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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070317 ID=TCONS_00070317|Name=TCONS_00070317|organism=Clytia hemisphaerica|type=transcript|length=1008bp
ATCTTCCGTAAAAGCCCGGGCTATAAAATATACGGTCTATCACGTTGCTA
TGTGAacggatttaaagaaaaatggcggattcccgatgtaaacaaaagga
acaaaaattagaaaaagtttattttcccaatttttcccTCCCGATTAAaa
ccattttactttttatatagaCATATAATGATTAATAACTGAATACTTTA
AAAGGAAGAAGCTAAGCTCGAAGGCCAAAATCATTTAGACAGAAAACATG
AATTTAGGGAGGGCAAAAAACTGGTacggtaaaaaatgaaaatatcagcc
GCTCAATATTAAAGGAACCCAAAGAAATTGAAGATAGGataatgtcaata
tttttataatgagGTTTAGTGTTAATTGAAGAGGTGCTATTGATAAATTT
AATGTGTATAAATCTGAATGATATGATGGTGTCAATAACTATAAACTTTT
CCTATTTACaacataataaaaatgatggaaaataaagtgaaagtgtattt
ttaattttgcttaTCATTGTTCTAGAGTTCTTGGTTAAAAAACAACATTG
tgataaggaaaaagtctaataTATAGTCATTGTCAATGATATTCAACCAT
ACGTTTCAAAATGATAATGTACACTATTGTACGTACCAAATATTCATTGT
TGCTGCTTCTTCTTGTGCAGCACAGCCCGCAACCAAAGTAAAGTATCAAA
GAGAAACgtataaggcggcaatcacaaatatcttcattttgcgtcctcgt
tgggtctaaaatgTGAGTCGGTCgttcggtctaaaaagtgagtcggtcNT
GCAGCACAGCCCGCAACCAAAGTTAAGTATCAAAGAGAAACgtataaggc
ggcaatcacaaatatcttcattttgcgtcctcgttgggtctaaaatgtga
gtcggtcggtcggtctaaaatgtgagtcggtcggtcggtctaactAAAAC
gtgagtcagtcggtcggtctacaaagtgaggcggtcggtcggtctacaaa
gtgaggtg Run BLAST on NCBI transcript from alignment at scaffold_52:150287..151294 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070317 ID=TCONS_00070317|Name=TCONS_00070317|organism=Clytia hemisphaerica|type=transcript|length=1008bp|location=Sequence derived from alignment at scaffold_52:150287..151294 (Clytia hemisphaerica)
cacctcactttgtagaccgaccgaccgcctcactttgtagaccgaccgac
tgactcacGTTTTagttagaccgaccgaccgactcacattttagaccgac
cgaccgactcacattttagacccaacgaggacgcaaaatgaagatatttg
tgattgccgccttatacGTTTCTCTTTGATACTTAACTTTGGTTGCGGGC
TGTGCTGCANgaccgactcactttttagaccgaacGACCGACTCAcattt
tagacccaacgaggacgcaaaatgaagatatttgtgattgccgccttata
cGTTTCTCTTTGATACTTTACTTTGGTTGCGGGCTGTGCTGCACAAGAAG
AAGCAGCAACAATGAATATTTGGTACGTACAATAGTGTACATTATCATTT
TGAAACGTATGGTTGAATATCATTGACAATGACTATAtattagacttttt
ccttatcaCAATGTTGTTTTTTAACCAAGAACTCTAGAACAATGAtaagc
aaaattaaaaatacactttcactttattttccatcatttttattatgttG
TAAATAGGAAAAGTTTATAGTTATTGACACCATCATATCATTCAGATTTA
TACACATTAAATTTATCAATAGCACCTCTTCAATTAACACTAAACctcat
tataaaaatattgacattatCCTATCTTCAATTTCTTTGGGTTCCTTTAA
TATTGAGCggctgatattttcattttttaccgtACCAGTTTTTTGCCCTC
CCTAAATTCATGTTTTCTGTCTAAATGATTTTGGCCTTCGAGCTTAGCTT
CTTCCTTTTAAAGTATTCAGTTATTAATCATTATATGtctatataaaaag
taaaatggttTTAATCGGGAgggaaaaattgggaaaataaactttttcta
atttttgttccttttgtttacatcgggaatccgccatttttctttaaatc
cgtTCACATAGCAACGTGATAGACCGTATATTTTATAGCCCGGGCTTTTA
CGGAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070317-exon-scaffold_52-1491911889:150287..151294 | TCONS_00070317-exon-scaffold_52-1491911889:150287..151294 | Clytia hemisphaerica | exon |
| TCONS_00070317-exon-scaffold_52-1510915933:150287..151294 | TCONS_00070317-exon-scaffold_52-1510915933:150287..151294 | Clytia hemisphaerica | exon |
| TCONS_00070317-exon-scaffold_52-1575043694:150287..151294 | TCONS_00070317-exon-scaffold_52-1575043694:150287..151294 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_52 | supercontig | scaffold_52:150287..151294 . |
Blast
The following BLAST results are available for this feature:
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