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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070150 ID=TCONS_00070150|Name=TCONS_00070150|organism=Clytia hemisphaerica|type=transcript|length=1120bp
CCCGGAAAGAAGAAGACTGTCTTTGATTGCTGGAATGGCTACCACAGCAT
CCCACTTGAACCAGACGATCGTCATCTGACCACCTTCATCACATACAGAT
ACAAGGTTGCACCCCAAGGCTACATCGCTTCTGGTGACGGATATACCAGA
AGACTGGATGAAATAGTCTCGAATGTCCCAGACAAGACCAAATGCATCGA
TGACTCACTACTCTGGGCAAATGACATTGAAGCTAGTTTCTTTCAAGCTG
TTGACTACTTAGAGTTATTGGGGAGAAATGGTGTCACACTCAATCCTGAG
AAAGTCCAATTCGCCCAGGATCGTGTCACGTTTGCTGGCTTTGAAATAAC
TCTGGACAACGTCAAACCGTGTAGAAGATTCTTCGAAGCAATTGAGGACT
TCCCGACCCCTCGCAACATCCACGATATCCGATCATGGTTTGGCTTGATC
AATCAAGTGTCTTATGCCTTCCCATCTGCTGAAATACTCCAACCATTCAG
ACACCTCCTTCGTCCAAACACACCTTTCATATGGAACAAGCAATTGGACG
AGACGTTCAAACTATCCAAACAGCTCATCGTCAACCAAATTGCAGAGGGT
ATCACCATTTTTGACAAGGACAAGTCAACATGTTTAGCTACTGATTGGTC
AAAGAAAGGCGTCGGTTACTGGCTCCTGCAGAAGCAATGCCAATGCGAAG
GCTCAAAACCTGGTTGCTGTCATGATGGATGGAAGATCACACTGACTGGC
AGTAGATTCACAAACAAATCTGAATCCAATTACTACCCCATAGTCGACGA
AGCATTAGCGGTTGCTGACGCACTGGAAAAGACAAGATACTTCACCCTTG
GCTGCTCAAATCTGATTGTGAACACCGACCATAAACCCCTTCTCAAAATC
TTCAGCGACAGATCTCTGAATGACATCCCAAACACTCGTCTGAGGGACTC
AAAGAAAAGACCCTTCCATTCAAATTCACTATCATTCACATCCCTGGCCT
GAAGAACATCATCCCAAACGCATTCTCTAGATACCCAGTTAGTGAAGCAC
CTAAAGACACTGGGGATGACGATTTTGACAAAATCTTGTCCATTGTATCC
GCCTTTCAAGCAATTACATG Run BLAST on NCBI protein sequence of TCONS_00070150-protein >TCONS_00070150-protein ID=TCONS_00070150-protein|Name=TCONS_00070150-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
PGKKKTVFDCWNGYHSIPLEPDDRHLTTFITYRYKVAPQGYIASGDGYTR
RLDEIVSNVPDKTKCIDDSLLWANDIEASFFQAVDYLELLGRNGVTLNPE
KVQFAQDRVTFAGFEITLDNVKPCRRFFEAIEDFPTPRNIHDIRSWFGLI
NQVSYAFPSAEILQPFRHLLRPNTPFIWNKQLDETFKLSKQLIVNQIAEG
ITIFDKDKSTCLATDWSKKGVGYWLLQKQCQCEGSKPGCCHDGWKITLTG
SRFTNKSESNYYPIVDEALAVADALEKTRYFTLGCSNLIVNTDHKPLLKI
FSDRSLNDIPNTRLRDSKKRPFHSNSLSFTSLA Run BLAST on NCBI transcript from alignment at scaffold_513:389409..390528 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070150 ID=TCONS_00070150|Name=TCONS_00070150|organism=Clytia hemisphaerica|type=transcript|length=1120bp|location=Sequence derived from alignment at scaffold_513:389409..390528 (Clytia hemisphaerica)
CATGTAATTGCTTGAAAGGCGGATACAATGGACAAGATTTTGTCAAAATC
GTCATCCCCAGTGTCTTTAGGTGCTTCACTAACTGGGTATCTAGAGAATG
CGTTTGGGATGATGTTCTTCAGGCCAGGGATGTGAATGATAGTGAATTTG
AATGGAAGGGTCTTTTCTTTGAGTCCCTCAGACGAGTGTTTGGGATGTCA
TTCAGAGATCTGTCGCTGAAGATTTTGAGAAGGGGTTTATGGTCGGTGTT
CACAATCAGATTTGAGCAGCCAAGGGTGAAGTATCTTGTCTTTTCCAGTG
CGTCAGCAACCGCTAATGCTTCGTCGACTATGGGGTAGTAATTGGATTCA
GATTTGTTTGTGAATCTACTGCCAGTCAGTGTGATCTTCCATCCATCATG
ACAGCAACCAGGTTTTGAGCCTTCGCATTGGCATTGCTTCTGCAGGAGCC
AGTAACCGACGCCTTTCTTTGACCAATCAGTAGCTAAACATGTTGACTTG
TCCTTGTCAAAAATGGTGATACCCTCTGCAATTTGGTTGACGATGAGCTG
TTTGGATAGTTTGAACGTCTCGTCCAATTGCTTGTTCCATATGAAAGGTG
TGTTTGGACGAAGGAGGTGTCTGAATGGTTGGAGTATTTCAGCAGATGGG
AAGGCATAAGACACTTGATTGATCAAGCCAAACCATGATCGGATATCGTG
GATGTTGCGAGGGGTCGGGAAGTCCTCAATTGCTTCGAAGAATCTTCTAC
ACGGTTTGACGTTGTCCAGAGTTATTTCAAAGCCAGCAAACGTGACACGA
TCCTGGGCGAATTGGACTTTCTCAGGATTGAGTGTGACACCATTTCTCCC
CAATAACTCTAAGTAGTCAACAGCTTGAAAGAAACTAGCTTCAATGTCAT
TTGCCCAGAGTAGTGAGTCATCGATGCATTTGGTCTTGTCTGGGACATTC
GAGACTATTTCATCCAGTCTTCTGGTATATCCGTCACCAGAAGCGATGTA
GCCTTGGGGTGCAACCTTGTATCTGTATGTGATGAAGGTGGTCAGATGAC
GATCGTCTGGTTCAAGTGGGATGCTGTGGTAGCCATTCCAGCAATCAAAG
ACAGTCTTCTTCTTTCCGGG Coding sequence (CDS) from alignment at scaffold_513:389409..390528 >TCONS_00070150 ID=TCONS_00070150|Name=TCONS_00070150|organism=Clytia hemisphaerica|type=CDS|length=1002bp|location=Sequence derived from alignment at scaffold_513:389409..390528 (Clytia hemisphaerica)
TCAGGCCAGGGATGTGAATGATAGTGAATTTGAATGGAAGGGTCTTTTCT
TTGAGTCCCTCAGACGAGTGTTTGGGATGTCATTCAGAGATCTGTCGCTG
AAGATTTTGAGAAGGGGTTTATGGTCGGTGTTCACAATCAGATTTGAGCA
GCCAAGGGTGAAGTATCTTGTCTTTTCCAGTGCGTCAGCAACCGCTAATG
CTTCGTCGACTATGGGGTAGTAATTGGATTCAGATTTGTTTGTGAATCTA
CTGCCAGTCAGTGTGATCTTCCATCCATCATGACAGCAACCAGGTTTTGA
GCCTTCGCATTGGCATTGCTTCTGCAGGAGCCAGTAACCGACGCCTTTCT
TTGACCAATCAGTAGCTAAACATGTTGACTTGTCCTTGTCAAAAATGGTG
ATACCCTCTGCAATTTGGTTGACGATGAGCTGTTTGGATAGTTTGAACGT
CTCGTCCAATTGCTTGTTCCATATGAAAGGTGTGTTTGGACGAAGGAGGT
GTCTGAATGGTTGGAGTATTTCAGCAGATGGGAAGGCATAAGACACTTGA
TTGATCAAGCCAAACCATGATCGGATATCGTGGATGTTGCGAGGGGTCGG
GAAGTCCTCAATTGCTTCGAAGAATCTTCTACACGGTTTGACGTTGTCCA
GAGTTATTTCAAAGCCAGCAAACGTGACACGATCCTGGGCGAATTGGACT
TTCTCAGGATTGAGTGTGACACCATTTCTCCCCAATAACTCTAAGTAGTC
AACAGCTTGAAAGAAACTAGCTTCAATGTCATTTGCCCAGAGTAGTGAGT
CATCGATGCATTTGGTCTTGTCTGGGACATTCGAGACTATTTCATCCAGT
CTTCTGGTATATCCGTCACCAGAAGCGATGTAGCCTTGGGGTGCAACCTT
GTATCTGTATGTGATGAAGGTGGTCAGATGACGATCGTCTGGTTCAAGTG
GGATGCTGTGGTAGCCATTCCAGCAATCAAAGACAGTCTTCTTCTTTCCG
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070150-exon-scaffold_513-1491911889:389409..390528 | TCONS_00070150-exon-scaffold_513-1491911889:389409..390528 | Clytia hemisphaerica | exon |
| TCONS_00070150-exon-scaffold_513-1510915933:389409..390528 | TCONS_00070150-exon-scaffold_513-1510915933:389409..390528 | Clytia hemisphaerica | exon |
| TCONS_00070150-exon-scaffold_513-1575043694:389409..390528 | TCONS_00070150-exon-scaffold_513-1575043694:389409..390528 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:389409..390528 . |
Blast
The following BLAST results are available for this feature:
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