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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069832 ID=TCONS_00069832|Name=TCONS_00069832|organism=Clytia hemisphaerica|type=transcript|length=1074bp
cgtttgttttttgtttttgtggtgGAACTCCATTGATCCTTATGTAAATA
AATTCATGgttttgaaaatgtaaaaataattgGTACTATAAGTTGATTTT
TCATGGAACCGATCCTTGTTCCGTCGTAGGATGCAACGAGCCGAAAAGGT
ATCTTTCATTCTGAAGCTtgaaaagcattttgtttgtttacattggtTGG
TTGGTTTGTTGTTATGGTAACTTGATTAATGcagaaaaatttcatcaaag
tCTCCAGAAGACAAGTTTGATTGTGTTTTAAAGTTGGTTAACAGTGTTTT
TTAGTAAcataataatttttcagttcaaAAATAAGTTTCTGAAGGAAAAT
CAAATGGGCGTGTGTATGGCTAAACCTACTTATTATGGGTGGTAATAGGA
TAGGAGCGATTTTTATTTGAGTTTATTCTTTCATCACGTGAATCTTTTCA
GAGAACCATCTTcatatttgaaattttagccGAGTAATAATATCTCTCTT
TATCACCTTATCCATAAAGACTTCTTTTTTAGTACATAACTTGTGAGCTT
TTTGATACAGTATTTCTTTAGATAACGCCTCATTCTCACTGTAAAATTTA
GAGCCGTTTTCGGGTTCCAACATCAAAATTGTTTATAGTGAGGAAAGGgc
ctttttcagaatttattattttttcatagttttaGTTATATATTATTAGC
TAGATTTAGCTCTAAAAGAGTTTCATATATTATTAAGTTCCTAATTTATA
TTGTAGATTTTCAtcccaaaaatatttcttttaaccCCTTTGTGttagat
tttttttagaatattaTGAACATAGTTCTATATATTAtattaataaatat
ttttgcttttcttcGAAGATATGACTTTTAAGTACATAGGACAGTACATA
GTTGTGTGGTGAGTCGAATAAATGTAATAAAATTGGGGCTAGCTGGGAAT
ACAAGATAGACATTTTGTTGGCATCTTAGAAAGAATGTCTGTAGAATGTT
CAAAAATTTCAtggttttttcttgttttggcTGAAGCAaactatttttaa
aatcaaaattgggGTACATTTGGG Run BLAST on NCBI transcript from alignment at scaffold_509:85457..86530 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069832 ID=TCONS_00069832|Name=TCONS_00069832|organism=Clytia hemisphaerica|type=transcript|length=1074bp|location=Sequence derived from alignment at scaffold_509:85457..86530 (Clytia hemisphaerica)
CCCAAATGTACcccaattttgattttaaaaatagttTGCTTCAgccaaaa
caagaaaaaaccaTGAAATTTTTGAACATTCTACAGACATTCTTTCTAAG
ATGCCAACAAAATGTCTATCTTGTATTCCCAGCTAGCCCCAATTTTATTA
CATTTATTCGACTCACCACACAACTATGTACTGTCCTATGTACTTAAAAG
TCATATCTTCgaagaaaagcaaaaatatttattaataTAATATATAGAAC
TATGTTCAtaatattctaaaaaaaatctaaCACAAAGGggttaaaagaaa
tatttttgggaTGAAAATCTACAATATAAATTAGGAACTTAATAATATAT
GAAACTCTTTTAGAGCTAAATCTAGCTAATAATATATAACtaaaactatg
aaaaaataataaattctgaaaaaggcCCTTTCCTCACTATAAACAATTTT
GATGTTGGAACCCGAAAACGGCTCTAAATTTTACAGTGAGAATGAGGCGT
TATCTAAAGAAATACTGTATCAAAAAGCTCACAAGTTATGTACTAAAAAA
GAAGTCTTTATGGATAAGGTGATAAAGAGAGATATTATTACTCggctaaa
atttcaaatatgAAGATGGTTCTCTGAAAAGATTCACGTGATGAAAGAAT
AAACTCAAATAAAAATCGCTCCTATCCTATTACCACCCATAATAAGTAGG
TTTAGCCATACACACGCCCATTTGATTTTCCTTCAGAAACTTATTTttga
actgaaaaattattatgTTACTAAAAAACACTGTTAACCAACTTTAAAAC
ACAATCAAACTTGTCTTCTGGAGactttgatgaaatttttctgCATTAAT
CAAGTTACCATAACAACAAACCAACCAaccaatgtaaacaaacaaaatgc
ttttcaAGCTTCAGAATGAAAGATACCTTTTCGGCTCGTTGCATCCTACG
ACGGAACAAGGATCGGTTCCATGAAAAATCAACTTATAGTACcaattatt
tttacattttcaaaacCATGAATTTATTTACATAAGGATCAATGGAGTTC
caccacaaaaacaaaaaacaaacg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069832-exon-scaffold_509-1491911889:85457..86530 | TCONS_00069832-exon-scaffold_509-1491911889:85457..86530 | Clytia hemisphaerica | exon |
| TCONS_00069832-exon-scaffold_509-1510915933:85457..86530 | TCONS_00069832-exon-scaffold_509-1510915933:85457..86530 | Clytia hemisphaerica | exon |
| TCONS_00069832-exon-scaffold_509-1575043694:85457..86530 | TCONS_00069832-exon-scaffold_509-1575043694:85457..86530 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_509 | supercontig | scaffold_509:85457..86530 . |
Blast
The following BLAST results are available for this feature:
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