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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070097 ID=TCONS_00070097|Name=TCONS_00070097|organism=Clytia hemisphaerica|type=transcript|length=2632bp
gatttgacatgtattttttatattgtAGCGATTATACGATTCACGACGTC
Acaaaattcgatcaaattatgacgtcatgattacactttctttaataatt
aatttttaggttaatatttaattacgtaacaaccgggccctgaaacctta
aggtatagaggtactttagagccctaagtgaatctctgaatctggctgct
attggtagcgaaaacttagggtaaactgttaggtttttgagacttgccct
aagtcactcgagACTGCTTAATCTTTTCCTTACAAATACTAAGATCGACT
ATATCTCTATACTCATCCGGAATTAATTCCCAAACTTttggccctaaaaa
tgaaagtgactctAAACCGTGAAAAACAGAGTTTATTTCTCTTGATCTTC
TGAAGTAAGGCGTTTTGCgatttactttgatattttcatcatgtttgaaa
atttctttagttagatctgatatgttatttttacatttgaaaagttctat
tgCTAACTGAAGATTTTTTTTGGTGGAATTTGATGGCACCGTCTTTCTCT
AAAAGCTGCTCAAAAGTAGATGTATGATCAGAATACACTATCCTCAGaca
tctttcgtggaggtgatttatttttttatctagCCTGCGAACATGAAACA
TCCAGACAAGCGAACAATAATTGACTTGACTTCGAAAGAAGGCATTCATG
AgcctttgctttttcttttgattcatGTACGGTGCTACTCTCGCAAGTGC
ACTGATTTTCTGGCTAGCTTTCTTATAAATCGTGTTAATATGTGCCTCAA
AAGTCAGACAGTTGTCAAAAGTTAATCCTAGGATCTTGCCTTAGTTGCTG
TTAGAGATGCGTTCATTCTGTATAGTAATGAAGATTTCTTTGCTAGTATT
GTTAGCTATCAACTCAGACTTGTCTGcattttctttcatttgattttggg
tTATCCATTCAAAGATGATAGCAGCTCCATTCGAGAGCTCCTCACCAACC
TGTTCCCAAGAGTATGGCTAAAAGTGGAGTTTGTGTACTCTTACCTTTTC
TATATCCAAATTGTCTATTGCTCAAAATGTTGTTAAAGTAGGTTGTGATT
TTCCCGACTTCCTCTTTCGTTGTTGGTATAAAGGaaaatttatttagata
ttcagttttcttgatttcagtGACACTTGGGTGCGGTATGGTAACATCAA
TGGCACCAGGGCTACAAGTAAATGCGCTAGCTTACGTAGATGACATTGCT
GGTGCAGATTCTAAACTGGCAGCAGAGAACACTTTGAAAGCACTCAAGGA
GATGGATGAGACAAAAAATTCCCCTTCTCGACCTCAAAGACGAAAATACT
CCACatagagaagaaaaagaagaataaaaagaTGGCTatttttgtcaagg
caggaTCCTGCTGATTTGTTAAGGTGGAAGGcatcttttgcttgtaaaat
gacgttgctgctgttcacacttattggaaattttaaacgagtatcattct
tgaggtttttttaccacttcctctgggagaggtGAGAGCTGTCCTATCCT
CCACTTGTTGATGGTGGTGGCTGTCGTCAACTGCTGAAATCTTCCATAAA
TGGTGTAATGGTTGTTTACTTTGTGGCATTCAATCTTCATGTCACATTTT
TGTGAtaattgattggagtaaccattACTATTACATCAATTACAATTACA
ATCTCatggaaaactatttttatggcttgatcaaaccaaatatctgcaaC
AGCCCCAAGTCAGATTTATAAAACAACATTCGGATTTCGAAATACTTTAA
CTTTTTAGACCCTATGATTTTATTGGAATTATGTCATGGTTAAACTTAAC
ATTCAGCGGGTATTGTTgccaaacaatgattttttttgtcacGTTGTCAG
CCAATACTGTTCGACTATTTGAGTATCACTTTTACGAAATAGATCATACG
CCATCGAATATTGGGCGATTGTGGTCCTGTGTGGTCAGTAATATTCGTTG
AGGCTGATTGAGGAGGTACGCTGCTGTGAagaacagacaaaatattttgt
tgtggtttgagatcaagcaaacgCCTATTATGTACGTATTAATGCAACAC
AAGAAGTGGGTCAAATTGTGATCATGTTTTGTTCAATGATATTTATAACT
TTTACATACTAAGGCAGCAATCACTAATACACTCTccattttatttgaat
ctttttcagtcagtagtagaaaatttcaaattgactGGTCATTCACTGGT
GCAGGTGGTCATCAGTTCAAACACTTTAAATAATTCCCAAataaaataag
cacttttgaagcattttcctTAAAACTCTTGAGTGTGTTTTTGGCGAAGT
GAAATGAAGATGTTTCTGATCGCCGCCTTAGAATATACtataagtggata
aattttggcgtggatttaatttggcaattggccaaaatacaattttaaac
aGGGATTTAGCTGACTTGACGATAgatcaatttcataaaatttggcgggg
atttgaTTTGGCGAAATGCAAATTTTGAGACACTTAAATTGgtgaaaaat
tactttaaaatatactgaaaagttgttattttttacataatattattttt
gttaaatttggcgggaatttagtTTGGTGAAT Run BLAST on NCBI transcript from alignment at scaffold_513:251794..254425- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070097 ID=TCONS_00070097|Name=TCONS_00070097|organism=Clytia hemisphaerica|type=transcript|length=2632bp|location=Sequence derived from alignment at scaffold_513:251794..254425- (Clytia hemisphaerica)
GATTTGACATGTATTTTTTATATTGTAGCGATTATACGATTCACGACGTC
ACAAAATTCGATCAAATTATGACGTCATGATTACACTTTCTTTAATAATT
AATTTTTAGGTTAATATTTAATTACGTAACAACCGGGCCCTGAAACCTTA
AGGTATAGAGGTACTTTAGAGCCCTAAGTGAATCTCTGAATCTGGCTGCT
ATTGGTAGCGAAAACTTAGGGTAAACTGTTAGGTTTTTGAGACTTGCCCT
AAGTCACTCGAGACTGCTTAATCTTTTCCTTACAAATACTAAGATCGACT
ATATCTCTATACTCATCCGGAATTAATTCCCAAACTTTTGGCCCTAAAAA
TGAAAGTGACTCTAAACCGTGAAAAACAGAGTTTATTTCTCTTGATCTTC
TGAAGTAAGGCGTTTTGCGATTTACTTTGATATTTTCATCATGTTTGAAA
ATTTCTTTAGTTAGATCTGATATGTTATTTTTACATTTGAAAAGTTCTAT
TGCTAACTGAAGATTTTTTTTGGTGGAATTTGATGGCACCGTCTTTCTCT
AAAAGCTGCTCAAAAGTAGATGTATGATCAGAATACACTATCCTCAGACA
TCTTTCGTGGAGGTGATTTATTTTTTTATCTAGCCTGCGAACATGAAACA
TCCAGACAAGCGAACAATAATTGACTTGACTTCGAAAGAAGGCATTCATG
AGCCTTTGCTTTTTCTTTTGATTCATGTACGGTGCTACTCTCGCAAGTGC
ACTGATTTTCTGGCTAGCTTTCTTATAAATCGTGTTAATATGTGCCTCAA
AAGTCAGACAGTTGTCAAAAGTTAATCCTAGGATCTTGCCTTAGTTGCTG
TTAGAGATGCGTTCATTCTGTATAGTAATGAAGATTTCTTTGCTAGTATT
GTTAGCTATCAACTCAGACTTGTCTGCATTTTCTTTCATTTGATTTTGGG
TTATCCATTCAAAGATGATAGCAGCTCCATTCGAGAGCTCCTCACCAACC
TGTTCCCAAGAGTATGGCTAAAAGTGGAGTTTGTGTACTCTTACCTTTTC
TATATCCAAATTGTCTATTGCTCAAAATGTTGTTAAAGTAGGTTGTGATT
TTCCCGACTTCCTCTTTCGTTGTTGGTATAAAGGAAAATTTATTTAGATA
TTCAGTTTTCTTGATTTCAGTGACACTTGGGTGCGGTATGGTAACATCAA
TGGCACCAGGGCTACAAGTAAATGCGCTAGCTTACGTAGATGACATTGCT
GGTGCAGATTCTAAACTGGCAGCAGAGAACACTTTGAAAGCACTCAAGGA
GATGGATGAGACAAAAAATTCCCCTTCTCGACCTCAAAGACGAAAATACT
CCACATAGAGAAGAAAAAGAAGAATAAAAAGATGGCTATTTTTGTCAAGG
CAGGATCCTGCTGATTTGTTAAGGTGGAAGGCATCTTTTGCTTGTAAAAT
GACGTTGCTGCTGTTCACACTTATTGGAAATTTTAAACGAGTATCATTCT
TGAGGTTTTTTTACCACTTCCTCTGGGAGAGGTGAGAGCTGTCCTATCCT
CCACTTGTTGATGGTGGTGGCTGTCGTCAACTGCTGAAATCTTCCATAAA
TGGTGTAATGGTTGTTTACTTTGTGGCATTCAATCTTCATGTCACATTTT
TGTGATAATTGATTGGAGTAACCATTACTATTACATCAATTACAATTACA
ATCTCATGGAAAACTATTTTTATGGCTTGATCAAACCAAATATCTGCAAC
AGCCCCAAGTCAGATTTATAAAACAACATTCGGATTTCGAAATACTTTAA
CTTTTTAGACCCTATGATTTTATTGGAATTATGTCATGGTTAAACTTAAC
ATTCAGCGGGTATTGTTGCCAAACAATGATTTTTTTTGTCACGTTGTCAG
CCAATACTGTTCGACTATTTGAGTATCACTTTTACGAAATAGATCATACG
CCATCGAATATTGGGCGATTGTGGTCCTGTGTGGTCAGTAATATTCGTTG
AGGCTGATTGAGGAGGTACGCTGCTGTGAAGAACAGACAAAATATTTTGT
TGTGGTTTGAGATCAAGCAAACGCCTATTATGTACGTATTAATGCAACAC
AAGAAGTGGGTCAAATTGTGATCATGTTTTGTTCAATGATATTTATAACT
TTTACATACTAAGGCAGCAATCACTAATACACTCTCCATTTTATTTGAAT
CTTTTTCAGTCAGTAGTAGAAAATTTCAAATTGACTGGTCATTCACTGGT
GCAGGTGGTCATCAGTTCAAACACTTTAAATAATTCCCAAATAAAATAAG
CACTTTTGAAGCATTTTCCTTAAAACTCTTGAGTGTGTTTTTGGCGAAGT
GAAATGAAGATGTTTCTGATCGCCGCCTTAGAATATACTATAAGTGGATA
AATTTTGGCGTGGATTTAATTTGGCAATTGGCCAAAATACAATTTTAAAC
AGGGATTTAGCTGACTTGACGATAGATCAATTTCATAAAATTTGGCGGGG
ATTTGATTTGGCGAAATGCAAATTTTGAGACACTTAAATTGGTGAAAAAT
TACTTTAAAATATACTGAAAAGTTGTTATTTTTTACATAATATTATTTTT
GTTAAATTTGGCGGGAATTTAGTTTGGTGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070097-exon-scaffold_513-1575043694:251794..254425 | TCONS_00070097-exon-scaffold_513-1575043694:251794..254425 | Clytia hemisphaerica | exon |
| TCONS_00070097-exon-scaffold_513-1510915933:251794..254425 | TCONS_00070097-exon-scaffold_513-1510915933:251794..254425 | Clytia hemisphaerica | exon |
| TCONS_00070097-exon-scaffold_513-1491911889:251794..254425 | TCONS_00070097-exon-scaffold_513-1491911889:251794..254425 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:251794..254425 - |
Blast
The following BLAST results are available for this feature:
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