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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070267 ID=TCONS_00070267|Name=TCONS_00070267|organism=Clytia hemisphaerica|type=transcript|length=1496bp
NNTTTCACTTTAATTTAATGGTCTAGTAGTTGTCTTTTATTTTACCAATT
TCTTTGGGAATGTATGGAGTTGAAAGGAGACTTATCAAAGTTGATGTCTG
CGAAGTTTCGATCCATGATTTTAAGTATTTTGTTAGCAATCATAAAGATT
TCTGTAATGCAATGCATATTATTTGGATTTCATAGAAATATAAAATAGGT
TTTTGATCTTCCCTTGGCTTCCACTACTAAGAACTTTGTACTCTTTAAAA
TGTGGATTATTATGCTTTTTAAATTGGAAATTGTAACTATAACTTAGCTT
TATAATCTCATGCAGGATAggctcttctttttcttttcccaCAAGAACAC
TTTTCTGAGCATTTGACAACCCTTGTTTTGCAGGGACATCCTTTTCTGAG
ATTGTAATCTTTTCTACAACAGGTATTTTTAcaattgcaaaataaatcat
ccatttttcttttccttcttcttAAAtgactattttcaagattttgagaa
cttttatttttgaaaattttccgaaatcTGTTTTTAGTGCCCGGGTCCAC
TTAACCAACTTCCTTCCTTTTCGCgagaatactttaatgggataaacttt
cgcggatttgggcggtgtcatccgcgaaattaagtcccattggaaatttg
gaagggcctcatccgcgaaatatttcaagtaaatactatttgaatggtta
cttgcctCAAAGAAGCGCAAACAAGACGACTcggagtcgaaaatttcgca
ataTATTTGATTGGACCTTAGAAAAACTGGCTCTAAGggccagggcaaac
cagtccaacacgattttccaatgttggatgaaatgtttgatggaaaaact
tgcgttggatgaagcgaaaatcaaggccggggcaaaccgatccaacattt
catccgacatgacttggaaaaaatgaaaattcaaaataataaagaaaaaa
ctaccaccaaaccaatccaacacgaaaaattacacaattcaatGAGAGAG
CTTCTTTGATCTCGCCGCAAATGTTTAGCATTTCTTGGAGCTCTTTTTCA
TCAAACGTGTCAAGCAGTTTAGAggcctggacttcaatggcctTTTTGCT
CGTTCCAGATGCAAGACTCATCGTATCCATGACCTTTCTGTTGCGTTTTG
CCACTGTCCTTTTGTGTGCTTGGTCAGATGGAACATAGCTCGTCGTTATT
TTAGTAAACGTAACgggctaaaattttgaaaattgaaaaacctGAATTAA
TATTTGAATATTGTTTGAATTTTCTTAGAAGTGTAAAATTATAAAAGATA
ATGGTAAAATCTTGTGATTCATTTTATGATCCGTccattttcatttggat
aatCACGTTTTAAACATTTCATTACACTCGAAAGTTACAAGTAGAGCAAA
TTGACAAAGCGATTTCTGAACTTTTAAACTGTTTCATTACTTTTATGCAT
TCgagagaaaaaattttaatggttatataaatgaaaatggacgaac Run BLAST on NCBI transcript from alignment at scaffold_516:424873..426368 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070267 ID=TCONS_00070267|Name=TCONS_00070267|organism=Clytia hemisphaerica|type=transcript|length=1496bp|location=Sequence derived from alignment at scaffold_516:424873..426368 (Clytia hemisphaerica)
gttcgtccattttcatttatataaccattaaaattttttctctcGAATGC
ATAAAAGTAATGAAACAGTTTAAAAGTTCAGAAATCGCTTTGTCAATTTG
CTCTACTTGTAACTTTCGAGTGTAATGAAATGTTTAAAACGTGattatcc
aaatgaaaatggACGGATCATAAAATGAATCACAAGATTTTACCATTATC
TTTTATAATTTTACACTTCTAAGAAAATTCAAACAATATTCAAATATTAA
TTCaggtttttcaattttcaaaattttagcccGTTACGTTTACTAAAATA
ACGACGAGCTATGTTCCATCTGACCAAGCACACAAAAGGACAGTGGCAAA
ACGCAACAGAAAGGTCATGGATACGATGAGTCTTGCATCTGGAACGAGCA
AAAaggccattgaagtccaggccTCTAAACTGCTTGACACGTTTGATGAA
AAAGAGCTCCAAGAAATGCTAAACATTTGCGGCGAGATCAAAGAAGCTCT
CTCattgaattgtgtaatttttcgtgttggattggtttggtggtagtttt
ttctttattattttgaattttcattttttccaagtcatgtcggatgaaat
gttggatcggtttgccccggccttgattttcgcttcatccaacgcaagtt
tttccatcaaacatttcatccaacattggaaaatcgtgttggactggttt
gccctggccCTTAGAGCCAGTTTTTCTAAGGTCCAATCAAATAtattgcg
aaattttcgactccgAGTCGTCTTGTTTGCGCTTCTTTGaggcaagtaac
cattcaaatagtatttacttgaaatatttcgcggatgaggcccttccaaa
tttccaatgggacttaatttcgcggatgacaccgcccaaatccgcgaaag
tttatcccattaaagtattctcGCGAAAAGGAAGGAAGTTGGTTAAGTGG
ACCCGGGCACTAAAAACAgatttcggaaaattttcaaaaataaaagttct
caaaatcttgaaaatagtcaTTTaagaagaaggaaaagaaaaatggatga
tttattttgcaattgTAAAAATACCTGTTGTAGAAAAGATTACAATCTCA
GAAAAGGATGTCCCTGCAAAACAAGGGTTGTCAAATGCTCAGAAAAGTGT
TCTTGtgggaaaagaaaaagaagagccTATCCTGCATGAGATTATAAAGC
TAAGTTATAGTTACAATTTCCAATTTAAAAAGCATAATAATCCACATTTT
AAAGAGTACAAAGTTCTTAGTAGTGGAAGCCAAGGGAAGATCAAAAACCT
ATTTTATATTTCTATGAAATCCAAATAATATGCATTGCATTACAGAAATC
TTTATGATTGCTAACAAAATACTTAAAATCATGGATCGAAACTTCGCAGA
CATCAACTTTGATAAGTCTCCTTTCAACTCCATACATTCCCAAAGAAATT
GGTAAAATAAAAGACAACTACTAGACCATTAAATTAAAGTGAAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070267-exon-scaffold_516-1491911889:424873..426368 | TCONS_00070267-exon-scaffold_516-1491911889:424873..426368 | Clytia hemisphaerica | exon |
| TCONS_00070267-exon-scaffold_516-1510915933:424873..426368 | TCONS_00070267-exon-scaffold_516-1510915933:424873..426368 | Clytia hemisphaerica | exon |
| TCONS_00070267-exon-scaffold_516-1575043694:424873..426368 | TCONS_00070267-exon-scaffold_516-1575043694:424873..426368 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_516 | supercontig | scaffold_516:424873..426368 . |
Blast
The following BLAST results are available for this feature:
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