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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070156 ID=TCONS_00070156|Name=TCONS_00070156|organism=Clytia hemisphaerica|type=transcript|length=1549bp
TTTCGatacaaaatttcatttaacTAATATTGAAAGTctaggaaaaaaat
taaaattgataaaaattagaatttgaaaatttcgtacAGTTCAAGTGGAA
AAGAAGAGGGGGAAGTCCTTGAAATTCAATACAATTTTGAGACTCTTTAA
ATTTTGGATTAATTTGTATTTTGTAAAAAGACAAAAGCTTGTTACTTGGA
TAAATAAAGTCTTTTCTCTTCAATGTTTAAAGAAGTAAAGTTAGTtaaaa
aaataagagaaaaatagaCGAAGAAGGCTTGCGGCACTGGCTGATATTTT
CAAACATTGACTGAATCAACACTTGTAAAAAACAGTAGTATCAATTATAT
GTGACATCTTTGAAAGTCAatgattctttttgttttggtaAATACTAGCG
AATAGAAAAGTTGACACTTCAAGTAACAATTAAAAGAGAACCACCACATT
CTAAATTCTTGTGATTGCTGTGAAGGAGTGAAGAAGTTAAATCTCGAGGA
CCTTTATATAACAACTTAGATTAACAAGACATAAAACACATTGACCTACA
AATAAAGGCTGATATCACTTCCAACAATGGCAAGACTACGTTTCTCATCA
TCATTTATCCTATTCATCACAATCACATCATCCATTCTTACCACAGTTCA
ACCATCAGACAATGTGGAAGCTGTGATAGCAGAAAGTGAAGAATGTTATG
TCTTCAAAACTTGTCATATTGGTGAAGTACCAGACATATGCCGAGAATGT
GATGCCAGTTGCCAACAAATGATTCCATATGCAAAATATGGGAACTGTAT
GCCTCAACATACTTCCATTGATATATTTGCCAACAAAAAAGTGTGAATTC
GCTTTATTTGGGCATTCTTTCTAGCATGTGAAAACCACCCTCAAACAGAC
ATTTGATATTAGATTATTCGCTTTGAGTGGGCATTCTTTCCTTTTACCAT
ATAGAAACCGCTCTCAAGAAAATTAGTCTAATTATACTGtcatggtttct
aaatggtagAAAGAATGGATGCGCACTGAAATCGATGGACCTCACTCTCC
AATATTAtagaaaaattatgaattattttaaaatatttattttatccaAT
CTCggtaaaaaaaatgtattaattGTCGTAACtttgatttaattttaaat
CTGTTTGTAAAGGGATTGTTAGATAATTtggatttttggacctacctccg
gtaccccggtggaggtcctttaaattaacccatgtccgttcgtccgttta
tctggtaccagatgtggaaatatgctacgacacgctttgctctgaaggtc
gggcatattttaacatctggaagcTTTGCATTACGGAATTTGACTTGACC
GCGTTTAAACATTTTGTGAGGAGCTTGGAAACGATCAACAGCAAGCTATC
ATCTAATTCCAAATCGGATGCGGGTGCTAGGctagaaaatataacaaatc
tgattcgcatcagatttgttatattttctggGCTAGCACCATATTCGTAT
TTGGTTCGGAATCATGTGCTGCTAGCTTGATTATGTAAACAAACATAAA Run BLAST on NCBI transcript from alignment at scaffold_513:509826..511374 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070156 ID=TCONS_00070156|Name=TCONS_00070156|organism=Clytia hemisphaerica|type=transcript|length=1549bp|location=Sequence derived from alignment at scaffold_513:509826..511374 (Clytia hemisphaerica)
TTTATGTTTGTTTACATAATCAAGCTAGCAGCACATGATTCCGAACCAAA
TACGAATATGGTGCTAGCccagaaaatataacaaatctgatgcgaatcag
atttgttatattttctagCCTAGCACCCGCATCCGATTTGGAATTAGATG
ATAGCTTGCTGTTGATCGTTTCCAAGCTCCTCACAAAATGTTTAAACGCG
GTCAAGTCAAATTCCGTAATGCAAAgcttccagatgttaaaatatgcccg
accttcagagcaaagcgtgtcgtagcatatttccacatctggtaccagat
aaacggacgaacggacatgggttaatttaaaggacctccaccggggtacc
ggaggtaggtccaaaaatccaAATTATCTAACAATCCCTTTACAAACAGa
tttaaaattaaatcaaaGTTACGACaattaatacattttttttaccGAGA
TtggataaaataaatattttaaaataattcataatttttctaTAATATTG
GAGAGTGAGGTCCATCGATTTCAGTGCGCATCCATTCTTTctaccattta
gaaaccatgaCAGTATAATTAGACTAATTTTCTTGAGAGCGGTTTCTATA
TGGTAAAAGGAAAGAATGCCCACTCAAAGCGAATAATCTAATATCAAATG
TCTGTTTGAGGGTGGTTTTCACATGCTAGAAAGAATGCCCAAATAAAGCG
AATTCACACTTTTTTGTTGGCAAATATATCAATGGAAGTATGTTGAGGCA
TACAGTTCCCATATTTTGCATATGGAATCATTTGTTGGCAACTGGCATCA
CATTCTCGGCATATGTCTGGTACTTCACCAATATGACAAGTTTTGAAGAC
ATAACATTCTTCACTTTCTGCTATCACAGCTTCCACATTGTCTGATGGTT
GAACTGTGGTAAGAATGGATGATGTGATTGTGATGAATAGGATAAATGAT
GATGAGAAACGTAGTCTTGCCATTGTTGGAAGTGATATCAGCCTTTATTT
GTAGGTCAATGTGTTTTATGTCTTGTTAATCTAAGTTGTTATATAAAGGT
CCTCGAGATTTAACTTCTTCACTCCTTCACAGCAATCACAAGAATTTAGA
ATGTGGTGGTTCTCTTTTAATTGTTACTTGAAGTGTCAACTTTTCTATTC
GCTAGTATTtaccaaaacaaaaagaatcatTGACTTTCAAAGATGTCACA
TATAATTGATACTACTGTTTTTTACAAGTGTTGATTCAGTCAATGTTTGA
AAATATCAGCCAGTGCCGCAAGCCTTCTTCGtctatttttctcttatttt
tttaACTAACTTTACTTCTTTAAACATTGAAGAGAAAAGACTTTATTTAT
CCAAGTAACAAGCTTTTGTCTTTTTACAAAATACAAATTAATCCAAAATT
TAAAGAGTCTCAAAATTGTATTGAATTTCAAGGACTTCCCCCTCTTCTTT
TCCACTTGAACTgtacgaaattttcaaattctaatttttatcaattttaa
tttttttcctagACTTTCAATATTAgttaaatgaaattttgtatCGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070156-exon-scaffold_513-1491911889:509826..511374 | TCONS_00070156-exon-scaffold_513-1491911889:509826..511374 | Clytia hemisphaerica | exon |
| TCONS_00070156-exon-scaffold_513-1510915933:509826..511374 | TCONS_00070156-exon-scaffold_513-1510915933:509826..511374 | Clytia hemisphaerica | exon |
| TCONS_00070156-exon-scaffold_513-1575043694:509826..511374 | TCONS_00070156-exon-scaffold_513-1575043694:509826..511374 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:509826..511374 . |
Blast
The following BLAST results are available for this feature:
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