TCONS_00070387 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070387
Unique NameTCONS_00070387
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4021

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070387 ID=TCONS_00070387|Name=TCONS_00070387|organism=Clytia hemisphaerica|type=transcript|length=4021bp
ataaaATATACATAAGTTACAATTAAAgaaagtattttgaaaataaaaat
gaaagaagaaagcTTATTCCGTGTTTTTGTTGGTGGTCTTGCCCCTGAAG
TCAAGGAAGAGGAACTAAGAGATCGATTCAAGAGCTTTGGTACGACGTCA
GATGTATGTTTGTTTCAGAAAAAGACTTCAGATGgggTAATCTCAAAGAC
ATTTGGTTATGTTAACCTCACCACGACTGAGCAACAACTCAGGAAATGTT
TCGCAATCTTTGGTGGCACGAAATGGAAAGGACACAGCCTGAAAGTGCAA
CTGGCCAAAGACGATTTCATGAAAAGGTTACAAAAAGAATGGGAAAATCC
TGAACCAGTTAAAATCTCTAAATCAAGAAAACGTAAACAGATCGATCCTA
TCCGCAGCTACGAAGAATATATTGCTAAAAGTAAAAGCACAAAGAAAGCC
ATTCCCGGTATCCCTTTGGAAGGTGAAAAGAACTGGGTCATCGGCAAGTT
TGGTCGACCGTTACCCATTGTCCATATCAATGGTAAAGGCTCTGGCAGGA
AGTTTTTGAAACACGATCCATCAAAGCATTGCCATTGCATCCGAAGAATA
GCTACTGATGTGCCCGAGGACAGAATTGATGGATTGACTTGGGAATTGGA
TGAATGCCAACATCTTCAAGATCGTATTATCAGAAATAAGAGCATAACCA
AGAAAAAGGATATTGCGAACGGCGTTGTTGAGCTTGATGGTGTCGATGAG
GAAAAAGAATCGcctaagaaaaagaagaaaaagaaaaaagccaGTTTGGA
GAGTATGGAAGATGTGGTGAATGAAAACGAGAGAGATACTGCTTTATTAA
AGACTAAAGATTTGAATGGAAATGATTCTGAGGAACTTTGTAATGGTGCT
GGAGAACTTGAAAATGACTTTGAAATAGCTTCTTGTGAGAATATTGAAGA
TAAATCTGACAATGAATCAATGGAAATTTCTTCGAATATAAACAATATAT
CTGAGGATAAAGAAAGTGAGGAATCGTCTGAATCTGAAGACGAAGAAGTG
CTCGTAAACGGTACTCTCAAAAATATTGGCGATGAACCGGAAGATAACGG
CGTTTCAATTTCCTCTGAATCTGAAGTCGACAGTGAAGACGAAGAAGATT
CTCAATCAGACAGTGGAACGATTCCAGGTCAACCGACTTTCCATACAACT
TCAATGATTGCTTCAACTCCATTTGTTGTTCCTTGCGTTAAGAAAAATCT
ACGCGAGAACCCGGGTGATAACATTGTAGCTACACCAAAGGTAGCTCACA
ATAACAGCAGTCTTGGTAAAAGCATTATCGAACAGTTGAAATCGAGATCA
ATGGCTGAACCATCAACAACAGGAACACCATTACCAGAATCTAAGGACTC
GAATGTAGATAGTGGTTCTGAATCTGAAGGTGAAAGAACGAATAACTTTT
TCGACTTTGATATCAACGATATGAATAAAGGACCTAAATCCAATGGAGGA
GTTTCATCGAGTAATGAGTCTGACGAGTCTACCGATGACAGTGAAGGTGA
GGAACCCATCAATCTGTTTGATTTCGAATTCGAGAATCTAAAAGGAAAAC
AAGGAACAGAGTTTCTTAGTAGTTTTGAATTGCGCTGGGAAAAAGAAGAT
GTGGGAGAAGATTCAAGTGGGGAGAGTTCAAGTGAAGACTCTGAAACGGA
TAGCGATAAGTCACCCAAGGCGTCGAAAGAGGGTGAAAAAGCTGTGCCAG
AAGCAAGTTCTGATGAACCCGTTGAGAGTGAATCTCCCCAAGAAGATAAT
GCGGAACcagtcaaaaagaaaaagaaaaaatcgagaaaaGATACCGAAGA
TGAACAAGAAGAAATATCTGAAACAAAGTCTTCttcgaaaaagaagaaga
aagagaaAGAATCGACATTGAGTTCGAATGATatagatgaaaatttgaaa
ctaaACCTTGAAATTGACGAATCCGCCACACaagaaatgaaatcaaaaaa
gaaaaagaagaaaaccgaaaaagaaaatgaaaatgaaaccgAAGAATCGA
CAGCTTCTACGAAGAAAGAGAAacgcaaaaagaaaaaagaaaaatccgcA
TGCGAGTCACAGGTCAAACACCATAAACCGCAAGATTCCGAACAGTTACG
ACAAAAATCAGTCGAAGCTCATAACCAACGCACGCAACAGAATAAAGAGC
TCATACAAAACGCACTTCGGGGATTGGACACGAAGGACTCGTCATCTGCG
AACAATAAAATACGATTCAGCGACACGGACGACGATGATGACGAAGTCAC
CTTCCAAAACTTGACGACAAATGAAGCATCGAGTAAAAATGATAGTGATG
ACAAAGGAACGAAAACTAAATCTAACAAAGACGAGAAGAAGAGTGCACTT
TGGGATGGTGATAGTGACGAGTCAGATGATGGAGGGACGATGACACGAAC
GAAACATAAAGATGAAAAGACAGTCGATTTCCTTGGTGATGAAAACGATG
AAGATGATGAAGATGAGGATGAAAACAGATTTTCAGTCAAACCACAATTT
CAAGGAGAACACGGCAAAAAGCTTTTCAAAATGCAAATGCATTATGGTGG
TGATGATCGTTTCCGGATGGACGAACGGTTTGCCGAAGATGACAACGGCG
GCGATACTGATTCAGAAGATGAAGGCGANGACGAGTCAGATGATGGAGGG
ACGATGACACGAACGAAACATAAAGATGAAAAGACAGTCGATTTCCTTGG
TGATGAAAACGATGAAGATGATGAAGATGAGGATGAAAACAGATTTTCAG
TCAAACCACAATTTCAAGGAGAACACGGCAAAAAGCTTTTCAAAATGCAA
ATGCATTATGGTGGTGATGATCGTTTCCGGATGGACGAACGGTTTGCCGA
AGATGACAACGGCGGCGATACTGATTCAGAAGATGAAggcgaaaaatcag
aaaacaagaAGAGAAGTATAGAAAGAGAAGACGAAgaaacgaaaaatttg
aatgCAGAAGAAGAGAAGGAGCGGAATATGTCTGTACTGGAAAGCATCCT
TGGCAAAAGCTTGAAACACaacaaatcaaagaaagaattgaaaaaagaat
taattgCTACATCTGCCAACCCATACCAACGATATGATCCAACAAAATCA
GACCATACCGAACTCGAAGTTGAAAAGGAAGAGAAACCTTCAAACAGCAA
AAAATTAAACGAAACATCAGTAGGAGAGAAAGATGTCGAAGAGGATGAAG
CGAACCCTGTACCCGAAGTCTCCAAAGAACGTTTCTACAAAGTTGAAACT
TCACTGAAATCACTCTTCTCCGGCACTGCTACTGCTGCTGAGAGCGAGGA
CAAGCCTGCACCAGCTTTTACATTTTTGTCTGCTGCGCCAACGAACGATG
ACGAGGAAGATGACTCTGGTAAAGTTGTAAATAACACCATGGATGTTGAC
GATGATGATGGAGAAGATGAAGAAACTGTTGATAAAGCCAAACCCATCAA
AGAATTAAGCTGGAAAAAAGGTTTACGGGAAGATCGTGACAACAGGGACG
TCTCTATGgaaaacgaaaaagaagaagagtCGGAAGAAAAAACGAAAGAA
GGAGAAGGAAAAAGTTCTTCTGCTGGTggattcttcttcttcaaagaaaa
tgatgaaCGGCTGTTAAAAGGTGCAAGTTTCATGCGCTCAGAAGGATTGG
AAGAGATCACAAAACAATGGGAAGATATTCGACAAGGACTACGCGAGgAC
TTTAGAAAGAAGCACAAAGATGCTGTCCGACGCGTCCGAAAAATGAAAGA
ACGGAAAAGAGTACCTAACAACAGGTAgccaaaattattattttttataa
acttAAACCATATTTTTATCCCCCAAGAATActttataacttttttttac
ttttttattttatcgggttgaaaagatttttggtttattttgattCGAAA
ATTGAATCTAACTGTCTCAAATTATCTTTAACTACTCTAACATTTCTTGG
CATTTGCTGACAAAATCTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_55:66620..76962-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070387 ID=TCONS_00070387|Name=TCONS_00070387|organism=Clytia hemisphaerica|type=transcript|length=10343bp|location=Sequence derived from alignment at scaffold_55:66620..76962- (Clytia hemisphaerica)
ATAAAATATACATAAGTTACAATTAAAGAAAGTATTTTGAAAATAAAAAT
GAAAGAAGAAAGCTTATTCCGTGTTTTTGTTGGTGGTCTTGCCCCTGAAG
TCAAGGAAGAGGAACTAAGGTAAAAAGATTATGCTTTGTTATATCTTTTA
ACGAATTTAAGGAGAGTTGAGTCATGGCCTCAAAAGATCTATTTCAATAC
GCTGTTCCAATGAATTTCCATACAGGAGATACAGGTGGGTGGACGAACCT
TTTCAAGTGAAAACAAATTTCTTGGAAAAGTGTAGATACCCCCTGAAAAA
TGGCAAAATTTGCAAAAGAACCCTTGGAAAAATTTTTATCTCTTATAGTG
AGGGTTTTTCCCCTGGAAAAATGAGAAAACACTTCTTACACCCCCTGGAA
ATTCTTCTCGGATTACCCCCAGGAAATGTTCGTCCACCCCCTGTATGGTC
ATAAAATGGAATGGCCCAATCTTTGCACGGGACATAGATTCTCTCATCTA
ACTCAGAATCTTACTCAGTACGTAAAAACAATGAAAGTTTCATATTGTGA
ACATGAACTTTGTATCATACTTTCAGAGATCGATTCAAGAGCTTTGGTAC
GACGTCAGATGTATGTTTGTTTCAGAAAAAGACTTCAGATGGTATGACGT
TTAAAAGCTTTCAAAGGATAATCAAACAAATGGATTTATATTAAAGAATC
TGCAGTCAAAAAATCTCAAATCATCTGTTGTTCCTTATTAAACATTAGAT
ACTACCAATTTTCTGGCATCTCCATTTATGTTGCAAATGGTTTCCCTAAA
GTGCCAATCATTGTAGTGGGTGGTTGTACTTGATGGGGAATCATTAGTGA
TAACAGTACTTTACTTTTGGGTTAATTTGTTTTCTGAAAATTGCAAAACT
TAAACCGTAGCTTATCCTACAATAAGAAACGTATAAGAAAGGCATATGAT
CTTTAAAACAACTTCATGTTTTGTCATTCATTTACTTAAATTTTGAGATG
CAAAACTTTGCAAGCTTCGCCTTCTTTCGAGATTACTTTATTCACTACCT
CAAATTGTTCATATATTTTTTCTTTTCTTTTTTTCAGGGGTAATCTCAAA
GACATTTGGTTATGTTAACCTCACCACGACTGAGCAACAACTCAGGAAAT
GTATGTAAAGATTTGAAAGCGATTGTAATTTTTTGAGATTTGTTTCGTGT
GAGAATTGTTTCATTCGTCTTGTATTTGCTTCCATTGAGCTCTTTCGAAT
AGTTTCGCACACTGTATTCAGGGACTCTAGGCTGCCGTTTTACATGAGAA
GAGTGGTCTTTTTTTTATCTTTTATATACTTTTTGAATTAGGTTTCGCAA
TCTTTGGTGGCACGAAATGGAAAGGACACAGCCTGAAAGTGCAACTGGCC
AAAGACGATTTCATGAAAAGGTAACCCTATCTTATGAAGTTTTATGAAAA
AAGTTTAATGTAAGTAAAAAATGTAAGTAATCGATATTATATAAGTCATA
GTACTAAATTCAAGGAATGATATTATTGCGCATAATTGAATTTTCACAAT
TCGACCTAAAGTTGACCTAGAAACTTTTCAGCAAACCAAGATTTACTAGG
CTTCTTCGTTTCGAGTGTAAAACTCCTAATGAGAATAAGACCTAAAATCC
CGGAGGTTAAAAGAACTACAATTTCCAATAATCATTTATTTATACACACT
CATAGGTTACAAAAAGAATGGGAAAATCCTGAACCAGTTAAAATCTCTAA
ATCAAGAAAACGTAAACAGATCGATCCTATCCGCAGCTACGAAGAATATA
TTGCTAAAAGTAAAAGCACAAAGAAAGCCATTCCCGGTATCCCTTTGGAA
GGTGAAAAGAACTGGGTCATCGGCAAGTTTGGTCGACCGTTACCCATTGT
CCATATCAATGGTAAAGGCTCTGGCAGGAAGTTTTTGAAACACGATCCAT
CAAAGCATTGCCATTGCATCCGAAGAATAGCTACTGATGTGCCCGAGGAC
AGAATTGATGGATTGACTTGGGAATTGGATGAATGCCAACATCTTCAAGA
TCGTATTATCAGAAATAAGAGCATAACCAAGAAAAAGGATATTGCGAACG
GCGTTGTTGAGCTTGATGGTGTCGATGAGGAAAAAGAATCGCCTAAGAAA
AAGAAGAAAAAGAAAAAAGCCAGTTTGGAGAGTATGGAAGATGTGGTGAA
TGAAAACGAGAGAGATACTGCTTTATTAAAGACTAAAGATTTGAATGGAA
ATGATTCTGAGGAACTTTGTAATGGTGCTGGAGAACTTGAAAATGACTTT
GAAATAGCTTCTTGTGAGAATATTGAAGATAAATCTGACAATGAATCAAT
GGAAATTTCTTCGAATATAAACAATATATCTGAGGATAAAGAAAGTGAGG
AATCGTCTGAATCTGAAGACGAAGAAGTGCTCGTAAACGGTACTCTCAAA
AATATTGGCGATGAACCGGAAGATAACGGCGTTTCAATTTCCTCTGAATC
TGAAGTCGACAGTGAAGACGAAGAAGATTCTCAATCAGACAGTGGAACGA
TTCCAGGTCAACCGACTTTCCATACAACTTCAATGATTGCTTCAACTCCA
TTTGTTGTTCCTTGCGTTAAGAAAAATCTACGCGAGAACCCGGGTGATAA
CATTGTAGCTACACCAAAGGTAGCTCACAATAACAGCAGTCTTGGTAAAA
GCATTATCGAACAGTTGAAATCGAGATCAATGGCTGAACCATCAACAACA
GGAACACCATTACCAGAATCTAAGGACTCGAATGTAGATAGTGGTTCTGA
ATCTGAAGGTGAAAGAACGAATAACTTTTTCGACTTTGATATCAACGATA
TGAATAAAGGACCTAAATCCAATGGAGGAGTTTCATCGAGTAATGAGTCT
GACGAGTCTACCGATGACAGTGAAGGTGAGGAACCCATCAATCTGTTTGA
TTTCGAATTCGAGAATCTAAAAGGAAAACAAGGAACAGAGTTTCTTAGTA
GTTTTGAATTGCGCTGGGAAAAAGAAGATGTGGGAGAAGATTCAAGTGGG
GAGAGTTCAAGTGAAGACTCTGAAACGGATAGCGATAAGTCACCCAAGGC
GTCGAAAGAGGGTGAAAAAGCTGTGCCAGAAGCAAGTTCTGATGAACCCG
TTGAGAGTGAATCTCCCCAAGAAGATAATGCGGAACCAGTCAAAAAGAAA
AAGAAAAAATCGAGAAAAGATACCGAAGATGAACAAGAAGAAATATCTGA
AACAAAGTCTTCTTCGAAAAAGAAGAAGAAAGAGAAAGAATCGACATTGA
GTTCGAATGATATAGATGAAAATTTGAAACTAAACCTTGAAATTGACGAA
TCCGCCACACAAGAAATGAAATCAAAAAAGAAAAAGAAGAAAACCGAAAA
AGAAAATGAAAATGAAACCGAAGAATCGACAGCTTCTACGAAGAAAGAGA
AACGCAAAAAGAAAAAAGAAAAATCCGCATGCGAGTCACAGGTCAAACAC
CATAAACCGCAAGATTCCGAACAGTTACGACAAAAATCAGTCGAAGCTCA
TAACCAACGCACGCAACAGAATAAAGAGCTCATACAAAACGCACTTCGGG
GATTGGACACGAAGGACTCGTCATCTGCGAACAATAAAATACGATTCAGC
GACACGGACGACGATGATGACGAAGTCACCTTCCAAAACTTGACGACAAA
TGAAGCATCGAGTAAAAATGATAGTGATGACAAAGGAACGAAAACTAAAT
CTAACAAAGACGAGAAGAAGAGTGCACTTTGGGATGGTGATAGTGACGAG
TCAGATGATGGAGGGACGATGACACGAACGAAACATAAAGATGAAAAGAC
AGTCGTGAGTTTTATTTCATTTTTGTCTTTCAGTATTTTTCGGTGTATTT
TTGGAATTTCTTTTCGTGGATGTAAGGCTAATGAACGATTGATAAGTTTA
TTATCAACAGCCTAGAACTTTGGGACTATTGTTTCACTTTTTCTTGACCT
TTCACTGAATTTCAAAGTTTTTTGTCACTTTAAAAGTGGACATTTCTAGA
TCGAATCTTCAAGGAGAGATTGCCAAGTCAAAGGCGTCAGTGGTTCGAGC
CTTGCTCCTTCCCATGTTCCTTCCCATGTTCCGTTCAGCTCATAGAAGGC
CGAGCCGGCTGTGAAAACAATCGTAGGACTGTGTAAAAGACCTAGATTAC
AGGGCTATCCACGTAAAATATCGCCATTATCTAGTTCGCGGTTTGCCTTG
TCTCTCACTCTTTGATCTGAGTCATATGTACACAATTCTTAGCTCGGTGA
TTTACATCTCTGAGTCCATTCCCTATTACAGGATTTCCTTGGTGATGAAA
ACGATGAAGATGATGAAGATGAGGATGAAAACAGATTTTCAGTCAAACCA
CAATTTCAAGGAGAACACGGCAAAAAGGTTTGCATCTTGTTTCTCGTGAT
TTTTTTTGCAGCTTCAGTGCACCCGAAAGTTCGGTGAAACATTGAGTTAG
ATCTTTCATGTTCAAGCCAGATGAGAGGGTACATTTTCAAAAGCTTTCGG
AATCGAATTAGGATCATTTTTCAACTTTTAAAGTTTTTATCAATCTTATA
AACATTTTCGATTTTACGAGATTTTTTCCACTTGACCTTTTGTCCAACAT
GTCTTCCATCCCATATTGGGTTTGAATTAGTGGATATTGGTATAAAAACT
TTCCTTCATTTCCTTCATCAATTATAGCTTTTCAAAATGCAAATGCATTA
TGGTGGTGATGATCGTTTCCGGATGGACGAACGGTTTGCCGAAGATGACA
ACGGCGGCGATACTGATTCAGAAGATGAAGGCGANGACGAGTCAGATGAT
GGAGGGACGATGACACGAACGAAACATAAAGATGAAAAGACAGTCGTGAG
TTTTATTTCATTTTTGTCTTTCAGTATTTTTCGGTGTATTTTTGGAATTT
CTTTTCGTGGATGTAAGGCTAATGAACGATTGATAAGTTTATTATCAGCA
GCCTAGAACTTTGGGACTATTGTTTCACTTTTTCTTGACCTTTCACTGAA
TTTCAAAGTTTTTTGTCACTTTAAAAGTGGACATTTCTAGATCGAATCTT
CAAGGAGAGATTGCCAAGTCAAAGGCGTCAGTGGTTCGAGCCTTGCTCCT
TCCCATGTTCCTTCCCATGTTCCGTTCAGCTCATAGAAGGCCGAGCCGGC
TGTGAAAACAATCGTAGGACTGTGTAAAAGACCTAGATTACAGGGCTATC
CACGTAAAATATCGCCATTATCTAGTTCGCGGTTTGCCTTGTCTCTCACT
CTTTGATCTGAGTCATATGTACACAATTCTTAGCTCGGTGATTTACATCT
CTGAGTCCATTCCCTATTACAGGATTTCCTTGGTGATGAAAACGATGAAG
ATGATGAAGATGAGGATGAAAACAGATTTTCAGTCAAACCACAATTTCAA
GGAGAACACGGCAAAAAGGTTTGCATCTTGTTTCTCGTGATTTTTTTTGC
AGCTTCAGTGCACCCGAAAGTTCGGTGAAACATTGAGTTAGATCTTTCAT
GTTCAAGCCAGATGAGAGGGTACATTTTCAAAAGCTTTCGGAATCGAATT
AGGATCATTTTTCAACTTTTAAAGTTTTTATCAATCTTATAAACATTTTC
GATTTTACGAGATTTTTTCCACTTGACCTTTTGTCCAACATGTCTTCCAT
CCCATATTGGGTTTGAATTAGTGGATATTGGTATAAAAACTTTCCTTCAT
TTCCTTCATCAATTATAGCTTTTCAAAATGCAAATGCATTATGGTGGTGA
TGATCGTTTCCGGATGGACGAACGGTTTGCCGAAGATGACAACGGCGGCG
ATACTGATTCAGAAGATGAAGGCGAAAAATCAGAAAACAAGAAGAGAAGT
ATAGAAAGAGAAGACGAAGAAACGAAAAATTTGAATGCAGAAGAAGAGAA
GGAGCGGAATATGTCTGTACTGGAAAGCATCCTTGGCAAAAGCTTGAAAC
ACAACAAATCAAAGAAAGAATTGAAAAAAGAATTAATTGCTACATCGTGA
GTCGCTTCTCTAATTTTACCATTGGTACCATTTTTATTTCATACAAGGCT
CCGAGTTTACTGAATTATTGGGCCATTCCATTAAATTCCCATACAGGGGG
GTGGACGAACCTTTTCAAGTCAAAAAAGATTTTTTGGAAACGCGTAGATA
CCCCTTGAAAAATGGAAAGATTTGCAAAATATCCCTTAGAAAATTTATTT
TCATACCTTAAAGTGACGTTGGACGAACCAAAATTAGTCTTTTACCCCTT
GGAAATTTTAAGATAATTTTTAACCCCCCCCACAAAAAACTCTTTCATCC
CTAGAAATGTTCCTCCACCCCCTCCCTGTACGGACTTATAATGGAATGGC
CCATTCTATTTTCGTGTTTCTTTATATATTAGTTCTGACACATTGAATTA
GAGGTGTCTTCATTACTCTTCTTCTTGCAGTTATGTTTTTATTTACTTGA
ACTTAAATTTTCGATTCTTATCAAATCCTTCTTTCGAGCAAGAATGTAAG
CCTGCTTCAACTGAAGACACATGTTGCTTATCTTTAATAATTTGTTATAC
TTATAAATGGAAAATATATTATTTAACATGGTCCTTTTTTTCGGTTTTCA
GTGCCAACCCATACCAACGATATGATCCAACAAAATCAGACCATACCGAA
CTCGAAGTTGAAAAGGAAGAGAAACCTTCAAACAGCAAAAAATTAAACGA
AACATCAGTAGGAGAGAAAGATGTCGAAGAGGATGAAGCGAACCCTGTAC
CCGAAGTCTCCAAAGAACGTTTCTACAAAGTTGAAACTTCACTGAAATCA
CTCTTCTCCGGCACTGCTACTGCTGCTGAGAGCGAGGTTAGGCTTTGAAC
ATTGTAATCTAATAAATTTAATTGACTTTCGCTAATTTGAACTCAAACAT
GGAATCTTAAAAAATCGAATTACAGAAAGGTTTGATTTATGGAAAGTATT
TTAAGGTTTATTTCTTGACCCGGGGAATTAGCTTGAACTGTTGAAGTATT
CGAACAAAAGAAATTTCTTACAAAAACCAATCGAAGAAATCCGTAGCTTG
TATGATTCAAATAATTTAGTATGTATGCCAAATTTCTTCAACCTTTGCTT
TTAATTTGTTGTTGTAGCATTGGTATTTAAATCAACCCGCTGTCTATCGG
ATTTGAAACTATATCTGACTATTTTCCTTTATTAGACTCTTTCAGCCATC
TCATTTATTGGTATTTCGTCTTATCTTTATCTTATCCTTATCCTTAGGAC
AAGCCTGCACCAGCTTTTACATTTTTGTCTGCTGCGCCAACGAACGATGA
CGAGGAAGATGACTCTGGTAAAGTTGTAAATAACACCATGGATGTTGACG
ATGATGATGGAGAAGATGAAGAAACTGTTGATAAAGCCAAACCCATCAAA
GAATTAAGCTGGAAAAAAGGTATCTTTATTTAATGTGATCATTATTTTAT
GATGCATGTCACATTGAATCTTTGTATTCAAGTTGAAAGGTTGTTTTGAT
ATTTTGCGAATCTGTTCATTTTAGTCCTTGATTGGGAAATTTGCCCTATT
GGAACGATTCCTTGACTTCTTTCTCATTCATGTTAATGTTATATTAAGGT
TTACGGGAAGATCGTGACAACAGGGACGTCTCTATGGAAAACGAAAAAGA
AGAAGAGTCGGAAGAAAAAACGAAAGAAGGAGAAGGAAAAAGTTCTTCTG
CTGGTGGATTCTTCTTCTTCAAAGAAAATGATGAACGGCTGTTAAAAGGT
ATCGGTTTTGGTACTTCTCTCCTATCTTAAACAAATTGAACAGTGTCGCA
CTACCAAGGGGGCAAAAGGGGGATCTAATAATGCTTAAAATTATTGATAT
GATACCTCTTTATCACCATACTATTCTGACTAAATTTTCATTTTCTCAAA
ATATTTTATCAAATAATTTTCTCAACCGATAGGTGCAAGTTTCATGCGCT
CAGAAGGATTGGAAGAGATCACAAAACAATGGGAAGATATTCGACAAGGA
CTACGCGAGGTATGATTCAATTTCTTTGACAATCACTTTTTTACGATACT
GCAGATTTCTTTTTAAAACATCGTGACCTACTTTGAAGAAATAAATCTTT
TGCGGAAAGAGAAAAGGATACACACGTAATGACAGATCTATTTCTATCCT
AGGCACATAATATTCATTGTAATATTAGCTCAATGAAAATTGTAGTACTC
AGGAAACACATCAATCGTGGATGAATGAAATTTCAATTTACAAAGAAATG
GTCCGAAAATATTCTATTCCTTTGTTTAACTGCCTTTTCGTAATTGTTTT
AAAGTTTTAAAGGAAAGAAAACAGGAGTGGCCTCGGGGGTGTATTTCTGA
TGCTATTTTTCTTTGTATTTAAAATCTTCACTTTGAATACAATATAAGAG
TTTGATAAATAGAATGACTGTACAAAACAGAATCCAAAATTTGTTTCATC
TACAATATTAAGTTTTAATGTGCACGTTTCTGGCTATTTTTATAGCTTTC
AATAAATAAAAATACGCGTCGTCAATATTGTTAACGATCAAAACAATCTT
CAGCATTAGTGTACATTCATGAGTGTTAAATTGCCTTAATGCCTGTTAAT
TAGGTCCAGTCCAATTTTACTCAAATTATACAGATCTATTTTTGCGAACT
TTAATTTACAAAATCGCGAAATTGTCTTTTTAATTCAGATTGCTCTAATT
TTGATCTCATTATACACTTAGCGATATTGATCGAAAATGTTTTTTTTCGT
AATTTGTGAGTTCATTAAATCTACTGAAACGCTAATAAAANTCTATGGAA
AACGAAAAAGAAGAAGAGTCGGAAGAAAAAACGAAAGAAGGAGAAGGAAA
AAGTTCTTCTGCTGGTGGATTCTTCTTCTTCAAAGAAAATGATGAACGGC
TGTTAAAAGGTATCGGTTTTGGTACTTCTCTCCTATCTTAAACAAATTGA
ACAGTGTCGCACTACCAAGGGGGCAAAAGGGGGATCTAATAATGCTTAAA
ATTATTGATATGATACCTCTTTATCACCATACTATTCTGACTAAATTTTC
ATTTTCTCAAAATATTTTATCAAATAATTTTCTCAACCGATAGGTGCAAG
TTTCATGCGCTCAGAAGGATTGGAAGAGATCACAAAACAATGGGAAGATA
TTCGACAAGGACTACGCGAGGTATGATTCAATTTCTTTGACAATCACTTT
TTTACGATACTGCAGATTTCTTTTTAAAACATCGTGACCTACTTTGAAGA
AATAAATCTTTTGCGGAAAGAGAAAAGGATACACACGTAATGACAGATCT
ATTTCTATCCTAGGCACATAATATTCATTGTAATATTAGCTCAATGAAAA
TTGTAGTACTCAGGAAACACATCAATCGTCGATGAATGAAATTTCAATTT
ACAAAGAAATGGTCCGAAAATATTCTATTCCTTTGTTTAACTGCCTTTTC
GTAATTGTTTTAAAGTTTTAAAGGAAAGAAAACAGGAGTGGCCTCGGGGG
TGTATTTCTGATGCTATTTTTCTTTGTATTTAAAATCTTCACTTTGAATA
CAATATAAGAGTTTGATAAATAGAATGACTGTACAAAACAGAATCCAAAA
TTTGTTTCATCTACAATATTAAGTTTTAATGTGCACGTTTCTGGCTATTT
TTATAGCTTTCAATAAATAAAAATACGCGTCGTCAATATTGTTAACGATC
AAAACAATCTTCAGCATTAGTGTACATTCATGAGTGTTAAATTGCCTTAA
TGCCTGTTAATTAGGTCCAGTCCAATTTTACTCAAATTATACAGATCTAT
TTTTGCGAACTTTAATTTACAAAATCGCGAAATTGTCTTTTTAATTCAGA
TTGCTCTAATTTTGATCTCATTATACACTTAGCGATATTGATCGAAAATG
TTTTTTTTCGTAATTTGTGAGTTCATTAAATCTACTGAAACGCTAATAAA
ACTTGAATCAAAAATGATTAATGANCACAAAATATTTTATAATATATCGA
CTTTTTTTTCAATTTCTAGGACTTTAGAAAGAAGCACAAAGATGCTGTCC
GACGCGTCCGAAAAATGAAAGAACGGAAAAGAGTACCTAACAACAGGTAG
CCAAAATTATTATTTTTTATAAACTTAAACCATATTTTTATCCCCCAAGA
ATACTTTATAACTTTTTTTTACTTTTTTATTTTATCGGGTTGAAAAGATT
TTTGGTTTATTTTGATTCGAAAATTGAATCTAACTGTCTCAAATTATCTT
TAACTACTCTAACATTTCTTGGCATTTGCTGACAAAATCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043838XLOC_043838Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070387-exon-scaffold_55-1575043694:76844..76962TCONS_00070387-exon-scaffold_55-1575043694:76844..76962Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:76322..76386TCONS_00070387-exon-scaffold_55-1575043694:76322..76386Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:75813..75875TCONS_00070387-exon-scaffold_55-1575043694:75813..75875Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:75543..75621TCONS_00070387-exon-scaffold_55-1575043694:75543..75621Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:73109..75257TCONS_00070387-exon-scaffold_55-1575043694:73109..75257Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:72536..72631TCONS_00070387-exon-scaffold_55-1575043694:72536..72631Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:72068..72235TCONS_00070387-exon-scaffold_55-1575043694:72068..72235Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:71495..71590TCONS_00070387-exon-scaffold_55-1575043694:71495..71590Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:70917..71194TCONS_00070387-exon-scaffold_55-1575043694:70917..71194Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:70077..70311TCONS_00070387-exon-scaffold_55-1575043694:70077..70311Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:69494..69665TCONS_00070387-exon-scaffold_55-1575043694:69494..69665Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:69165..69314TCONS_00070387-exon-scaffold_55-1575043694:69165..69314Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:67743..67819TCONS_00070387-exon-scaffold_55-1575043694:67743..67819Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1575043694:66620..66893TCONS_00070387-exon-scaffold_55-1575043694:66620..66893Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:76844..76962TCONS_00070387-exon-scaffold_55-1510915933:76844..76962Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:76322..76386TCONS_00070387-exon-scaffold_55-1510915933:76322..76386Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:75813..75875TCONS_00070387-exon-scaffold_55-1510915933:75813..75875Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:75543..75621TCONS_00070387-exon-scaffold_55-1510915933:75543..75621Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:73109..75257TCONS_00070387-exon-scaffold_55-1510915933:73109..75257Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:72536..72631TCONS_00070387-exon-scaffold_55-1510915933:72536..72631Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:72068..72235TCONS_00070387-exon-scaffold_55-1510915933:72068..72235Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:71495..71590TCONS_00070387-exon-scaffold_55-1510915933:71495..71590Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:70917..71194TCONS_00070387-exon-scaffold_55-1510915933:70917..71194Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:70077..70311TCONS_00070387-exon-scaffold_55-1510915933:70077..70311Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:69494..69665TCONS_00070387-exon-scaffold_55-1510915933:69494..69665Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:69165..69314TCONS_00070387-exon-scaffold_55-1510915933:69165..69314Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:67743..67819TCONS_00070387-exon-scaffold_55-1510915933:67743..67819Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1510915933:66620..66893TCONS_00070387-exon-scaffold_55-1510915933:66620..66893Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:76844..76962TCONS_00070387-exon-scaffold_55-1491911889:76844..76962Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:76322..76386TCONS_00070387-exon-scaffold_55-1491911889:76322..76386Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:75813..75875TCONS_00070387-exon-scaffold_55-1491911889:75813..75875Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:75543..75621TCONS_00070387-exon-scaffold_55-1491911889:75543..75621Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:73109..75257TCONS_00070387-exon-scaffold_55-1491911889:73109..75257Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:72536..72631TCONS_00070387-exon-scaffold_55-1491911889:72536..72631Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:72068..72235TCONS_00070387-exon-scaffold_55-1491911889:72068..72235Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:71495..71590TCONS_00070387-exon-scaffold_55-1491911889:71495..71590Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:70917..71194TCONS_00070387-exon-scaffold_55-1491911889:70917..71194Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:70077..70311TCONS_00070387-exon-scaffold_55-1491911889:70077..70311Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:69494..69665TCONS_00070387-exon-scaffold_55-1491911889:69494..69665Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:69165..69314TCONS_00070387-exon-scaffold_55-1491911889:69165..69314Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:67743..67819TCONS_00070387-exon-scaffold_55-1491911889:67743..67819Clytia hemisphaericaexon
TCONS_00070387-exon-scaffold_55-1491911889:66620..66893TCONS_00070387-exon-scaffold_55-1491911889:66620..66893Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:66620..76962 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.8003	28.9613	9.10354	6.88704	53.3718	42.0192	37.6912	38.4693	9.40022	13.1296	6.24288	8.27445	6.64153	6.9347	6.47594	10.2769	16.2371	10.6527	1.59336	2.80348	7.34454	3.88785	21.0777	17.8716	17.1581	19.2606	5.48779	5.28334	11.6693	22.3543
Blast
[Close]
BLAST of TCONS_00070387 vs. Swiss-Prot (Human)
Match: NOL8 (Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.466e-36
Identity = 75/198 (37.88%), Postives = 118/198 (59.60%), Query Frame = 1 
Query:   70 RVFVGGLAPEVKEEELRDRFKSFGTTSDVCLFQKKTSDGVISKTFGYVNLTTTEQQLRKCFAIFGGTKWKGHSLKVQLAKDDFMKRLQKEWENPEPVKISKSRKRKQIDPIRSYEEYIAKSKSTKKAIPGIPLEGEKNWVIGKFGRPLPIVHINGKGSGRKFLKHDPSKHCHCIRRIATD----VPEDRIDGLTWELD 651
            R++VGGL+ ++ E +L+++F  FG  SDV +  +K   G   K F Y+N++  E  L+KC ++   TKWKG +L++QLAK+ F+ RL +E E       +K++K +      +  E         KA+PG  + G KNWV+ KFGR LP++H+  +   RK +K+DPSK+CH +++I  D    +P   I  LTWEL+
Sbjct:    9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQERE------AAKAKKEESTTGNANLLEKTGGVDFHMKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNQHK-RKIIKYDPSKYCHNLKKIGEDFSNTIP---ISSLTWELE 196
The following BLAST results are available for this feature:
BLAST of TCONS_00070387 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOL83.466e-3637.88Nucleolar protein 8 OS=Homo sapiens GN=NOL8 PE=1 S... [more]
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