TCONS_00069779 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069779
Unique NameTCONS_00069779
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2682

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069779 ID=TCONS_00069779|Name=TCONS_00069779|organism=Clytia hemisphaerica|type=transcript|length=2682bp
TTCAGCTAATGAAcaaagaattttaaaacatCTAAATGGAAGTAGACAGC
CACCAAGATGATCATCAATTATTGGATTGGGAAGCCAAACTTTTCCTGGA
AATCATGGAAGATGATGGACTGCTTGTGTTAGCTAAAGGACTTGGCCTTG
ACCgtatgtttttgaaagttgttCAAACATTTTGTAAACAAGACAATTTG
GTTTTTGTACTCAATACCATTCCAGAAGAACAGTTCCATTTCCTTAATGA
ACTCAGTGCACTTGATGTTAAACATTTACCTAAAGTAATTTCAGATAGTT
CAGTTGAAGAACGTCGACAACTTTACCTCCAAGGAGgtgttttctttgtt
tcatcaaaaatatTGGTCATGGATATGCTTACTAAGAGAGTTCCAATTGA
TTACATTACTGGTATTTTAGTAACACGTGCACACAAGATAGCAGAATCAA
GTCAGGAGAGTTTCATTTTGCGGATGTTTCGTGAGCACAACAGTGATGGG
TTTATCAAAGCTTTCAGTGACATACCAACTGCTTTCATGGCTGGGTATTG
TCAAGTGGAACGTGTGATGAAATTGCTTTTCATAAGACATCTCTTTTTAA
GACCACGTTTTCACAATGAGATTGCTGCTTGCCTTGAATTACATAAACCT
GATGTTATTGAGGTGAACATTGAAATCACACCAAAAATGAGAGCTATTCA
ATTGTCTTTGTTAGACTTGCTGAACATCTCCTTGCGTGAATTGAAGAGAG
CTGTACCAAACTTAGATCCTGATCACTTCACTTTGGAGAACtccttaaat
agaacttttgaTCGCATGTTAAAAGTTCAATTAGATTCAGTCTGGAATGA
GTTGGCAAACAGAACAAAAGAACTCGTTTCTGACATTCGGGTTCTTAGAA
CTTTACTCTCCTACCTTACTCAGTATGATTGTGTGACATTTTATAACTTT
CTTGAcactttaaagaaaaatgagaaaaataaaaagagtATGTGGATGTT
GACTGATGCCGCTAACACTGTTTATGTCAATGCAAAAGAGCGAGTGATGG
GAGTCCCTGAGAAAGATAAGAAAggaaaagttgttaaaaaggGCAAACCA
GAGCCTTGTCCAAAGTGGGAAATCCTCACAGAGATCTTGGATGAAATTGA
GAAGGAAAAGGTTAATCAGGATGAGAAAAAGGTATTGGTTTGTGCGGTTG
ATGACCGAACTTCTTATCAGCTGAGTCAAGTTCTATGCCATGGTATTGAT
AGTTTCTTACAAGGGCAATATGAAAGGAGTGCGCTTTCAACCGGCTATCA
TAGTGGCTCTGCTGAAGAGACTGATAGCGACTTTTCAATGAACTTTAGCA
AATTTTCTGACAATGAAAAAGCAGGTGACAAAGGCAAATCAGATGAGGAA
GATAACGATAGCAAATTTTCACTTGATTTGAATACCAATCCTCTCATCAT
TCATTCGTTACATGGCAGTGCAGACCATTACAGTTTGTTCCAAACACTCT
ATGAATTTGAACCAACTTATGTTGTTTTGTTTGATGCATCTGTTGAATTT
GTTCGTCAACTTGAGGTATTCAAAGCGTCTCGACCAGGAATACCTCTTCG
AGTATATTTTCTCTTCTACAGTAGTTCCATTGAAGAACAACGCTATTTGA
CATCCTTGCGCCAAGAAAAAGATGCATTCGAGCTTTTAATTCGTCAAAAA
GCTGACATGGTTATTCCAGAGGAACGACAAGCCAAAACACAAGCAGCTAA
GAGTAGTCTTCGAGATGCGTCCAAAGCTTCTGCTACCGTTGTAAGCTCTC
GTAAAGCAGGCGGACGAGATGTTCAAAATGCGAAAACCCGCAACATTGTG
GTTGATATGCGTGAATTCGGAAGTGAGCTACCCAACATGTTGTATTGTCG
TGGTATCGAGTTGTTGCCAGTAACTCTGGAGGTTGGTGACTATATCTTGA
CTCCTGATATTTGTGTTGAGCGTAAAAGTGTCTCTGATTTGATTGGTTCA
TTGAACAATGGACGATTGTACACACAGTGTGTTTCAATGACGCGATTTTA
TCGGAAACCTGTTTTATTAATTGAATTCAACGAGTCGAAATCGTTTTCAT
TGCAAGCAAAAGGATCATTGAAAAACGAAATCAGTTTGCAAAATATCTCA
TCCAAATTAACCTTATTGACAATTCATTTCCCAAAACTCCGCATTATCTG
GTCACAAAGCCCACAGCTGACTGCTGAGATCTTCGAGGATTTGAAATCGA
ATGCTGATGAACCAAATGCAGAAGTTGCGATGGCTGTTGGAGTCGAGGGT
GCCGGTCAACAAAACCATTTCTACAATATCATTCAACAAGATCTGGTGGA
TCGCTTACCTGGCGTCAACATGAAGAACTGCCGTCACATTTTGAACAAAT
TCAATACCATGAAAGAATTAATGAACACTGATGAGAAAACTATCAGTGAT
GTTTTTGGTAATGCAAACAATGCCAAACTGTTGAGTAATTTCATTCATAA
AAAGCATGACGTCACTCAACCTAAAATGAAACGTAGgaaaaagtagtttt
tgttgttATTTTATTGGGAGCCATCTATTTTATGCCATATTTAGGGAAGT
TTTGATGCgttgctattttttccatcttttttttgagtttttgatatGCA
TTAGGAAGGAAATTTTGAACATATCAGTGaac
Run BLAST on NCBI

protein sequence of TCONS_00069779-protein

>TCONS_00069779-protein ID=TCONS_00069779-protein|Name=TCONS_00069779-protein|organism=Clytia hemisphaerica|type=polypeptide|length=836bp
MEVDSHQDDHQLLDWEAKLFLEIMEDDGLLVLAKGLGLDRMFLKVVQTFC
KQDNLVFVLNTIPEEQFHFLNELSALDVKHLPKVISDSSVEERRQLYLQG
GVFFVSSKILVMDMLTKRVPIDYITGILVTRAHKIAESSQESFILRMFRE
HNSDGFIKAFSDIPTAFMAGYCQVERVMKLLFIRHLFLRPRFHNEIAACL
ELHKPDVIEVNIEITPKMRAIQLSLLDLLNISLRELKRAVPNLDPDHFTL
ENSLNRTFDRMLKVQLDSVWNELANRTKELVSDIRVLRTLLSYLTQYDCV
TFYNFLDTLKKNEKNKKSMWMLTDAANTVYVNAKERVMGVPEKDKKGKVV
KKGKPEPCPKWEILTEILDEIEKEKVNQDEKKVLVCAVDDRTSYQLSQVL
CHGIDSFLQGQYERSALSTGYHSGSAEETDSDFSMNFSKFSDNEKAGDKG
KSDEEDNDSKFSLDLNTNPLIIHSLHGSADHYSLFQTLYEFEPTYVVLFD
ASVEFVRQLEVFKASRPGIPLRVYFLFYSSSIEEQRYLTSLRQEKDAFEL
LIRQKADMVIPEERQAKTQAAKSSLRDASKASATVVSSRKAGGRDVQNAK
TRNIVVDMREFGSELPNMLYCRGIELLPVTLEVGDYILTPDICVERKSVS
DLIGSLNNGRLYTQCVSMTRFYRKPVLLIEFNESKSFSLQAKGSLKNEIS
LQNISSKLTLLTIHFPKLRIIWSQSPQLTAEIFEDLKSNADEPNAEVAMA
VGVEGAGQQNHFYNIIQQDLVDRLPGVNMKNCRHILNKFNTMKELMNTDE
KTISDVFGNANNAKLLSNFIHKKHDVTQPKMKRRKK
Run BLAST on NCBI

transcript from alignment at scaffold_507:182652..185333

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069779 ID=TCONS_00069779|Name=TCONS_00069779|organism=Clytia hemisphaerica|type=transcript|length=2682bp|location=Sequence derived from alignment at scaffold_507:182652..185333 (Clytia hemisphaerica)
gttCACTGATATGTTCAAAATTTCCTTCCTAATGCatatcaaaaactcaa aaaaaagatggaaaaaatagcaacGCATCAAAACTTCCCTAAATATGGCA TAAAATAGATGGCTCCCAATAAAATaacaacaaaaactactttttcCTAC GTTTCATTTTAGGTTGAGTGACGTCATGCTTTTTATGAATGAAATTACTC AACAGTTTGGCATTGTTTGCATTACCAAAAACATCACTGATAGTTTTCTC ATCAGTGTTCATTAATTCTTTCATGGTATTGAATTTGTTCAAAATGTGAC GGCAGTTCTTCATGTTGACGCCAGGTAAGCGATCCACCAGATCTTGTTGA ATGATATTGTAGAAATGGTTTTGTTGACCGGCACCCTCGACTCCAACAGC CATCGCAACTTCTGCATTTGGTTCATCAGCATTCGATTTCAAATCCTCGA AGATCTCAGCAGTCAGCTGTGGGCTTTGTGACCAGATAATGCGGAGTTTT GGGAAATGAATTGTCAATAAGGTTAATTTGGATGAGATATTTTGCAAACT GATTTCGTTTTTCAATGATCCTTTTGCTTGCAATGAAAACGATTTCGACT CGTTGAATTCAATTAATAAAACAGGTTTCCGATAAAATCGCGTCATTGAA ACACACTGTGTGTACAATCGTCCATTGTTCAATGAACCAATCAAATCAGA GACACTTTTACGCTCAACACAAATATCAGGAGTCAAGATATAGTCACCAA CCTCCAGAGTTACTGGCAACAACTCGATACCACGACAATACAACATGTTG GGTAGCTCACTTCCGAATTCACGCATATCAACCACAATGTTGCGGGTTTT CGCATTTTGAACATCTCGTCCGCCTGCTTTACGAGAGCTTACAACGGTAG CAGAAGCTTTGGACGCATCTCGAAGACTACTCTTAGCTGCTTGTGTTTTG GCTTGTCGTTCCTCTGGAATAACCATGTCAGCTTTTTGACGAATTAAAAG CTCGAATGCATCTTTTTCTTGGCGCAAGGATGTCAAATAGCGTTGTTCTT CAATGGAACTACTGTAGAAGAGAAAATATACTCGAAGAGGTATTCCTGGT CGAGACGCTTTGAATACCTCAAGTTGACGAACAAATTCAACAGATGCATC AAACAAAACAACATAAGTTGGTTCAAATTCATAGAGTGTTTGGAACAAAC TGTAATGGTCTGCACTGCCATGTAACGAATGAATGATGAGAGGATTGGTA TTCAAATCAAGTGAAAATTTGCTATCGTTATCTTCCTCATCTGATTTGCC TTTGTCACCTGCTTTTTCATTGTCAGAAAATTTGCTAAAGTTCATTGAAA AGTCGCTATCAGTCTCTTCAGCAGAGCCACTATGATAGCCGGTTGAAAGC GCACTCCTTTCATATTGCCCTTGTAAGAAACTATCAATACCATGGCATAG AACTTGACTCAGCTGATAAGAAGTTCGGTCATCAACCGCACAAACCAATA CCTTTTTCTCATCCTGATTAACCTTTTCCTTCTCAATTTCATCCAAGATC TCTGTGAGGATTTCCCACTTTGGACAAGGCTCTGGTTTGCcctttttaac aacttttccTTTCTTATCTTTCTCAGGGACTCCCATCACTCGCTCTTTTG CATTGACATAAACAGTGTTAGCGGCATCAGTCAACATCCACATactcttt ttatttttctcatttttctttaaagtgTCAAGAAAGTTATAAAATGTCAC ACAATCATACTGAGTAAGGTAGGAGAGTAAAGTTCTAAGAACCCGAATGT CAGAAACGAGTTCTTTTGTTCTGTTTGCCAACTCATTCCAGACTGAATCT AATTGAACTTTTAACATGCGAtcaaaagttctatttaaggaGTTCTCCAA AGTGAAGTGATCAGGATCTAAGTTTGGTACAGCTCTCTTCAATTCACGCA AGGAGATGTTCAGCAAGTCTAACAAAGACAATTGAATAGCTCTCATTTTT GGTGTGATTTCAATGTTCACCTCAATAACATCAGGTTTATGTAATTCAAG GCAAGCAGCAATCTCATTGTGAAAACGTGGTCTTAAAAAGAGATGTCTTA TGAAAAGCAATTTCATCACACGTTCCACTTGACAATACCCAGCCATGAAA GCAGTTGGTATGTCACTGAAAGCTTTGATAAACCCATCACTGTTGTGCTC ACGAAACATCCGCAAAATGAAACTCTCCTGACTTGATTCTGCTATCTTGT GTGCACGTGTTACTAAAATACCAGTAATGTAATCAATTGGAACTCTCTTA GTAAGCATATCCATGACCAatatttttgatgaaacaaagaaaacacCTCC TTGGAGGTAAAGTTGTCGACGTTCTTCAACTGAACTATCTGAAATTACTT TAGGTAAATGTTTAACATCAAGTGCACTGAGTTCATTAAGGAAATGGAAC TGTTCTTCTGGAATGGTATTGAGTACAAAAACCAAATTGTCTTGTTTACA AAATGTTTGaacaactttcaaaaacatacGGTCAAGGCCAAGTCCTTTAG CTAACACAAGCAGTCCATCATCTTCCATGATTTCCAGGAAAAGTTTGGCT TCCCAATCCAATAATTGATGATCATCTTGGTGGCTGTCTACTTCCATTTA GatgttttaaaattctttgTTCATTAGCTGAA

Coding sequence (CDS) from alignment at scaffold_507:182652..185333

>TCONS_00069779 ID=TCONS_00069779|Name=TCONS_00069779|organism=Clytia hemisphaerica|type=CDS|length=2511bp|location=Sequence derived from alignment at scaffold_507:182652..185333 (Clytia hemisphaerica)
ctactttttcCTACGTTTCATTTTAGGTTGAGTGACGTCATGCTTTTTAT
GAATGAAATTACTCAACAGTTTGGCATTGTTTGCATTACCAAAAACATCA
CTGATAGTTTTCTCATCAGTGTTCATTAATTCTTTCATGGTATTGAATTT
GTTCAAAATGTGACGGCAGTTCTTCATGTTGACGCCAGGTAAGCGATCCA
CCAGATCTTGTTGAATGATATTGTAGAAATGGTTTTGTTGACCGGCACCC
TCGACTCCAACAGCCATCGCAACTTCTGCATTTGGTTCATCAGCATTCGA
TTTCAAATCCTCGAAGATCTCAGCAGTCAGCTGTGGGCTTTGTGACCAGA
TAATGCGGAGTTTTGGGAAATGAATTGTCAATAAGGTTAATTTGGATGAG
ATATTTTGCAAACTGATTTCGTTTTTCAATGATCCTTTTGCTTGCAATGA
AAACGATTTCGACTCGTTGAATTCAATTAATAAAACAGGTTTCCGATAAA
ATCGCGTCATTGAAACACACTGTGTGTACAATCGTCCATTGTTCAATGAA
CCAATCAAATCAGAGACACTTTTACGCTCAACACAAATATCAGGAGTCAA
GATATAGTCACCAACCTCCAGAGTTACTGGCAACAACTCGATACCACGAC
AATACAACATGTTGGGTAGCTCACTTCCGAATTCACGCATATCAACCACA
ATGTTGCGGGTTTTCGCATTTTGAACATCTCGTCCGCCTGCTTTACGAGA
GCTTACAACGGTAGCAGAAGCTTTGGACGCATCTCGAAGACTACTCTTAG
CTGCTTGTGTTTTGGCTTGTCGTTCCTCTGGAATAACCATGTCAGCTTTT
TGACGAATTAAAAGCTCGAATGCATCTTTTTCTTGGCGCAAGGATGTCAA
ATAGCGTTGTTCTTCAATGGAACTACTGTAGAAGAGAAAATATACTCGAA
GAGGTATTCCTGGTCGAGACGCTTTGAATACCTCAAGTTGACGAACAAAT
TCAACAGATGCATCAAACAAAACAACATAAGTTGGTTCAAATTCATAGAG
TGTTTGGAACAAACTGTAATGGTCTGCACTGCCATGTAACGAATGAATGA
TGAGAGGATTGGTATTCAAATCAAGTGAAAATTTGCTATCGTTATCTTCC
TCATCTGATTTGCCTTTGTCACCTGCTTTTTCATTGTCAGAAAATTTGCT
AAAGTTCATTGAAAAGTCGCTATCAGTCTCTTCAGCAGAGCCACTATGAT
AGCCGGTTGAAAGCGCACTCCTTTCATATTGCCCTTGTAAGAAACTATCA
ATACCATGGCATAGAACTTGACTCAGCTGATAAGAAGTTCGGTCATCAAC
CGCACAAACCAATACCTTTTTCTCATCCTGATTAACCTTTTCCTTCTCAA
TTTCATCCAAGATCTCTGTGAGGATTTCCCACTTTGGACAAGGCTCTGGT
TTGCcctttttaacaacttttccTTTCTTATCTTTCTCAGGGACTCCCAT
CACTCGCTCTTTTGCATTGACATAAACAGTGTTAGCGGCATCAGTCAACA
TCCACATactctttttatttttctcatttttctttaaagtgTCAAGAAAG
TTATAAAATGTCACACAATCATACTGAGTAAGGTAGGAGAGTAAAGTTCT
AAGAACCCGAATGTCAGAAACGAGTTCTTTTGTTCTGTTTGCCAACTCAT
TCCAGACTGAATCTAATTGAACTTTTAACATGCGAtcaaaagttctattt
aaggaGTTCTCCAAAGTGAAGTGATCAGGATCTAAGTTTGGTACAGCTCT
CTTCAATTCACGCAAGGAGATGTTCAGCAAGTCTAACAAAGACAATTGAA
TAGCTCTCATTTTTGGTGTGATTTCAATGTTCACCTCAATAACATCAGGT
TTATGTAATTCAAGGCAAGCAGCAATCTCATTGTGAAAACGTGGTCTTAA
AAAGAGATGTCTTATGAAAAGCAATTTCATCACACGTTCCACTTGACAAT
ACCCAGCCATGAAAGCAGTTGGTATGTCACTGAAAGCTTTGATAAACCCA
TCACTGTTGTGCTCACGAAACATCCGCAAAATGAAACTCTCCTGACTTGA
TTCTGCTATCTTGTGTGCACGTGTTACTAAAATACCAGTAATGTAATCAA
TTGGAACTCTCTTAGTAAGCATATCCATGACCAatatttttgatgaaaca
aagaaaacacCTCCTTGGAGGTAAAGTTGTCGACGTTCTTCAACTGAACT
ATCTGAAATTACTTTAGGTAAATGTTTAACATCAAGTGCACTGAGTTCAT
TAAGGAAATGGAACTGTTCTTCTGGAATGGTATTGAGTACAAAAACCAAA
TTGTCTTGTTTACAAAATGTTTGaacaactttcaaaaacatacGGTCAAG
GCCAAGTCCTTTAGCTAACACAAGCAGTCCATCATCTTCCATGATTTCCA
GGAAAAGTTTGGCTTCCCAATCCAATAATTGATGATCATCTTGGTGGCTG
TCTACTTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043452XLOC_043452Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069779-proteinTCONS_00069779-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069779-exon-scaffold_507-1491911889:182652..185333TCONS_00069779-exon-scaffold_507-1491911889:182652..185333Clytia hemisphaericaexon
TCONS_00069779-exon-scaffold_507-1510915933:182652..185333TCONS_00069779-exon-scaffold_507-1510915933:182652..185333Clytia hemisphaericaexon
TCONS_00069779-exon-scaffold_507-1575043694:182652..185333TCONS_00069779-exon-scaffold_507-1575043694:182652..185333Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_507supercontigscaffold_507:182652..185333 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.88651 1.448 2.71549 3.66344 3.74746 3.14813 2.48856 2.6535 2.53331 2.38223 2.54943 2.38827 2.20305 2.65616 1.88458 1.96142 2.96647 2.90685 1.1533e-07 2.4032 0.0300229 0.097393 0.310244 0 1.42755 1.31731
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR011335Restrct_endonuc-II-like
IPR010994RuvA_2-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
Blast
BLAST of TCONS_00069779 vs. Swiss-Prot (Human)
Match: XPF (DNA repair endonuclease XPF OS=Homo sapiens GN=ERCC4 PE=1 SV=3)

HSP 1 Score: 402.134 bits (1032), Expect = 1.663e-124
Identity = 201/378 (53.17%), Postives = 276/378 (73.02%), Query Frame = 3
Query: 1395 EEDNDSKFSLDLNTN--------PL-IIHSLHGSADHYSLFQTLYEFEPTYVVLFDASVEFVRQLEVFKASRPGIPLRVYFLFYSSSIEEQRYLTSLRQEKDAFELLIRQKADMVIPEERQAKTQAAKSSLRDASKASATVVSSRKAGGRDVQNAKTRNIVVDMREFGSELPNMLYCRGIELLPVTLEVGDYILTPDICVERKSVSDLIGSLNNGRLYTQCVSMTRFYRKPVLLIEFNESKSFSLQAKGSLKNEISLQNISSKLTLLTIHFPKLRIIWSQSPQLTAEIFEDLKSNADEPNXXXXXXXXX-XXXXQQNHFYNIIQQDLVDRLPGVNMKNCRHILNKFNTMKELMNTDEKTISDVFGNANNAKLLSNFIH 2498
            EE    +F ++L+++        PL IIH L G +D Y+L + L+E EP YVVL+DA + FVRQLE+++ASRPG PLRVYFL Y  S EEQRYLT+LR+EK+AFE LIR+KA MV+PEER+ + +     +R  + A  +   +RKAGG++ QN   ++IVVDMREF SELP++++ RGI++ PVTLEVGDYILTP++CVERKS+SDLIGSLNNGRLY+QC+SM+R+Y++PVLLIEF+ SK FSL ++G+L  EIS  +ISSKLTLLT+HFP+LRI+W  SP  TAE+FE+LK +  +P+A  A+A+        ++  YN   QD + ++PGVN KNCR +++    + EL    +  ++ + GNA NAK L +FIH
Sbjct:  527 EEIKHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGTASADVST-DTRKAGGQE-QNGTQQSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPEMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGALFQEISSNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQSKPQPDAATALAITADSETLPESEKYNPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDFIH 902          

HSP 2 Score: 345.51 bits (885), Expect = 1.622e-103
Identity = 189/425 (44.47%), Postives = 278/425 (65.41%), Query Frame = 3
Query:   69 LLDWEAKLFLEIMEDDGLLVLAKGLGLDRMFLKVVQTFCKQDNLVFVLNTIPEEQFHFLNELSALDVKHLPK-VISDSSVEERRQLYLQGGVFFVSSKILVMDMLTKRVPIDYITGILVTRAHKIAESSQESFILRMFREHNSDGFIKAFSDIPTAFMAGYCQVERVMKLLFIRHLFLRPRFHNEIAACLELHKPDVIEVNIEITPKMRAIQXXXXXXXXXXXXXXKRAVPNLDPDHFTLENSLNRTFDRMLKVQLDSVWNELANRTKELVSDIRVLRTLLSYLTQYDCVTFYNFLDTLKKNEK--NKKSMWMLTDAANTVYVNA--------------KERVMXXXXXXXXXXXXXXXXXXXXXXWEILTEILDEIEKEKVNQD----EKKVLVCAVDDRTSYQLSQVLCHGIDSFLQGQYERS 1280
            LL++E +L LE+++ DGL+V A+GLG DR+    +Q  C    LV VLNT P E+ +F+N+L    V+HLP+ V ++ +   R ++Y QGGV F +S+ILV+D LT R+P D ITGILV RAH+I ES QE+FILR+FR+ N  GFIKAF+D   AF  G+C VERVM+ LF+R L+L PRFH  + + LE HKP+V+E+++ +TP M AIQ ++LD+LN  L+ELK   P+L+ +  +LEN++ + FD+ ++  LD +W++L  +TK LV D+++LRTLL YL+QYDCVTF N L++L+  EK   + S W+  D++ ++++NA              KE++    E  +  +  K+   E  PKWE LTE+L EIE E    +      +VL+CA DDRT  QL   +  G ++FL   Y ++
Sbjct:   15 LLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEIKEGEETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKT 439          
The following BLAST results are available for this feature:
BLAST of TCONS_00069779 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XPF1.663e-12453.17DNA repair endonuclease XPF OS=Homo sapiens GN=ERC... [more]
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