTGGTGTCGCTACAAAAAGGATACCTGTAAAAGCGGATCATC
TCTGTACCTTTCATTAGTCTAGGTATCCCCGGTGTAGCTTAACCCCCTGC
AAATGTTGACTCTTCTAATCAAAATTAACAAGGACCCGTAAATCTGTACA
TCCAGTGCCCTTTTAGCGTTCCATTAGAAGATCAAGAAAGATCGAGGAAT
GGTTAAATCTATAGACTGAACAATAGCCTAGCAAACAGAGAGAGAGTTTT
CGAAACATCAAAGAAACTTTAAACCATGAGGTGTGCAATTTGAATGCAAA
AAACCTACATTTGATTCCTCGTCTTCTCGAGTTGGCTCCAAAGAACTCGT
GGATCCAAATGGCATCGGAGGTGGCACTGCTTGCGGCCGCGGGCTCGCTT
GGGGTGGTAACGTTTTAGAGGACTTTTGCGGAATAGCTGGAGCTTCTTCA
TTTTGTAGCTGTTGTGATGGCAAGGGTGGTTTGGGCGGTAAAACTGGCGA
ACCTTTCGCATTGCCCCTATAAGGTCTTGGCGCAGCTGGCATGTTGGGTG
CACGTCTTGGGATTTCAAGAGGTGGTTGTGGACTGACGTCACGTGATGGC
ATATTGGGAATTGTATCGTAGCCTTGACGTGGTGAAGGCGATGGACCCTT
CGGTGGTAATGGTGCGGGTAGCTGA Run BLAST on NCBI transcript from alignment at scaffold_502:9247..10034- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069573 ID=TCONS_00069573|Name=TCONS_00069573|organism=Clytia hemisphaerica|type=transcript|length=788bp|location=Sequence derived from alignment at scaffold_502:9247..10034- (Clytia hemisphaerica)
GTCCCGACTGGCATTGGAACCCTTAGAAGAGGAATTGAAATCGGGAGGCA
AGCCGAAATTGGTGTCGCTACAAAAAGGATACCTGTAAAAGCGGATCATC
TCTGTACCTTTCATTAGTCTAGGTATCCCCGGTGTAGCTTAACCCCCTGC
AAATGTTGACTCTTCTAATCAAAATTAACAAGGACCCGTAAATCTGTACA
TCCAGTGCCCTTTTAGCGTTCCATTAGAAGATCAAGAAAGATCGAGGAAT
GGTTAAATCTATAGACTGAACAATAGCCTAGCAAACAGAGAGAGAGTTTT
CGAAACATCAAAGAAACTTTAAACCATGAGGTGTGCAATTTGAATGCAAA
AAACCTACATTTGATTCCTCGTCTTCTCGAGTTGGCTCCAAAGAACTCGT
GGATCCAAATGGCATCGGAGGTGGCACTGCTTGCGGCCGCGGGCTCGCTT
GGGGTGGTAACGTTTTAGAGGACTTTTGCGGAATAGCTGGAGCTTCTTCA
TTTTGTAGCTGTTGTGATGGCAAGGGTGGTTTGGGCGGTAAAACTGGCGA
ACCTTTCGCATTGCCCCTATAAGGTCTTGGCGCAGCTGGCATGTTGGGTG
CACGTCTTGGGATTTCAAGAGGTGGTTGTGGACTGACGTCACGTGATGGC
ATATTGGGAATTGTATCGTAGCCTTGACGTGGTGAAGGCGATGGACCCTT
CGGAGTTGATGATGAGTACAATTATTCATTGATAAAATCAATACTNGAAG
GCGATGGACCCTTCGGTGGTAATGGTGCGGGTAGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069573-exon-scaffold_502-1575043694:9348..10034 | TCONS_00069573-exon-scaffold_502-1575043694:9348..10034 | Clytia hemisphaerica | exon |
| TCONS_00069573-exon-scaffold_502-1575043694:9247..9284 | TCONS_00069573-exon-scaffold_502-1575043694:9247..9284 | Clytia hemisphaerica | exon |
| TCONS_00069573-exon-scaffold_502-1510915933:9348..10034 | TCONS_00069573-exon-scaffold_502-1510915933:9348..10034 | Clytia hemisphaerica | exon |
| TCONS_00069573-exon-scaffold_502-1510915933:9247..9284 | TCONS_00069573-exon-scaffold_502-1510915933:9247..9284 | Clytia hemisphaerica | exon |
| TCONS_00069573-exon-scaffold_502-1491911889:9348..10034 | TCONS_00069573-exon-scaffold_502-1491911889:9348..10034 | Clytia hemisphaerica | exon |
| TCONS_00069573-exon-scaffold_502-1491911889:9247..9284 | TCONS_00069573-exon-scaffold_502-1491911889:9247..9284 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_502 | supercontig | scaffold_502:9247..10034 - |
Blast
The following BLAST results are available for this feature:
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