TCONS_00070445 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070445
Unique NameTCONS_00070445
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2047

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070445 ID=TCONS_00070445|Name=TCONS_00070445|organism=Clytia hemisphaerica|type=transcript|length=2047bp
CCTTCTCGTGGCTTTGTCATCCACCGCTGTACCACGTGTTACTGGCACTG
CCCAACGAATAGAACTGGATTGTACCAAGATTTATGAAGCTCAACGAATT
GGTGTGCTAGAAGAAGATTGGAATCGCTCACCTGACctaataaatataat
aaacCAGCAGTTCGTGACGTTTGAACCTTTTGGTTGCAAGGGCAGGATCG
TATCCGTCAAACCACCAAATTCGTCACTCAAACTCATAGGCAGTGAAGGC
ACAATTAAGggAACTTACAATTTTAAAGATGGAAAACTTTCTGTGGGTGA
CGTACTTATCTTCGATGTTGGAGATAACCTAGCACCTGTGAATAACGGAA
TAGAAACGATTGTTACACCAGGACAAGGATTGAAACCAATGCCTGATGCT
AATGTTGGTGTTATTCCACTACCACCACTATTCAGCAATCGTTCTGTTAA
GATAGAGCTAATGGTGCAAGtcgGTTACAATTGTACAGCATGGACAAATG
ATACCTTCTGCTACCCACCCCAAATTGGCAGTAATGTTGGAGTCACAATT
TCTAACAGAACTTGCACAAGGGTGGTCGACACCTTCAACAACACAGTGCA
AGTGCAGACAACGCCCTGCAACGCCAGTTTTGAATGGAAGTCATGGTCTG
ATTGGTCGAAATGTGAGCCAATCAACGCCACCGAATCATTATACGGCAAT
GGAACGAAATACCGAGAAAATGAAGATTGTGAAGATGGAAACGGTGAAAG
AGTTGACGATTACTGGTGTGGTGGATCTGAAACCATTTATCATTTAAGAT
CTTGTTATGTTTTTAACGAGAGTGAATACAAGTACAGTGATTACACGTGG
TCGGAAATGTCAGAATGtcaaatttacagaccagaattacAAGGAGTTAC
AGAAACCAATGAACAGTGTGGAAATGGATTTCAATATTCCAATCAAACAT
ATTGTACTATGGGTGAATACCAGGAGTATCCACCACAGAACCAAAGTCTT
TGTCCACCCTCCGGCTATTTTATGAAGTTTTGTTACAAGCCTTGTAAAGA
AATGAGATCATTCTACTCAAAAGCAATCTCTAATGATCAATTCGAGATTT
ACAAACCAAACACTGTAGAAGATTGGGAAGTGAGGAATTTCACTgagaag
ttttttaaagaagaagaaaaatcatcTCTTTGGGTTTTGATGAAGTTTCA
CCCGTATGACCCTGAAAATCTAAGGTTTTCAGGAAAAGAGTTGAAAGCAT
CCGGTATCGTGTCAAAGGAAATCGAATTACAGatTTTCTTCAGCCGATTT
ATACATCTCCGTTCTTTCCAAATcgaattttctgaaatcgaaaaattaac
gtACATTGATGCTACAACTTACGTAAGCACAGATTTAGTGACGTGGCGTA
ACATCACGCAGAAAGAGagAAAAGTAATAGCTCACCGGATTGAAAGCTTA
CGGATGATGAATGCTGTTCTGGAAGTTCATCAAACTATTATTGGTCTAAA
GATGACCTTGGAATCGAATGCTACTACGCCGAGATTGAAAGCAACCTTGA
ATGAATTGTCTTATAATGAATTAGGGGATTGGACCGAATGGGGGAGTTGG
GGTGATTGTAGCGGAAATTGTCGTTTAAAGAATTCAACTTATGAGAGAAC
AAGAACTTGTAGTCAACGTGACCACCCGAAATATTGTGTGggaaaatttg
ttgaaaaagataCGTGTAAGTGCAAAGAGGACTTTCAATGGAAGCATGTC
AACACGACATTCGGTCCCTGCAACGCCACAAAAGACGAATGTGGGCCTGG
ATGGCGGTACAAAACACCCAATGTTTGTCAATACATCATAGATGGAAGCT
CACATCCTGAAGAACTTTGTGGTGATAAACCAGTCATTGCTCAAAACTGC
TTCGAAGTTTGTTCGGGTCATTGTAACCAGGCTATGGCGATGGGCATGAA
ATCTCCAATAAATTATGCAAACTCAAACTCTGTGACTCAACAGTTGGAAA
ACTACAAAGAGGATATCTTCGTGTCAATGTCTGATATTTGCCTTGCG
Run BLAST on NCBI

transcript from alignment at scaffold_56:329582..345096+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070445 ID=TCONS_00070445|Name=TCONS_00070445|organism=Clytia hemisphaerica|type=transcript|length=15515bp|location=Sequence derived from alignment at scaffold_56:329582..345096+ (Clytia hemisphaerica)
CCTTCTCGTGGCTTTGTCATCCACCGCTGTACCACGTGTTACTGGCACTG
CCCAACGAATAGAACGTAGGTGCTATTGACTGAGTTACAGTTGTTTTAAG
ACTCAAGTGTCGGTGTTTGCAAGTTCTTACATACCTCATTAGGAAAGAGA
CCGGGAAAGGTGGCCTAGATTTTAAAGgagtgaaaaaattttttcccagt
CCAcaatagttttgacagaaatttTCGGACTAAAAGGTTTCCGGAACTCT
CGTTGCTACCATTGGAaagaacataaaattttaaagaaaacagGTTGGTT
TTGGGGTGCCCCTTACCCCTGCGAAATTTTCAAGCTCTGAGATTGAAAGG
GTCAAGCTCATTTTACTTTATACGAATGATCGACTTAAAATTCTGtaatg
ttttaaatgttttaaattttcttcttaCTGAAGTGGATTGTACCAAGATT
TATGAAGCTCAACGAATTGGTGTGCTAGAAGAAGATTGGAATCGCTCACC
TGACctaataaatataataaacCAGCAGTTCGTGACGTTTGAACCTTTTG
GTAAGCCATATAAAGTTTCTAATTTGTCTTCAATTTGTGTGTAAAAGTAT
ATTTTCAACGGTTATTGTGTGCATAAGGGGTGAAGTGAAATTGGCAGCAT
AAATCTCTATATTGCTTACTTCCAGAGAAAATTTCCTATGCATATTTCTC
TGCCGATTAGAAACGAAGACATGAAACAGTttacatccctgtgtcacaga
cccattgGGACTCCATCCCTACTGGAAAAATGTCTGAAAATTGCACTCCC
AAACAATttccactggatttttttaactttggagcAATAAAACTTCTATC
CCccttgggatttcgatagggatttttatccctactgaaaaaaaaagttc
catcggggctgtgagacaggggtgtcagtATGCTTAAGTCGTTTATACAT
CGTTTCTTCTCATACATCTTTCGAAACTTAAATTCTAGGTTTAAAAACTG
GTAGTGAAAAGAACTCTGGAATTTCCCTGATTTTCGTTGAAAGGGGCACT
TCTTACACATAAAAAATGGTTATGTAAAACTGACGAGTCTTGATTGAGCT
CTTTTAAGGAAAAATTGATCGAGATTGTCGAACAATTTATTCAGCTTTGG
GAAACAATCGATCGTCAAATGAATGTTAATATCTTTCATATTTAGGTTGC
AAGGGCAGGATCGTATCCGTCAAACCACCAAATTCGTCACTCAAACTCAT
AGGCAGTGAAGGCACAATTAAGGTAAACTAAATTTTATTACGATGTTAAA
gcaaatatatatataataaaccagctgcgctggaagctccggctttagag
attaaaagatgtgaaagatgagcttgttgagttagttgtgttcgaacgtt
gcccacaaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNgtcaatatttccaagttcttataaatttattta
tttctaaacttgccaatagcgaagcaatgatgcgccgttgatttgattgt
ccggataaaatttcgttaataggataaactttcgcgatgATTTAATTTCA
CGATTGGGCCtacccgcgaaatttaaaaattttgcagggacttaatttcg
cgggtggcaatattttcacgattttgtgacttaacTGTCAAATCGTGcat
tttggttgttgaaatacacattattagcacttctttgaagccagtaaaca
ttcaaaaagtatttgtttgacaaattttgagttttgtttagaaatatttc
gcggatgacacccaaatccgcgaaatcagcaaaatttaatccccgcaaaa
gtttatcccattaagccACAggtttttagctaagcattattttttctgct
gggataatacttggagaagagtaggataaaccaaataaaatggttcaata
gtgtgtatgtaataaatagtgttatatttggaaaaaacacGTTTCAcgtt
tgaaaaatgttcaaaaggaacggtcgccccagccaatgaaattacgacaa
agtccaaaaaatatcattttcagttataacactgtgaaaatttctccgat
cttgttcaaatttacacaggaattgtgttttagtatcctttactgaattc
tcatagtgatatgtttgtgaaaaaatctgtgtcgggtttgaaaaatcaaa
aggaacgggcGCCAGCCGATGATGAATACGAcaataacaaagtccaaaac
aggatcattttcagccatacataacaccacaaaaaatactgtgtatcaat
ggctgtgtgtttgaaagtttgattgtcaagtttgaaaatccaaaagggaC
AACCACCAATtatatcatcatgaaaaatgaccaaaagtccaaaataatca
tttttacagcataaaatcatgaaaaacacACGTATCTGAATTCAGTATAC
AGTAGCAGTACAACGTACAACGCACCATCAAACTTCTCATAAatcatgtc
caaaacatcatgaataaggatgaaaatgatcaatttttcactgagatttg
ccagtattCACAGCTCACCAGTCCACGACCTTTCGatagccatctttttc
taaatacttttcggccaatcaaatcacagtattatcggaatcagtgatcc
gtttttgttaaatcggaatagatcatcggattagataaacagacaaaaaa
tgtcttgacgattgtcggaagagagaattaaaggctcctaggccggagca
aaaagcagattaaaaatatcaatttcagCNgaaaacccccccccccccct
agttctgaaccgcccctaaaagcctagtatgaatagggttaaacccAGTA
GATGATAACGTTTGAGTTTATGATAGATAATGCCGTCGAACGTCGGTTTT
GCGGTTTTAATTTCTAATAAACACCGGCTAATCAACCCTCCGAGCTTTTC
ATCTTCTTGAATTATTTGATATTcatttaataatttatttttttagggAA
CTTACAATTTTAAAGATGGAAAACTTTCTGTGGGTGACGTACTTATCTTC
GATGTTGGAGATAACCTAGCACCTGTGAATAACGGAATAGAAACGATTGT
TACACCAGGACAAGGATTGAAACCAATGCCTGATGCTAATGTTGGTGTTA
TTCCACTACCACCACTATTCAGCAATCGTTCTGTTAAGATAGAGCTAATG
GTGCAAGtcggtatgtttttattttcaaatttttataggATTTTTATTAC
TCAAATCTTTCAATTGCCATTGCCATAaaagatttataaaaatttgtctC
AAAAAATCAGCGGAGGCAAGAaaggggacaagctggagtttttacaaact
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGATTG
ACTATAAATGAATTctaattaaaaatatttaaactaCAGGTTACAATTGT
ACAGCATGGACAAATGATACCTTCTGCTACCCACCCCAAATTGGCAGTAA
TGTTGGAGTCACAATTTCTAACAGAACTTGCACAAGGGTGGTCGACACCT
TCAACAACACAGTGCAAGTGCAGACAACGCCCTGCAACGCCAGTTTTGGT
AGGCTATGAATAGTTTTATACGAACACACCTTTCTCATTATATATGTTTA
GATTTACCATTTACTTGGAGTATACCTTTTGTGATCTAACGTAAGTAAGC
TCCTATTTGGGGAAATGactatacaccttttcaaccgtagctgccaattg
ccaattatgttttttgtttcaataaaaagagGCTTAAGGTGAGGTCACGG
GGTTATTTTTGTGCGATTTTCAGCAAACACTCATAAAGATTAATTTTTCA
GGCATCAACAACACATCCCGTGGGTAGGCAAAGATAGTAATTCCCGGGCt
tctattttttcaataccttaAACAAATCTTGCGAGAAGGAATTTTCGCGT
AACAAATTCTTGCGAAGCacaaatattttcagaatttcagaatttaaaat
attgtgaacaaaaaattctcccaaccgcaaaattaaattccgcgaaactt
tcgaattttgagctttgaaccgcgaaattaaattgaGCGAAAATGTCTTC
CAGCGAAGATTTCTTCCCTAAATGTAATATTTGATTCCATATTTTCAATG
TAGAATGGAAGTCATGGTCTGATTGGTCGAAATGTGAGCCAATCAACGCC
ACCGAATCATTATACGGCAATGGAACGAAATACCGAGAAAATGAAGATTG
TGAAGATGGAAACGGTGAAAGAGTTGACGATTACTGGTGTGGTGGATCTG
AAACCATTTATCATTTAAGATCTTGTTATGTTTTTAACGAGAGTAAGTCC
GACTATTCATAGACTattcatctaaaaagaacggcaaataactattaaaa
agcgacaaaaagaacgacaaaccctaactatcaaagaatgTCATATTTGG
CCGTCCCAAACCCCGACCTTGGTCAGTGACTACCACCCCTACATATTCAT
TACTTATTGTATATAACGCTATTTAACGACTAGCGGTTTAAAGAAtgata
aattacgcatgcgtataagTCTTATTTGGGTGAcctggaaacattagatg
aactaacTATTATGAGGTACAGAAAGTGTTCCCGATTTGGTCAGactatt
ttaaaaaatatacctTGCTTGgagaaattgcaaaaatgaaatcttttggt
gCATCGGGAAATTTATTTGACGAGATAAGACTTTTTTGTAGCATTATTAT
TTTAGAAGTATTTGAATGCACCTACTATCAATATTCTCTACAAGGACTTC
AGTTTGAGGAAGTATGAAATGATGACTGATTAACTGtgcaatgaaaatat
gaaactCTCTATAGCCTGATGTTTGTTCGATATTCGAATGTTATTGGTAA
AAAATCTGttgttttactttttgttttgttttgattttttgattgcTGAT
TGTTTGACGGACTTTTGTTTAGGTTTTTGTGAGCTGTGATTGGCTAGAAA
ACTAATCAACATGACGTGTTAAATGATGATTAGTCGACTCATTCGAACGG
GTCATACATGGCGTGAATAATCTTTAGAATTTTCTTTGTGATTGAGATGA
GATGAGGTAAAAGTTTGGGAAGACTTTAGAAGAATTTCTGCAAAGGTTTG
GTCATGTTGGGTTTGGTTATCTTGTGTAAAATCAAGGAGACGAGTTTTTA
CATGCtctttttttattacttcaaatgaccattattattaaagtatctta
aaaactccatctcatggaaaataagaaaatgtagTAGGTTGGTAgatact
ttttttttctttacctcGCATCATTATAGTTCGAGTTGGAAATTTCATGC
TAAAGTCGGGAAAATAGCGCATTTAAAACATAAATTCCCTATTTGAGATG
AAAATTAAATGTGTTCTTCCAACAGAATTCTGTgaggttttttttgaaaa
aatctttcctaaagagacataaaagtagtaaaatgtaaacattgcgcgaa
ccacgtgtcattaaagagaacaattaaaatttgttttgattttgcatgcc
cgctgcatacggtttgtttacaaatttcgtcagtacttttatgtcccttt
aacaaAAGTCCTTTCGTTTATGTCATACCAGGTGAATACAAGTACAGTGA
TTACACGTGGTCGGAAATGTCAGAATGtcaaatttacagaccagaattac
AAGGAGTTACAGAAACCAATGAACAGTGTGGAAATGGATTTCAATATTCC
AATCAAACATATTGTACTATGGGTGAATACCAGGAGTATCCACCACAGAA
CCAAAGTCTTTGTCCACCCTCCGGCTATTTTATGAAGTTTTGTTACAAGC
CTTGTAAAGGTATGGTATTATTCTATTCATGTTGTTTTCCCATGTTTGAT
TTTCCTAGTCCTGAGGGGAAAGTCTTAGTGGGTTTTAGATTTCTATATTC
ACTTTTTAACTTCGCAGTCGGATTAttagttgggtgtttaagataaaaac
ggcaattattGCATTCGACACCCTCGCAAATAGTAGACCCACTTTGTCTC
GCctacttttgttttcaattgGTTTCTGTCAGAATGCAgaatagcaaaat
cgagtcatatgtaaacaaacttacaaCGGGGGTTCTGTTTTCTCCTTCta
gctgtgtttcggcatcgatgcgGGATCTTTTTACATATCatttcagaact
tttcaagtttttgagcaatgaaaaatttaaaaaatcacttttaaagatCC
GAAAAACCTTTCCCTCAAtatgattttacatttttcaaagacctctgaca
tctttgcccttttATTTCTGCTGAATAgacatttcatcgttaaaaaaatt
gccgttttcggcaatgagtgaatgagtagcttagattgggtaatttATTC
TAGGCCATAAATTACTGGGAGATGAGAGACGCTCCACTTCAGCATTTGAC
CTCACAGGTCTAGCGCAAAACAGCAACGGGGTTGGGATAATCCTGCCTCA
CGTTCTGCTCCACCGGCAgacaccagatgaatatacttactaaCTTACTA
ATTTCGCGTTTATCTTCTCACCAAAGAAGTGACAATATTTTTTGCTAGGC
AAATCAAATTTCTTGAAGATTGTTCGGCCATTGCCATCATGATTCCGGCC
AAAGCTTTGACTGTCTTGGTTGAAACTAACTTTGTCACGTGTTGCGTATT
TAGaaatgaaataatttcaaaccatagatttataaagcccgaagggctag
atggcgtacttttgctgaaaagtgtgccgtggttaggtaggaaatcctac
ctaggtcacgtggcattacaatagaatttcatagactatgctataatcta
agacgaattcgaaaaataaagaataacttCAAACACGCAAATTAGCATTC
GGGCGGAAATTTTGTTTGCGTGGGCGAAAAATAGTCGGAGGGGCTCAATG
TCGTAAACAGAGACTCTATTTTCCGCCgcgcaacatattacgttttataa
tatacaaccATTTTCGGAACGTAATATACTAGAGAAACTAAATACAAGTc
ggtattgaaaaatataaaatatactatATACCGGAGCCTGTCCCGGCATG
GATCTTTtggatttaaataaaattctactAGAATTATGGAttatgaaaga
aagaaagaaaaaatttaaatttcatcTTGAGGGAGTCGTACTCTACCTCT
CGATCCACGGATGCATCTCACTGTAGATCTAACTAGCGAGAAGCATATGA
TAGTTCTAATGCTGTTAGTAACTTTTGAGAAAGTTCTTTTGTCTGCTATC
ATTTCAGCTAGACGCTTGTAATATATAACGTACATTCACGTCCAATCGCC
CCATTTGCCGCAAAAACAAGCGGAGAAAAATATCCATTTTCGGCTTGCAA
AATGCGTTCACCATATTGTCTCTTATTTTCGCTTTCATTGGATGATAAGC
AGttctcaatttttgaattgCTGTACCTTCGAGCGAACGGGTTGAAAACC
ctcacatcaaaaaatgctcTTTGGCCAGCAGTCCAAAACCGGGGGGGCTT
ATATCCAGTCTCGCCTCGCGTGAGACATTTGCATGTCTTGGTAGATCTTC
GTTATTAAGTTCGTTTAATAAGGGTTCAGTTCTTACATCTACGCATACTT
CTCCTAGCAGTTTAGACGTAATGTCTCTAATATACAACTATGTTTTATCG
TAATATCATAATATCACTAATATAACGTAATATCACTTATTTTTGCCTGT
GATGGCTTAGAGCACGACATCTGGCCCTTTCGGGCTTTACCCTAAAATTA
GCtttgatcaaaatgtttcgtTTTTAGAAATGAGATCATTCTACTCAAAA
GCAATCTCTAATGATCAATTCGAGATTTACAAACCAAACACTGTAGAAGA
TTGGGAAGTGAGGAATTTCACTgagaagttttttaaagaagaagaaaaat
catcTCTTTGGGTTTTGATGAAGTTTCACCCGTATGACCCTGAAAATCTA
AGGTTTTCAGGAAAAGAGTTGAAAGCATCCGGTATCGTGTCAAAGGAAAT
CGAATTACAGGTACTTGTTCTTTGAGAAATTTTATATTACTTTTCCGTTA
AATTCATATTTGTTAATACTTCAATGGGAtgaactttcgcggggattaaa
tttcgcggatggcctatctgcgaaattcaaaaatttcgcgggtacttaat
ttcgcggatgaggcttATCCAAATTTCCATTTGGAACTTGATTTCGCGga
ttcgcaaaatttaatccccgcgaaagtttgtacCATTAAAGTATTAAGTT
AGTTTAGTTTTGAACTGATGATAGACATttcttttaacttttagatTTTC
TTCAGCCGATTTATACATCTCCGTTCTTTCCAAATcgaattttctgaaat
cgaaaaattaacgtACATTGATGCTACAACTTACGTAAGCACAGATTTAG
TGACGTGGCGTAACATCACGCAGAAAGAGGTAAGGCCATAGTAAAAAGTC
CGTAAAAATAACCTGAACTTTTATACAGTTGaatctcgctaattcgaact
cgaatggGGAATGTTAATTATTCAAAAtacagagagagagagagagagag
agagagagagagagagagagagaatgTAATTCAAGAAGGTTTTTGAACAG
AACTTTTGAACAGAATCTCAGTCCGAGTCTGTCCAAGTTCAGCTCTAGCT
CCAAATGACCAATATTTCGTTCTTATTTGATCTTGGCTTTAATCGTAATT
ATAGGTATTTAGAGACGGAAAAGGACTCATCAATAACCCTACTGCTAAAG
TTCATTTGCATTACGATCAAATTTAGCGTCTGAAGCAATGATTTTAAGTT
AGCCGGTCAAAATATCCTATTAGGTTTGCTCTCCTAtttcgggacaagct
ggagtttttacaagctcttatttgatttggttggtcgttaactagTAATA
AAAccattttgttactttttctaaagaacgtgtcatctctatcacttcaa
atgaccaattattgaagtatcttgtaaaaactccagctcatccccctATT
TCGAGTACTGAATCTCAAATCAAATCATAAATAAATGAAACGTGGAACCG
CCCATTTTATAGTCGCATCGTCGTTCCCTATGtattaatttttgaattat
tcgaatgatttatcaaaaaataatttcttttttagagAAAAGTAATAGCT
CACCGGATTGAAAGCTTACGGATGATGAATGCTGTTCTGGAAGTTCATCA
AACTATTATTGGTCTAAAGATGACCTTGGAATCGAATGCTACTACGCCGA
GATTGAAAGCAACCTTGAATGAATTGTCTTATAATGGTATGTACACTCTG
TTTGCCGAATGACGGAATTAAGTGCCATCCATCACTCTGCagcttcaaat
tttttattttattttaaatggacCAGGACCTACTCTAAAGTGTTGAAATT
GTTGAATTATAACGTTCTTTTGCAAATTATAGTACTCAAAAGAGAATACA
CATAGCTTTGAATTATATTTCGATTTTGTGCCTGTTTAAAAGATAATGAT
TGGAATAACTTTTTGTGGCGATATCCCACTCACTTACGGAGCACAAGGCT
CAATATATATTAAGACTATCAAAAGTAAatcactttttgaaattttactg
agCTCATGCGAAAAGTACTTTAAATTCAACCAAAGGTTGAGGTTATTTAG
ATGGGTCCTGAGTATGTGGTGGTGGTGTTATCTGACATCGAGACAACGGG
TGTAGGTAAACTCTCAAGTTAAAATGTAGTGACATAGTCAGTTGAATAAA
TTGGCCGAAACAGGTTTACGTACGCTTACAAACCACTATACCACTTTTTC
ACAACTATAAAGTAATATGGAAACTCTATTGTTTCTTTTTCTAGAATTAG
GGGATTGGACCGAATGGGGGAGTTGGGGTGATTGTAGCGGAAATTGTCGT
TTAAAGAATTCAACTTATGAGAGAACAAGAACTTGTAGTCAACGTGACCA
CCCGAAATATTGTGTGggaaaatttgttgaaaaagataCGTGTAAGTGCA
AAGGTAAGAGACTTTGGTTGAATGCTTTCACAAATTCTAACTTCGAGTCC
CTTTTTGGCTGTAATTATGCTGTCGTTTCTTAAGGGTAATTTTTTGGTCA
TAAACTTATGGTTAAAtatagacaggagacccgtcctgtatttttataat
ctgatgtatacaggacgggtatgacctcaaaaaaaatcaaatttacagtg
tgaaattcgaatttagcgctgtcctcgcaatttgattggctatgttttca
accgttattaggatctggtaaattcaaactctcagcccataccctgctat
atatttcgccatcagtatatagaataagaaatcatagcatggatctccag
gctaggtTAAATAATGCTGCAACAACTTCTAACTTCGCTTTTCAGCTGTT
CTCGTGCTGTGATTTCTTGAGGGAGAAAATTTGAGCATCTATTAACTTTC
CACGCCTTTTATTAAAAGCATGTGTTTCCTTTTACCACAGAGGACTTTCA
ATGGAAGCATGTCAACACGACATTCGGTCCCTGCAACGCCACAAAAGACG
AATGTGGGCCTGGATGGCGGTACAAAACACCCAATGTTTGTCAATACATC
ATAGATGGAAGCTCACATCCTGAAGAACTTTGTGGTGATAAACCAGTCAT
TGCTCAAAACTGCTTCGAAGTTTGTTCGGGTAATTAACGTTTGACGGTCT
AACGTAGCGGGAGAGTGTATTTCTTTAACAAAACTCTTTTGAATAGTact
aaagcttttttcacatgtacgtaaaatcttacttaagaccttacgggaaa
tcgttcgtaaggctgtcttttggcAAATTCGCCGCCATTACGTACAGTTT
TAATTggttaaaactttttgaacgtaagcaaactctactTAAAAGGCgtt
aaaacactacgtaagcttagaGAATTTCCCATTCTCTAAGGGCTCACGTA
AAACTTTACGTgcacgtgcatgtgaaaaaaggttttaaaaaacCTGTCTT
ACGTCCGTAACGTCCAGATGACGTCAGATGAACGTTGAGAAAACCTTCCT
TGTGCAGGGACACTACACATTGTTCTACCGTTAATCAGAATGACTTTCAT
TATAAAGTTGTAGCGGATGTAACAGACTAGTAATTTCTTCATCAAAATAT
TATATTCTATAGACTTAATTAGAGCCTTAATTAGAGGGTGACATTTGGAA
TTTTATGGGGCCATTCTTTTATTATGATTCTATAGGGTCTAAAGCGCCTC
TGGTCCAAAGTTGGGAGCTGTGTTCCaattttacacgtttttttacacCA
ACCGGGCCTACTATTCCTCCCAATAATATTAGATACGAGAATTCTGAAAA
CTCCTTTTTCTGGGAATACATTTCATCAAAGACTGGTCTCTCATGAGATC
GCCAAGCGGTGCCCTGGAACTGACAGAGTTAATGAAACCTCAATACTAAT
AGAACTGATAATAATAGAATTCtgtcaaaactttcaactatttttctttt
tcacggGTTTGTTAAAATCTGGTTAAAATTGCCTCTACGGCAATAAATAG
ATATCGGACTGAGCTTAGTAGCTCCTTTTCCATTAAGACGAATTTGTTAG
TTTATGTATTATTTAAATATAATGAATATATTGTATTTTCCAATCAATTT
AAACTGTGCTTGCCTTATTTTaggggacgagatggagtttttacacgctc
ttatttgatttggttggtcgttaaccagtaataaaacaattttattactt
tttctaaaaaacgcgtcatttttattacttaaaatgaccaattattaaag
tatcttataaaaactccatctcatctgtatTTTAGGTCATTGTAACCAGG
CTATGGCGATGGGCATGAAATCTCCAATAAATTATGCAAACTCAAACTCT
GTGACTCAACAGGTGAGTTCCATAATTCAAATACACATAACAGTTTTaag
actgcctgaaacggcacgaaactccgagtatcggaaaataaatttgtctc
tATTCTTGACTGATATATCGCTCTACCGATGGTACAGAGCACTTTCTTGA
ATCACAAGTCAGATTTGCAAATAAGAACTGTTTTATATAGACCATAAAGC
TCAAAAGTGCCAAAGcataagaacaacttaagaacaaTGGTTAGCCTGGA
ATGACTCGAGTCAAATCTCAGTGAGAATAGGGTATCAGGCCTAAAATACG
TCAGCTTTGCCTTAGAAATAAGAATAGGGTAAGAGCAGTTTTAAGATCGA
AGTGCCAAAAATAAGAATAGCTTAACCTCATAAAAAATATCATTGGTTCT
TATAAGAAAGAGTGTACATGATAATTTATAATTATATGCATGATTACGAT
AAGGGGAAATTTTTCCACCGATGGTGGCTGGCGTATTAATTGAAAttccc
ttaaccctattagccccagagggggggggggggggaaNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgccccgggg
gggggggggggtagaatctaccacgctggagttcttttgtgtatatatcg
gagaagaaattttcaaacgacttgaaactttctgacttttaacaaaatct
tattaagagtacttgtacaaAATTTTAGGGTGATAGGTCATCCAGATCCA
AATCttcatggaaaatgcaaaaccagcaattatgttaaagggcagccttt
tatctttcagaatctttaaatagaatctaaatatctttattggttcgact
gtaatagacatttttgtaaaccatctacacccctgtgtcagtgacccggt
cagatCCACCCCGGTGGATAACCCGgtggaaaaaatggccaaaaatggcc
taatttcaaGCCCCGGTGGGAAAATGAGTCACCCCGGTCAAAATTAGTTG
AAATTTTCAAACCCGGtcgaaatttagaaaatcatgGTCTAAACCCAGTC
AAATCTCGCACTATTCAGGTCACCCCGGTCAAAAAACCCGAAAAAAATCC
AGCTACTTTCAGTGAAAAATAGCTGTAAAGTTTTCTGACTCAGTGGCGTA
TATACCCCACTAAAAGATAGAAAATGACTATAAggtcaaatttttccaaa
tttaaagtgtctgtagtttttgtgaccttattctgaCTAACTAACTAACC
ACTTAAGGTCTTTTTAAGCTGTTGACCTTTCTTAGACACAGAATTTTAGC
CTGCGGCGCCAAAATTACAAATAAGATTTTCTTcaagatgaaatttaaag
ttatCTGCAGTTTATTTGACTCTATTCTTGCCAGCTTTAACCTTTTAAAA
GGCCTCTTTTAAGGTGTTAGAGATTGCTTACAGCGAAAATTTACGCATGC
AGCGCTAAAGCTAGAGTGAAgattttctcggaaaatttccattaaaataa
agttcaaaatttttcccatcTTGCCTTCCGGAACAAAAACTTGTGGTTAC
GCCTCTGTAGCTGAAAGTATGACAACCCTAAAATTGATAGAATGAAGAAG
AAAGCTAAAAACGCCGAGATACACCAGGGGCTCCAGTTTTACAGTTAGCA
CTCAGGGAAGATCAAAGCATACCCGCTAATGCTTGAAAGTCCAAATTTTG
TCCTTACCCCGGTGAAAAttgaggtaaaattttccacccggcgacttttt
tgaattttacaattgggcccggtgaaattttgttttgttcagaGTCACCC
CGGTGGATTTTTAAActccaccgggtcactgagacaggggtgtccaTCTA
TTtaggcttttttccgacagatggaaattttgtgatggcGTCACTGgttg
acgtcatcatttttcttcctggaaatttgTATCATGATAGAGAACATCTG
TACTAAATTTCATGGTCATAGCGCTATCCTAGATAAAAAATAaacgaggg
tggtagattctaccccccccctggggatgcaaaaatcaaaaaagctttgg
gctaatagggttaaaatttCACACAATTTCATAAGGTTTTCAATACTATT
CACCAGACGGTCGTAATCGATTTAAATCGATAGATTACGACTGTCTGGTA
TTCATTGAATTTAGAGACCTACCAACTTTTTATAACTGATGTACTGATAT
CaaccaactttttttaaacaaatttactGATATCTCCTAAACATCTGTAT
GTTTTTTTTAGTTGGAAAACTACAAAGAGGATATCTTCGTGTCAATGTCT
GATATTTGCCTTGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043871XLOC_043871Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070445-exon-scaffold_56-1491911889:329582..329646TCONS_00070445-exon-scaffold_56-1491911889:329582..329646Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:329582..329646TCONS_00070445-exon-scaffold_56-1510915933:329582..329646Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:329582..329646TCONS_00070445-exon-scaffold_56-1575043694:329582..329646Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:330015..330131TCONS_00070445-exon-scaffold_56-1491911889:330015..330131Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:330015..330131TCONS_00070445-exon-scaffold_56-1510915933:330015..330131Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:330015..330131TCONS_00070445-exon-scaffold_56-1575043694:330015..330131Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:330777..330853TCONS_00070445-exon-scaffold_56-1491911889:330777..330853Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:330777..330853TCONS_00070445-exon-scaffold_56-1510915933:330777..330853Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:330777..330853TCONS_00070445-exon-scaffold_56-1575043694:330777..330853Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:333378..333591TCONS_00070445-exon-scaffold_56-1491911889:333378..333591Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:333378..333591TCONS_00070445-exon-scaffold_56-1510915933:333378..333591Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:333378..333591TCONS_00070445-exon-scaffold_56-1575043694:333378..333591Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:334221..334379TCONS_00070445-exon-scaffold_56-1491911889:334221..334379Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:334221..334379TCONS_00070445-exon-scaffold_56-1510915933:334221..334379Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:334221..334379TCONS_00070445-exon-scaffold_56-1575043694:334221..334379Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:334935..335123TCONS_00070445-exon-scaffold_56-1491911889:334935..335123Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:334935..335123TCONS_00070445-exon-scaffold_56-1510915933:334935..335123Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:334935..335123TCONS_00070445-exon-scaffold_56-1575043694:334935..335123Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:336413..336640TCONS_00070445-exon-scaffold_56-1491911889:336413..336640Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:336413..336640TCONS_00070445-exon-scaffold_56-1510915933:336413..336640Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:336413..336640TCONS_00070445-exon-scaffold_56-1575043694:336413..336640Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:338609..338841TCONS_00070445-exon-scaffold_56-1491911889:338609..338841Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:338609..338841TCONS_00070445-exon-scaffold_56-1510915933:338609..338841Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:338609..338841TCONS_00070445-exon-scaffold_56-1575043694:338609..338841Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:339126..339260TCONS_00070445-exon-scaffold_56-1491911889:339126..339260Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:339126..339260TCONS_00070445-exon-scaffold_56-1510915933:339126..339260Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:339126..339260TCONS_00070445-exon-scaffold_56-1575043694:339126..339260Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:339967..340117TCONS_00070445-exon-scaffold_56-1491911889:339967..340117Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:339967..340117TCONS_00070445-exon-scaffold_56-1510915933:339967..340117Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:339967..340117TCONS_00070445-exon-scaffold_56-1575043694:339967..340117Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:340676..340834TCONS_00070445-exon-scaffold_56-1491911889:340676..340834Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:340676..340834TCONS_00070445-exon-scaffold_56-1510915933:340676..340834Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:340676..340834TCONS_00070445-exon-scaffold_56-1575043694:340676..340834Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:341322..341510TCONS_00070445-exon-scaffold_56-1491911889:341322..341510Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:341322..341510TCONS_00070445-exon-scaffold_56-1510915933:341322..341510Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:341322..341510TCONS_00070445-exon-scaffold_56-1575043694:341322..341510Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:342667..342743TCONS_00070445-exon-scaffold_56-1491911889:342667..342743Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:342667..342743TCONS_00070445-exon-scaffold_56-1510915933:342667..342743Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:342667..342743TCONS_00070445-exon-scaffold_56-1575043694:342667..342743Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1491911889:345043..345096TCONS_00070445-exon-scaffold_56-1491911889:345043..345096Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1510915933:345043..345096TCONS_00070445-exon-scaffold_56-1510915933:345043..345096Clytia hemisphaericaexon
TCONS_00070445-exon-scaffold_56-1575043694:345043..345096TCONS_00070445-exon-scaffold_56-1575043694:345043..345096Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:329582..345096 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.34305	0.94453	0.375625	0.485574	1.49991	1.41311	3.88563	3.58022	5.001	4.26695	8.03632	7.87014	8.42658	8.14175	4.29993	5.00179	7.32202	7.73186	15.4788	12.9897	12.026	11.5961	2.97252	5.41699	13.8262	14.5703	4.8713	4.45014	1.41603	1.45677
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070445 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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