TCONS_00070201 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070201
Unique NameTCONS_00070201
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1776

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070201 ID=TCONS_00070201|Name=TCONS_00070201|organism=Clytia hemisphaerica|type=transcript|length=1776bp
AAATAAGATAACTGTCTGTTGAGtgacaaaaatattgacttaTAGCATCA
TTACAACTTGCtatataatttaaaaataatgatgaagatcaattattttg
aaatatcacGAATCCCTACAGTTGAcgcaaaaaaagttttagcAACCATT
GAAGATGATGAACGAAATCCTAACCGTAAAAGAAGGAGACTTGACAACCT
GAATGTAGAAGAAAGAATACTCAGGAGGAAATTGAAAAACAGAGTTGCTG
CCCAAAGTGCACGAGACCGAAAGAAAGCACACATGGACCAACTTGAAATT
ACACTTATGCGAGTTGAAAAAGagaacaaatttttgaagaaaagcaATGA
GGAATTAAGATCACAAGTTCATCAATTAATGGAAAATAATGCACAGCTCA
GATCAAAGCTTGGCTTAACCCCACCTGCTTCACCATCTCAAGATTATACC
TGTGTTATTGTCcccaaacaaaaagaaaatatcattaCACCTTCAGTGTG
TGACCATGACCACATTGtgatcaaaaaagaagaaatgtcACCGGAGCATG
CATTGCTTTTTGGGCTTTCCCTGCTGTGGAATATCCTGATGACGACTCTT
GTTTTGATGATCACGGCGTGCAAgatgagtcccagGCTGAATTATTTCTC
GATATTGTTGGTGATAACGAACCAGTCAAGATGGAAGAATCCAAAATCAG
TGAGGCCCCAAATCCCACCAGATATACAATTATCGAAAACAAGCCAATTA
GCCATTGTCCAACAATTAGAGGACAAAACGATAACAACAACGAAATCAAA
TGTGAAGAATTCGATGTTGATGAGTTTTTGTCAAATGAGACTAATGACTT
TGCTTGCCCGTCAAGCCCTGACTCTGAGCCAGTATCACCATCTGATTCAA
CAATCGTTGAGATCGATAGTAGTTTCCAGATGCACAACGCCACGGCTGAA
AGTAGCGTGGTGGGCAAACCAGCCGATGATGGATACGGGATGATACAAGG
TGGCTCTTTTATTGATGATGAGTTTTTGTTGTCCTCGTGCGCCACCAATG
ATGAGTTAAATGATGAATGCAATATTACTGATGTAGATGATCCTTTTTCT
GAGTTATTTCCAACGTTGCTGAGTGTTTGAGTTATTGTCTGACCTCGATA
GTGTTTAGTTCTTATTGCAGTTTTCTTGATCTTCCTGGGACTAAATTCTA
TTGATTCATTTTGTATGTATCATAGTGAATTAATTTTATCTTAGCTTTAC
ATATtaaatttatttgaatttgaaatccatccatttattttttatatccg
AAAAGTCTGTTATTTATGAACAGcaagttttagatttttatcTCTTTCCT
CTTTTCTCTGACTggcgtttttatttttaatttataagttttttttacta
ttttggaaatattttcctACCTTGTGTTGCTTAAAAATCTCATGAAACAA
CGTCAGAATTATTATCATTTATTAGGAGTAATATTattattttgtatata
tttaaCTTCATTGAAACAAAAGGGcataaatacaacaaaaaaatgttcaa
aactgaaaaaaacccACTCTCCATCTCTTTTGCTGTTAGTCAACAATTCA
TCTTGATTAATTCCATGAGGGATGTAAAGTGATTCATTGAGTAAGACCCC
CTACGTACATTAGATTTAAACTTGGGATGAATAGAACTTTTAATACTCTG
ATGGAAAAGATTCTATAGGACAACTGGTTTAAATGATTATATgaaaaaag
taataagaaaTGCACATCTCCCTTTT
Run BLAST on NCBI

protein sequence of TCONS_00070201-protein

>TCONS_00070201-protein ID=TCONS_00070201-protein|Name=TCONS_00070201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MMKINYFEISRIPTVDAKKVLATIEDDERNPNRKRRRLDNLNVEERILRR
KLKNRVAAQSARDRKKAHMDQLEITLMRVEKENKFLKKSNEELRSQVHQL
MENNAQLRSKLGLTPPASPSQDYTCVIVPKQKENIITPSVCDHDHIVIKK
EEMSPEHALLFGLSLLWNILMTTLVLMITACKMSPRLNYFSILLVITNQS
RWKNPKSVRPQIPPDIQLSKTSQLAIVQQLEDKTITTTKSNVKNSMLMSF
CQMRLMTLLARQALTLSQYHHLIQQSLRSIVVSRCTTPRLKVAWWANQPM
MDTG
Run BLAST on NCBI

transcript from alignment at scaffold_516:108151..111162+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070201 ID=TCONS_00070201|Name=TCONS_00070201|organism=Clytia hemisphaerica|type=transcript|length=3012bp|location=Sequence derived from alignment at scaffold_516:108151..111162+ (Clytia hemisphaerica)
AAATAAGATAACTGTCTGTTGAGGTAAACTTATAtgtttgattttacttg
ctTTGTTGTTGTGCgtgaaaagaaaaatggaatGTCATTATTTTCCCACG
ATGTATCTAATGTAATTTATATTTCATTTtagtgacaaaaatattgactt
aTAGCATCATTACAACTTGCtatataatttaaaaataatgatgaagatca
attattttgaaatatcacGAATCCCTACAGTTGAcgcaaaaaaagtttta
gcAACCATTGAAGATGATGAACGAAATCCTAACCGTAAAAGAAGGAGACT
TGACAACCTGAATGTAGAAGAAAGAATACTCAGGAGGTAATTTCTTTACA
CTTCAGTTGGTTGTATCTTTCATTGAGAACGGTCTGCTTAACCAATCTTC
CAGGATGGTAAGGAAAACTAGTGAGATAAAAATTACAATATCTTTGTTTT
TGGAGAAACANTGGATGGTAAGAAAAACTAGTGAgataaaaattacaata
taaTATCTTTGTTTTTGGAGAAACAAGTTATTTGAAAATGGTTTATTTTT
AGAGAATTTGTGTAATGCCGACATACCTGGTCTGCAAAGTAGGTAGAGTG
ATTTATTTAACCTTACTTTTTACCTTTACTTTATATTTCAATTTCAGGAA
ATTGAAAAACAGAGTTGCTGCCCAAAGTGCACGAGACCGAAAGAAAGCAC
ACATGGACCAACTTGAAATTACACTTATGCGAGTTGAAAAAGaggtttga
ttttgaagaccttaaaagttatttttccaGAAAACTTATTTTATTCATAT
TATGCATTAATCTAGGTACtgacaatttcaaaaatttactttttaaatGG
TTCTTTTTAACATTATTTTACTTACTTGTGCAATTTCAGTCTAATCATAT
TTTTCCTTGTTTCTAATTATTAGaacaaatttttgaagaaaagcaATGAG
GAATTAAGATCACAAGTTCATCAATTAATGGAAAATAATGCACAGCTCAG
ATCAAAGCTTGGCTTAACCCCACCTGCTTCACCATCTCAAGATTATACCT
GTGTTATTGTCcccaaacaaaaagaaaatatcattaCACCTTCAGTGTGT
GACCATGACCACATTGtgatcaaaaaagaagaaatgtcACCGGAGCATGC
ATTGCTTTTTGGGCTTTCCCTGCTGTGGAATATCCTGATGACGACTCTTG
TTTTGATGATCACGGCGTGCAAgatgagtcccaggtagggtttTTGGATA
AAGGTTTTATACTTAAGGGGGTTAATTTTTAATTCTTCgtgtgatttttg
aaatatgcagTGTCACTTTAATTGACTGATGCTTTTAAGCTTTTTTGAGC
ACTGGTACCAGAATTGTGTTGAAAGTGAGCAATAAACCTTTtgtttgaat
tgttttgttttctcaaCTGATCATAATGTTCAATATGTGCAGCTGTCTCA
ATATCTCCTTTCATCAGATTGAAATTAGAGTAGAATTGAATTTCATTGAA
CAGCTGCCCTTACttctaaaataaaagtaaataaaaagttcaattttaaa
aagcttttccCTCTTTTTATTTGCATGTGTTTGCAAATTtcctttaaatt
taaaaatcaNATTTAAAAAGCAAagattaaagaaattttttactTGCTTT
TCCCTCTTTTTATTTGCATGTGTTTGTAAATTtcctttaaatttaaaaat
caacAATTGATTGAACTAGTTCTCTATAGAATTTTCTAGGGTGAAATCCC
CTTTGTAAGCACCATGTTTaatctgtttttcattttccccagGCTGAATT
ATTTCTCGATATTGTTGGTGATAACGAACCAGTCAAGATGGAAGAATCCA
AAATCAGTGAGGCCTCAAATCCCACCAGATATACAATTATCGAAAACAAG
CCAATTAGCCATTGTCCAACAATTAGAGGANATCAGTGAGGCCCCAAATC
CCACCAGATATACAATTATCGAAAACAAGCCAATTAGCCATTGTCCAACA
ATTAGAGGACAAAACGATAACAACAACGAAATCAAATGTGAAGAATTCGA
TGTTGATGAGTTTTTGTCAAATGAGACTAATGACTTTGCTTGCCCGTCAA
GCCCTGACTCTGAGCCAGTATCACCATCTGATTCAACAATCGTTGAGATC
GATAGTAGTTTCCAGATGCACAACGCCACGGCTGAAAGTAGCGTGGTGGG
CAAACCAGCCGATGATGGATACGGGATGATACAAGGTGGCTCTTTTATTG
ATGATGAGTTTTTGTTGTCCTCGTGCGCCACCAATGATGAGTTAAATGAT
GAATGCAATATTACTGATGTAGATGATCCTTTTTCTGAGTTATTTCCAAC
GTTGCTGAGTGTTTGAGTTATTGTCTGACCTCGATAGTGTTTAGTTCTTA
TTGCAGTTTTCTTGATCTTCCTGGGACTAAATTCTATTGATTCATTTTGT
ATGTATCATAGTGAATTAATTTTATCTTAGCTTTACATATtaaatttatt
tgaatttgaaatccatccatttattttttatatccgAAAAGTCTGTTATT
TATGAACAGcaagttttagatttttatcTCTTTCCTCTTTTCTCTGACTg
gcgtttttatttttaatttataagttttttttactattttggaaatattt
tcctACCTTGTGTTGCTTAAAAATCTCATGAAACAACGTCAGAATTATTA
TCATTTATTAGGAGTAATATTattattttgtatatatttaaCTTCATTGA
AACAAAAGGGcataaatacaacaaaaaaatgttcaaaactgaaaaaaacc
cACTCTCCATCTCTTTTGCTGTTAGTCAACAATTCATCTTGATTAATTCC
ATGAGGGATGTAAAGTGATTCATTGAGTAAGACCCCCTACGTACATTAGA
TTTAAACTTGGGATGAATAGAACTTTTAATACTCTGATGGAAAAGATTCT
ATAGGACAACTGGTTTAAATGATTATATgaaaaaagtaataagaaaTGCA
CATCTCCCTTTT

Coding sequence (CDS) from alignment at scaffold_516:108151..111162+

>TCONS_00070201 ID=TCONS_00070201|Name=TCONS_00070201|organism=Clytia hemisphaerica|type=CDS|length=4575bp|location=Sequence derived from alignment at scaffold_516:108151..111162+ (Clytia hemisphaerica)
atgatgaagatcaattattttgaaatatcacGAATCCCTACAGTTGAcgc
aaaaaaagttttagcAACCATTGAAGATGATGAACGAAATCCTAACCGTA
AAAGAAGGAGACTTGACAACCTGAATGTAGAAGAAAGAATACTCAGGAGG
AAATTGAAAAACAGAGTTGCTGCCCAAAGTGCACGAGACCGAAAGAAAGC
ACACATGGACCAACTTGAAATTACACTTATGCGAGTTGAAAAAGagaaca
aatttttgaagaaaagcaATGAGGAATTAAGATCACAAGTTCATCAATTA
ATGGAAAATAATGCACAGCTCAGATCAAAGCTTGGCTTAACCCCACCTGC
TTCACCATCTCAAGATTATACCTGTGTTATTGTCcccaaacaaaaagaaa
atatcattaCACCTTCAGTGTGTGACCATGACCACATTGtgatcaaaaaa
gaagaaatgtcACCGGAGCATGCATTGCTTTTTGGGCTTTCCCTGCTGTG
GAATATCCTGATGACGACTCTTGTTTTGATGATCACGGCGTGCAAgatga
gtcccagGCTGAATTATTTCTCGATATTGTTGGTGATAACGAACCAGTCA
AGATGGAAGAATCCAAAATCAGTGAGGCCCCAAATCCCACCAGATATACA
ATTATCGAAAACAAGCCAATTAGCCATTGTCCAACAATTAGAGGACAAAA
CGATAACAACAACGAAATCAAATGTGAAGAATTCGATGTTGATGAGTTTT
TGTCAAATGAGACTAATGACTTTGCTTGCCCGTCAAGCCCTGACTCTGAG
CCAGTATCACCATCTGATTCAACAATCGTTGAGATCGATAGTAGTTTCCA
GATGCACAACGCCACGGCTGAAAGTAGCGTGGTGGGCAAACCAGCCGATG
ATGGATACGGGATGAatgatgaagatcaattattttgaaatatcacGAAT
CCCTACAGTTGAcgcaaaaaaagttttagcAACCATTGAAGATGATGAAC
GAAATCCTAACCGTAAAAGAAGGAGACTTGACAACCTGAATGTAGAAGAA
AGAATACTCAGGAGGAAATTGAAAAACAGAGTTGCTGCCCAAAGTGCACG
AGACCGAAAGAAAGCACACATGGACCAACTTGAAATTACACTTATGCGAG
TTGAAAAAGagaacaaatttttgaagaaaagcaATGAGGAATTAAGATCA
CAAGTTCATCAATTAATGGAAAATAATGCACAGCTCAGATCAAAGCTTGG
CTTAACCCCACCTGCTTCACCATCTCAAGATTATACCTGTGTTATTGTCc
ccaaacaaaaagaaaatatcattaCACCTTCAGTGTGTGACCATGACCAC
ATTGtgatcaaaaaagaagaaatgtcACCGGAGCATGCATTGCTTTTTGG
GCTTTCCCTGCTGTGGAATATCCTGATGACGACTCTTGTTTTGATGATCA
CGGCGTGCAAgatgagtcccagGCTGAATTATTTCTCGATATTGTTGGTG
ATAACGAACCAGTCAAGATGGAAGAATCCAAAATCAGTGAGGCCCCAAAT
CCCACCAGATATACAATTATCGAAAACAAGCCAATTAGCCATTGTCCAAC
AATTAGAGGACAAAACGATAACAACAACGAAATCAAATGTGAAGAATTCG
ATGTTGATGAGTTTTTGTCAAATGAGACTAATGACTTTGCTTGCCCGTCA
AGCCCTGACTCTGAGCCAGTATCACCATCTGATTCAACAATCGTTGAGAT
CGATAGTAGTTTCCAGATGCACAACGCCACGGCTGAAAGTAGCGTGGTGG
GCAAACCAGCCGATGATGGATACGGGATGAatgatgaagatcaattattt
tgaaatatcacGAATCCCTACAGTTGAcgcaaaaaaagttttagcAACCA
TTGAAGATGATGAACGAAATCCTAACCGTAAAAGAAGGAGACTTGACAAC
CTGAATGTAGAAGAAAGAATACTCAGGAGGAAATTGAAAAACAGAGTTGC
TGCCCAAAGTGCACGAGACCGAAAGAAAGCACACATGGACCAACTTGAAA
TTACACTTATGCGAGTTGAAAAAGagaacaaatttttgaagaaaagcaAT
GAGGAATTAAGATCACAAGTTCATCAATTAATGGAAAATAATGCACAGCT
CAGATCAAAGCTTGGCTTAACCCCACCTGCTTCACCATCTCAAGATTATA
CCTGTGTTATTGTCcccaaacaaaaagaaaatatcattaCACCTTCAGTG
TGTGACCATGACCACATTGtgatcaaaaaagaagaaatgtcACCGGAGCA
TGCATTGCTTTTTGGGCTTTCCCTGCTGTGGAATATCCTGATGACGACTC
TTGTTTTGATGATCACGGCGTGCAAgatgagtcccagGCTGAATTATTTC
TCGATATTGTTGGTGATAACGAACCAGTCAAGATGGAAGAATCCAAAATC
AGTGAGGCCCCAAATCCCACCAGATATACAATTATCGAAAACAAGCCAAT
TAGCCATTGTCCAACAATTAGAGGACAAAACGATAACAACAACGAAATCA
AATGTGAAGAATTCGATGTTGATGAGTTTTTGTCAAATGAGACTAATGAC
TTTGCTTGCCCGTCAAGCCCTGACTCTGAGCCAGTATCACCATCTGATTC
AACAATCGTTGAGATCGATAGTAGTTTCCAGATGCACAACGCCACGGCTG
AAAGTAGCGTGGTGGGCAAACCAGCCGATGATGGATACGGGATGAatgat
gaagatcaattattttgaaatatcacGAATCCCTACAGTTGAcgcaaaaa
aagttttagcAACCATTGAAGATGATGAACGAAATCCTAACCGTAAAAGA
AGGAGACTTGACAACCTGAATGTAGAAGAAAGAATACTCAGGAGGAAATT
GAAAAACAGAGTTGCTGCCCAAAGTGCACGAGACCGAAAGAAAGCACACA
TGGACCAACTTGAAATTACACTTATGCGAGTTGAAAAAGagaacaaattt
ttgaagaaaagcaATGAGGAATTAAGATCACAAGTTCATCAATTAATGGA
AAATAATGCACAGCTCAGATCAAAGCTTGGCTTAACCCCACCTGCTTCAC
CATCTCAAGATTATACCTGTGTTATTGTCcccaaacaaaaagaaaatatc
attaCACCTTCAGTGTGTGACCATGACCACATTGtgatcaaaaaagaaga
aatgtcACCGGAGCATGCATTGCTTTTTGGGCTTTCCCTGCTGTGGAATA
TCCTGATGACGACTCTTGTTTTGATGATCACGGCGTGCAAgatgagtccc
agGCTGAATTATTTCTCGATATTGTTGGTGATAACGAACCAGTCAAGATG
GAAGAATCCAAAATCAGTGAGGCCCCAAATCCCACCAGATATACAATTAT
CGAAAACAAGCCAATTAGCCATTGTCCAACAATTAGAGGACAAAACGATA
ACAACAACGAAATCAAATGTGAAGAATTCGATGTTGATGAGTTTTTGTCA
AATGAGACTAATGACTTTGCTTGCCCGTCAAGCCCTGACTCTGAGCCAGT
ATCACCATCTGATTCAACAATCGTTGAGATCGATAGTAGTTTCCAGATGC
ACAACGCCACGGCTGAAAGTAGCGTGGTGGGCAAACCAGCCGATGATGGA
TACGGGATGAatgatgaagatcaattattttgaaatatcacGAATCCCTA
CAGTTGAcgcaaaaaaagttttagcAACCATTGAAGATGATGAACGAAAT
CCTAACCGTAAAAGAAGGAGACTTGACAACCTGAATGTAGAAGAAAGAAT
ACTCAGGAGGAAATTGAAAAACAGAGTTGCTGCCCAAAGTGCACGAGACC
GAAAGAAAGCACACATGGACCAACTTGAAATTACACTTATGCGAGTTGAA
AAAGagaacaaatttttgaagaaaagcaATGAGGAATTAAGATCACAAGT
TCATCAATTAATGGAAAATAATGCACAGCTCAGATCAAAGCTTGGCTTAA
CCCCACCTGCTTCACCATCTCAAGATTATACCTGTGTTATTGTCcccaaa
caaaaagaaaatatcattaCACCTTCAGTGTGTGACCATGACCACATTGt
gatcaaaaaagaagaaatgtcACCGGAGCATGCATTGCTTTTTGGGCTTT
CCCTGCTGTGGAATATCCTGATGACGACTCTTGTTTTGATGATCACGGCG
TGCAAgatgagtcccagGCTGAATTATTTCTCGATATTGTTGGTGATAAC
GAACCAGTCAAGATGGAAGAATCCAAAATCAGTGAGGCCCCAAATCCCAC
CAGATATACAATTATCGAAAACAAGCCAATTAGCCATTGTCCAACAATTA
GAGGACAAAACGATAACAACAACGAAATCAAATGTGAAGAATTCGATGTT
GATGAGTTTTTGTCAAATGAGACTAATGACTTTGCTTGCCCGTCAAGCCC
TGACTCTGAGCCAGTATCACCATCTGATTCAACAATCGTTGAGATCGATA
GTAGTTTCCAGATGCACAACGCCACGGCTGAAAGTAGCGTGGTGGGCAAA
CCAGCCGATGATGGATACGGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043724XLOC_043724Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070201-exon-scaffold_516-1491911889:108151..108173TCONS_00070201-exon-scaffold_516-1491911889:108151..108173Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:108151..108173TCONS_00070201-exon-scaffold_516-1510915933:108151..108173Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:108151..108173TCONS_00070201-exon-scaffold_516-1575043694:108151..108173Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1491911889:108283..108486TCONS_00070201-exon-scaffold_516-1491911889:108283..108486Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:108283..108486TCONS_00070201-exon-scaffold_516-1510915933:108283..108486Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:108283..108486TCONS_00070201-exon-scaffold_516-1575043694:108283..108486Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1491911889:108798..108894TCONS_00070201-exon-scaffold_516-1491911889:108798..108894Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:108798..108894TCONS_00070201-exon-scaffold_516-1510915933:108798..108894Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:108798..108894TCONS_00070201-exon-scaffold_516-1575043694:108798..108894Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1491911889:109074..109384TCONS_00070201-exon-scaffold_516-1491911889:109074..109384Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:109074..109384TCONS_00070201-exon-scaffold_516-1510915933:109074..109384Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:109074..109384TCONS_00070201-exon-scaffold_516-1575043694:109074..109384Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1491911889:109943..110011TCONS_00070201-exon-scaffold_516-1491911889:109943..110011Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:109943..110011TCONS_00070201-exon-scaffold_516-1510915933:109943..110011Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:109943..110011TCONS_00070201-exon-scaffold_516-1575043694:109943..110011Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1491911889:110091..111162TCONS_00070201-exon-scaffold_516-1491911889:110091..111162Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1510915933:110091..111162TCONS_00070201-exon-scaffold_516-1510915933:110091..111162Clytia hemisphaericaexon
TCONS_00070201-exon-scaffold_516-1575043694:110091..111162TCONS_00070201-exon-scaffold_516-1575043694:110091..111162Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070201-proteinTCONS_00070201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:108151..111162 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.27046	0.0386308	4.76353	0.037736	0.00257086	0.00344653	0.0391009	0.000447682	106.882	120.847	92.296	126.181	160.794	188.85	125.848	147.956	77.892	93.2055	104.829	114.122	41.6038	52.5996	35.1761	41.4308	36.5796	0.0604854	31.8825	25.2935	40.6276	23.1625
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Blast
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BLAST of TCONS_00070201 vs. Swiss-Prot (Human)
Match: XBP1 (X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.131e-18
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 1 
Query:  175 RKRRRLDNLNVEERILRRKLKNRVAAQSARDRKKAHMDQLEITLMRVEKENKFLKKSNEELRSQVHQLMENNAQLRSKLGL 417
            RKR+RL +L+ EE+ LRRKLKNRVAAQ+ARDRKKA M +LE  ++ +E+EN+ L   N+ LR + H L+  N +LR +LG+
Sbjct:   59 RKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGM 139
The following BLAST results are available for this feature:
BLAST of TCONS_00070201 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XBP16.131e-1854.32X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE... [more]
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