TCONS_00070495 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00070495
Unique Name	TCONS_00070495
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1791

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_56:7970..12698-
coding sequence from alignment at scaffold_56:7970..12698-

transcript sequence

>TCONS_00070495 ID=TCONS_00070495|Name=TCONS_00070495|organism=Clytia hemisphaerica|type=transcript|length=1791bp
CTGACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGTGTCA
AATAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTTTAAG
TTGTATAGTTTTTCAAAACAGAGTgcatattaaaaaaatcagcGTTCAGC
TTTACGaagaacatttaaaaagttttttcaaggaCCCGACTTGGATTAAC
AAGCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAACAAG
AGCCGAGGAGAATGAAGAAGGTTTTCAAGAAGTCTCCAAAATACTATACG
ATGCTTTTAAAGGTGTTGGATTCGCATATGTTGTCGAACTAAAGGATTTC
AATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTCAATTTGCCACC
CGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACCTGACAATGCGA
ACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTCATTCTCATAAG
GAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCATTAAGAAGAAA
AGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGATGGAAAATTAT
ATTGTCGTAACATTTTGGAAGAGAAGAACCCATGGCCCATTACTGAAGAT
CAGAAAATGGATGATGGATTTCGAATATTCATGCAAAAGAATTATAAAAT
CTATGAAAATGGCTGTCTGACTATTATGAGGATGCTTGCAAATACTTTAG
GGTTCGAAAGAAACTTTTTCGATGGTTTATTGTTTGGACCAAAACATCTT
TCTACGCATCGTTTGATTCACTATCCATCTCGACTTGGTGATCCAGCCTC
GATTCCAAAAGAAGCTTGGGATGGAGATCAAGCTATTGTCACCGGTGAAC
ATTTTGATACTGGAATCTTAACCATCCTTGCAACCTTCGAAAATGCTGGT
TTACAAATCAAACCTAATGGTTACTCAAAATGGATAGACGttcctgcaag
aaaagatcatTTGGTGATTAACATTGGTAACCTCTTAGCAGATATGGTTG
AAAATCGTCTAGTGGCAACGAATCATCGAGTCGTAGATATTGGAATCTCT
CGGTACTCAGTCCCATTCTTTTTAGAACCACGTTACGATGGAGATCTATC
GAAAACTATTTTCGGTAATAAGTTAAAAAGTGTCGGAGAGTTTACAACAT
TTGGTCGGTATATGACAAATCGAACGAGAATGTTTGCAGAATATGCGTCT
ATTGATTGGGGATATATTGACTAATATTGTTTTACCTAGCAGCGAGCTTA
TGTATTAGAGAGAAATCAAAGGAGACGGTATAAAACAGAGTTAATGTGTC
GCAAGAATCGCCATCCACTTTGCTGGACGAtagtaaaaacatcaaaaaat
gaGCAAAGGTGATATAGAGCCGTCCCGTCCTTACCATCCCCCTCGTTATC
CTCCTATAGATAAACTCGCAATTAATTGTATATACATTAATAATTGATTA
TTTCCTTTAGCCCTATTCAActtaggcttttaggggcggttcagaactag
gggggcttttcctgtaccaccccttaacttttgatctagtgggtcttttt
ggataaaatttggAACACAAGATCCTTTTCACGTAAGGtaatttttgacc
aaaattttttttgatgacgtcactcagcccaaagtgagcaaaaaccgaaa
atttcctttgttcttataaatagctattgtattctaacaaaggctttaga
aaaaagttgcctgagttgaaaatgcttattttatcctaaat

Run BLAST on NCBI

protein sequence of TCONS_00070495-protein

>TCONS_00070495-protein ID=TCONS_00070495-protein|Name=TCONS_00070495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
DIYCSLENGRQDLYVSNKNMDTFLKSFFIVALSCIVFQNRVHIKKISVQL
YEEHLKSFFKDPTWINKLREEDIFELAKINLTRAEENEEGFQEVSKILYD
AFKGVGFAYVVELKDFNPDELLYWTKWFFNLPPDVKKTVTKSTWQPDNAN
TYRGLYPSIPGGHSHKEALETGLFDMEEPLRRKATLEDLVNTTKKDGKLY
CRNILEEKNPWPITEDQKMDDGFRIFMQKNYKIYENGCLTIMRMLANTLG
FERNFFDGLLFGPKHLSTHRLIHYPSRLGDPASIPKEAWDGDQAIVTGEH
FDTGILTILATFENAGLQIKPNGYSKWIDVPARKDHLVINIGNLLADMVE
NRLVATNHRVVDIGISRYSVPFFLEPRYDGDLSKTIFGNKLKSVGEFTTF
GRYMTNRTRMFAEYASIDWGYID

Run BLAST on NCBI

transcript from alignment at scaffold_56:7970..12698-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00070495 ID=TCONS_00070495|Name=TCONS_00070495|organism=Clytia hemisphaerica|type=transcript|length=4729bp|location=Sequence derived from alignment at scaffold_56:7970..12698- (Clytia hemisphaerica)
CTGACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGTGTCA
AATAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTTTAAG
TTGTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAGCGTTCAGC
TTTACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTTGGATTAAC
AAGCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAACAAG
AGCCGAGGAGAATGAAGAAGGTTTTCAAGAAGTCTCCAAAATACTATACG
ATGCTTTTAAAGGTAAAGATCAGTTTTCGGTACACTAAGACCAAGTTTGC
GTCGGTTAAATGGACGATGCAATATCGTGATGGAACAATTAAGCGACGGT
AGTGAGCACGGAATTTTTAGATTCGTTCTATTTTTCACTAAAAAAGCTTG
CAAAATCCGGCAAAGGAGTGCAAAATAAGCAATATCTACTGAAACATTTG
ACACTTCTCGTCTTTTGGTGCCCCCTTTCTACCTCCACTTCTACCATTAG
ACTGGAGCAATGGTGAATACAGCTAATTTTCAACTCCTATTTTCACCATT
TTCTTTTTGTCAACAAAAGGGGTGTTGATATTTTCCAATTTTGACTTTCC
AGTTTTGACTTCCTTAGGTGTTGGATTCGCATATGTTGTCGAACTAAAGG
ATTTCAATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTCAATTTG
CCACCCGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACCTGACAA
TGCGAACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTCATTCTC
ATAAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCATTAAGA
AGAAAAGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGATGGAAA
GTAAGTGATGTCTTTTAGTAGGTTCGTCTTGCAAATCCTGCCTTTGTAAC
ACGCATGCATAAATTGTCGCTCTGTTAAACTACATGTAGTTAATTCCCGT
GTTAAACAAGGAGGAATGAATCCGTAGGGGTGTTTCAGTCGATTTCGGTC
GGGGTTGTAGACGACAAAATTTGTCGTTCTTTATGAAATTTGTCGTTCTT
TTTGTCTATTTTTAGTAATGCAGAATTTGTTACATAGACCCCTTTCTTTC
GATCACACCCCTGTCTCAGCACAAAAGGTTCAAATTCTCCTAGATATAAA
AAATATACTGAAGATTGCCAAGGGTTAAACAACATGCTTAAGAAAGACAA
AAAAAGTTTCATATACCCGCATCACATGTTTGCGTTTTTTTTCCAACAGA
GGAAAATGGAAAATTGATTGCAATAATTTAGGTAGCTTTCATCATCAAAA
AGATTATTTTTATCGAAAAGATTTAAATTACCGGGAACAACAATGTGATT
AAAAGTAGTCTCAGGTTCCAAAATCAACCCCCCCCCCCCCTTTTTAATTT
TTAAAAAATTTTTAATTTTTTAAAAAAAAAGGGGCCTTTTTTTTTTTTCA
AAAAAAAAATTTTTTTTATTAAAAAAATTTAAATTATCGGGAACACAAAT
TGAAATAAAAAAAATTCCAGGTTCCAAAAAAAACCCCCCCCCCCCGCTTG
TTAATTTTTCGAATACTTTCTAACCCTCCAATCCTTATTAGGAAATCCCC
CCCCCCGTTTATTAATTTTAAAGAATTTTTTCAGCTTTCAAAAAGAAAGG
GTCCTTTATTCTACTCTAAATATCCCGATGTTAGCCTATATTTACCTTAT
TTTGGGGTTTTCGTAATTACAATTTCCCCGTTTATTAAAGTTTTGAAAAA
TTTCCAGCCCACCCCCTCCGTTTATTTGGAACCTAAGAGTAGTTAAATGC
CATCAATATTTTCTTCTCTTGTAGATTATATTGTCGTAACATTTTGGAAG
AGAAGAACCCATGGCCCATTACTGAAGATCAGAAAATGGATGATGGATTT
CGAATATTCATGCAAAAGAATTATAAAATCTATGAAAATGGCTGTCTGAC
TATTATGAGGATGCTTGCAAATACTTTAGGTTTACCAACAAACAAATTCT
AATAGCGAGTTTATGTAATTGCAGCTTTGAGGACGGTAAGGTGACTAGCG
CAATTCGGAATAATCCATAGCTCAAAAGGCCGGTCTCCACTTCCGCGCTA
AGATCGCCCTTTTGGCTTCAATCCTTTTTGCTTGGAAAATAGATTACGTC
ATAAAAATGTAGCGCACGTTCGAAAAAAAGACCGGCCTTAAATGCATGCT
GGTTTACCATTGTCCTCAGTTAGTCAAGATCTAGTCAATTTAGAACCTTA
CCGCATCTCCGTCACAGACATAAACTCGGTATTACTTCAAATAAGGCCTA
TAAGAAACTCCTAAACTTATAATAATTTATTGCTTTGTTTACCAGTTAAC
AACATCCGTTAGCGATGCTATACACCTTTAAAAATATAATTCATTGCACT
ACGATAATACACATTTTCGACCCGTCGCACGGTCAGGTGCGTGCCACTTA
ATTATATGATTATCTCCCTAAACTCGATCCAATCCTGCTTTTACACATTT
TTCTATTGTCCATAGGTGTGAAAAAAGGACTGGGACGGTTTTAGTGGGAT
AAAGCAGACAAAAAAATGCCCGCCTGGCAATTAGTGGCTACGGTCAAAAA
GGTGTATAAATTGGAAAATGAAATAAAAATTGAAGAAGGAAATAACGGAC
TTATATGCTTTAATGCTAGCCGTGTTATACTTGATGGGCTTGTTTGTTTT
TGTAGGATTTCTATAGCACGTAATCTCAGGGATTTGGGAAAATAAGTAGA
TTCATCGACTGTAAGAGCCGACCAACTGACATACAACGTTGTTTCAACGT
CTAAAACGTCCATATAACACTAGATGAACGTTATGAACGTTGAAACAACG
TTCTGTGCCAGCTGGGTAGGTAAAAAATGATTTTTCTTATCGGATTTTTC
TTCATCTTCTGCTATTTTAGGGTTCGAAAGAAACTTTTTCGATGGTTTAT
TGTTTGGACCAAAACATCTTTCTACGCATCGTTTGATTCACTATCCATCT
CGACTTGGTGATCCAGCCTCGATTCCAAAAGAAGCTTGGGATGGAGATCA
AGCTATTGTCACCGGTGAGTGGTCAAATAAGTAAATGGATTTTTTTTTCA
GTTTAAAGCTGCATGATCCAAAGCTTACACATCTTTTTTGTAAGAACTTC
CGAAATTTTTGAAACTTTTGGATGTCCTGAACTTTTTGAGTTTTAAGCTT
GAAATATTGTTTATTTTCACGATTCTGTGTTTTTGTGCAATTTCCTAAAT
AAGGTGTTTTATGGTTTATGAAGTCATAAAATGTTCTTAATTTGCCCTAG
ATATTTTGGTTATTGAAGCCTTGTGCTCTTATAAAGTTTGATCTTTGTAA
AAAAACATGTATTCAAAAATACTTAAAGGGCATGAGATTAAAGGTTTTAT
TTTTACATAAGTGCTTCCGTTTCATATCAGACACATACTTCATATCAGGA
CAGTGTCTTGCTATTGTTATATTATGCTTACATAAGCAAAAAAATGTTTT
TCTTTTCCTCTTTCTGACTAATCTTGCATCACATATGTGTCAATTCAATG
TGAATAAGCAAACATTCTCACTCTTATTTAAAAACAAAACCTTTAAGAGA
CATTAATTACTCATGTTTAAGCTTGTTTGGGTTGAACAGGTGGGTTATTG
AGAGTCAACTGAGTGCAAATTGAGAATTTGGGAATCTTAGATGTTGAAAT
TTAAACTTTTTTCTATTCCATCAAAATTTTAGGTGAACATTTTGATACTG
GAATCTTAACCATCCTTGCAACCTTCGAAAATGCTGGTTTACAAATCAAA
CCTAATGGTTACTCAAAATGGATAGACGTTCCTGCAAGAAAAGATCATTT
GGTGATTAACATTGGTAACCTCTTAGCAGATATGGTTGAAAATCGTCTAG
TGGCAACGAATCATCGAGTCGTAGATATTGGAATCTCTCGGTACTCAGTC
CCATTCTTTTTAGAACCACGTTACGATGGAGATCTATCGAAAACTATTTT
CGGTAATAAGTTAAAAAGTGTCGGAGAGTTTACAACATTTGGTCGGTATA
TGACAAATCGAACGAGAATGTTTGCAGAATATGCGTCTATTGATTGGGGA
TATATTGACTAATATTGTTTTACCTAGCAGCGAGCTTATGTATTAGAGAG
AAATCAAAGGAGACGGTATAAAACAGAGTTAATGTGTCGCAAGAATCGCC
ATCCACTTTGCTGGACGATAGTAAAAACATCAAAAAATGAGCAAAGGTGA
TATAGAGCCGTCCCGTCCTTACCATCCCCCTCGTTATCCTCCTATAGATA
AACTCGCAATTAATTGTATATACATTAATAATTGATTATTTCCTTTAGCC
CTATTCAACTTAGGCTTTTAGGGGCGGTTCAGAACTAGGGGGGCTTTTCC
TGTACCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGGATAAAATTTG
GAACACAAGATCCTTTTCACGTAAGGTAATTTTTGACCAAAATTTTTTTT
GATGACGTCACTCAGCCCAAAGTGAGCAAAAACCGAAAATTTCCTTTGTT
CTTATAAATAGCTATTGTATTCTAACAAAGGCTTTAGAAAAAAGTTGCCT
GAGTTGAAAATGCTTATTTTATCCTAAAT

Coding sequence (CDS) from alignment at scaffold_56:7970..12698-

>TCONS_00070495 ID=TCONS_00070495|Name=TCONS_00070495|organism=Clytia hemisphaerica|type=CDS|length=6360bp|location=Sequence derived from alignment at scaffold_56:7970..12698- (Clytia hemisphaerica)
GTGAACATTTTGATACTGGAATCTTAACCATCCTTGCAACCTTCGAAAAT
GCTGGTTTACAAATCAAACCTAATGGTTACTCAAAATGGATAGACGTTCC
TGCAAGAAAAGATCATTTGGTGATTAACATTGGTAACCTCTTAGCAGATA
TGGTTGAAAATCGTCTAGTGGCAACGAATCATCGAGTCGTAGATATTGGA
ATCTCTCGGTACTCAGTCCCATTCTTTTTAGAACCACGTTACGATGGAGA
TCTATCGAAAACTATTTTCGGTAATAAGTTAAAAAGTGTCGGAGAGTTTA
CAACATTTGGTCGGTATATGACAAATCGAACGAGAATGTTTGCAGAATAT
GCGTCTATTGATTGGGGATATATTGACTAAGGTTCGAAAGAAACTTTTTC
GATGGTTTATTGTTTGGACCAAAACATCTTTCTACGCATCGTTTGATTCA
CTATCCATCTCGACTTGGTGATCCAGCCTCGATTCCAAAAGAAGCTTGGG
ATGGAGATCAAGCTATTGTCACCGATTATATTGTCGTAACATTTTGGAAG
AGAAGAACCCATGGCCCATTACTGAAGATCAGAAAATGGATGATGGATTT
CGAATATTCATGCAAAAGAATTATAAAATCTATGAAAATGGCTGTCTGAC
TATTATGAGGATGCTTGCAAATACTTTAGGTGTTGGATTCGCATATGTTG
TCGAACTAAAGGATTTCAATCCGGACGAACTGTTATACTGGACAAAATGG
TTTTTCAATTTGCCACCCGATGTAAAAAAAACAGTGACCAAAAGTACATG
GCAACCTGACAATGCGAACACGTATAGAGGCTTATATCCAAGTATTCCTG
GAGGTCATTCTCATAAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAG
GAGCCATTAAGAAGAAAAGCCACTTTGGAAGATCTTGTAAACACAACTAA
GAAGGATGGAAAGACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTT
GTATGTGTCAAATAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAG
TTGCTTTAAGTTGTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATC
AGCGTTCAGCTTTACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGAC
TTGGATTAACAAGCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAA
ATTTAACAAGAGCCGAGGAGAATGAAGAAGGTTTTCAAGAAGTCTCCAAA
ATACTATACGATGCTTTTAAAGGTGAACATTTTGATACTGGAATCTTAAC
CATCCTTGCAACCTTCGAAAATGCTGGTTTACAAATCAAACCTAATGGTT
ACTCAAAATGGATAGACGTTCCTGCAAGAAAAGATCATTTGGTGATTAAC
ATTGGTAACCTCTTAGCAGATATGGTTGAAAATCGTCTAGTGGCAACGAA
TCATCGAGTCGTAGATATTGGAATCTCTCGGTACTCAGTCCCATTCTTTT
TAGAACCACGTTACGATGGAGATCTATCGAAAACTATTTTCGGTAATAAG
TTAAAAAGTGTCGGAGAGTTTACAACATTTGGTCGGTATATGACAAATCG
AACGAGAATGTTTGCAGAATATGCGTCTATTGATTGGGGATATATTGACT
AAGGTTCGAAAGAAACTTTTTCGATGGTTTATTGTTTGGACCAAAACATC
TTTCTACGCATCGTTTGATTCACTATCCATCTCGACTTGGTGATCCAGCC
TCGATTCCAAAAGAAGCTTGGGATGGAGATCAAGCTATTGTCACCGATTA
TATTGTCGTAACATTTTGGAAGAGAAGAACCCATGGCCCATTACTGAAGA
TCAGAAAATGGATGATGGATTTCGAATATTCATGCAAAAGAATTATAAAA
TCTATGAAAATGGCTGTCTGACTATTATGAGGATGCTTGCAAATACTTTA
GGTGTTGGATTCGCATATGTTGTCGAACTAAAGGATTTCAATCCGGACGA
ACTGTTATACTGGACAAAATGGTTTTTCAATTTGCCACCCGATGTAAAAA
AAACAGTGACCAAAAGTACATGGCAACCTGACAATGCGAACACGTATAGA
GGCTTATATCCAAGTATTCCTGGAGGTCATTCTCATAAGGAAGCTTTAGA
AACAGGTCTTTTCGATATGGAGGAGCCATTAAGAAGAAAAGCCACTTTGG
AAGATCTTGTAAACACAACTAAGAAGGATGGAAAGACATTTATTGCAGTT
TGGAGAATGGTAGACAAGACTTGTATGTGTCAAATAAGAACATGGACACT
TTTCTTAAGAGTTTTTTCATAGTTGCTTTAAGTTGTATAGTTTTTCAAAA
CAGAGTGCATATTAAAAAAATCAGCGTTCAGCTTTACGAAGAACATTTAA
AAAGTTTTTTCAAGGACCCGACTTGGATTAACAAGCTACGGGAAGAAGAT
ATTTTCGAACTTGCAAAGATAAATTTAACAAGAGCCGAGGAGAATGAAGA
AGGTTTTCAAGAAGTCTCCAAAATACTATACGATGCTTTTAAAGGTGAAC
ATTTTGATACTGGAATCTTAACCATCCTTGCAACCTTCGAAAATGCTGGT
TTACAAATCAAACCTAATGGTTACTCAAAATGGATAGACGTTCCTGCAAG
AAAAGATCATTTGGTGATTAACATTGGTAACCTCTTAGCAGATATGGTTG
AAAATCGTCTAGTGGCAACGAATCATCGAGTCGTAGATATTGGAATCTCT
CGGTACTCAGTCCCATTCTTTTTAGAACCACGTTACGATGGAGATCTATC
GAAAACTATTTTCGGTAATAAGTTAAAAAGTGTCGGAGAGTTTACAACAT
TTGGTCGGTATATGACAAATCGAACGAGAATGTTTGCAGAATATGCGTCT
ATTGATTGGGGATATATTGACTAAGGTTCGAAAGAAACTTTTTCGATGGT
TTATTGTTTGGACCAAAACATCTTTCTACGCATCGTTTGATTCACTATCC
ATCTCGACTTGGTGATCCAGCCTCGATTCCAAAAGAAGCTTGGGATGGAG
ATCAAGCTATTGTCACCGATTATATTGTCGTAACATTTTGGAAGAGAAGA
ACCCATGGCCCATTACTGAAGATCAGAAAATGGATGATGGATTTCGAATA
TTCATGCAAAAGAATTATAAAATCTATGAAAATGGCTGTCTGACTATTAT
GAGGATGCTTGCAAATACTTTAGGTGTTGGATTCGCATATGTTGTCGAAC
TAAAGGATTTCAATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTC
AATTTGCCACCCGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACC
TGACAATGCGAACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTC
ATTCTCATAAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCA
TTAAGAAGAAAAGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGA
TGGAAAGACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGT
GTCAAATAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTT
TAAGTTGTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAGCGTT
CAGCTTTACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTTGGAT
TAACAAGCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAA
CAAGAGCCGAGGAGAATGAAGAAGGTTTTCAAGAAGTCTCCAAAATACTA
TACGATGCTTTTAAAGGTGAACATTTTGATACTGGAATCTTAACCATCCT
TGCAACCTTCGAAAATGCTGGTTTACAAATCAAACCTAATGGTTACTCAA
AATGGATAGACGTTCCTGCAAGAAAAGATCATTTGGTGATTAACATTGGT
AACCTCTTAGCAGATATGGTTGAAAATCGTCTAGTGGCAACGAATCATCG
AGTCGTAGATATTGGAATCTCTCGGTACTCAGTCCCATTCTTTTTAGAAC
CACGTTACGATGGAGATCTATCGAAAACTATTTTCGGTAATAAGTTAAAA
AGTGTCGGAGAGTTTACAACATTTGGTCGGTATATGACAAATCGAACGAG
AATGTTTGCAGAATATGCGTCTATTGATTGGGGATATATTGACTAAGGTT
CGAAAGAAACTTTTTCGATGGTTTATTGTTTGGACCAAAACATCTTTCTA
CGCATCGTTTGATTCACTATCCATCTCGACTTGGTGATCCAGCCTCGATT
CCAAAAGAAGCTTGGGATGGAGATCAAGCTATTGTCACCGATTATATTGT
CGTAACATTTTGGAAGAGAAGAACCCATGGCCCATTACTGAAGATCAGAA
AATGGATGATGGATTTCGAATATTCATGCAAAAGAATTATAAAATCTATG
AAAATGGCTGTCTGACTATTATGAGGATGCTTGCAAATACTTTAGGTGTT
GGATTCGCATATGTTGTCGAACTAAAGGATTTCAATCCGGACGAACTGTT
ATACTGGACAAAATGGTTTTTCAATTTGCCACCCGATGTAAAAAAAACAG
TGACCAAAAGTACATGGCAACCTGACAATGCGAACACGTATAGAGGCTTA
TATCCAAGTATTCCTGGAGGTCATTCTCATAAGGAAGCTTTAGAAACAGG
TCTTTTCGATATGGAGGAGCCATTAAGAAGAAAAGCCACTTTGGAAGATC
TTGTAAACACAACTAAGAAGGATGGAAAGACATTTATTGCAGTTTGGAGA
ATGGTAGACAAGACTTGTATGTGTCAAATAAGAACATGGACACTTTTCTT
AAGAGTTTTTTCATAGTTGCTTTAAGTTGTATAGTTTTTCAAAACAGAGT
GCATATTAAAAAAATCAGCGTTCAGCTTTACGAAGAACATTTAAAAAGTT
TTTTCAAGGACCCGACTTGGATTAACAAGCTACGGGAAGAAGATATTTTC
GAACTTGCAAAGATAAATTTAACAAGAGCCGAGGAGAATGAAGAAGGTTT
TCAAGAAGTCTCCAAAATACTATACGATGCTTTTAAAGGTGAACATTTTG
ATACTGGAATCTTAACCATCCTTGCAACCTTCGAAAATGCTGGTTTACAA
ATCAAACCTAATGGTTACTCAAAATGGATAGACGTTCCTGCAAGAAAAGA
TCATTTGGTGATTAACATTGGTAACCTCTTAGCAGATATGGTTGAAAATC
GTCTAGTGGCAACGAATCATCGAGTCGTAGATATTGGAATCTCTCGGTAC
TCAGTCCCATTCTTTTTAGAACCACGTTACGATGGAGATCTATCGAAAAC
TATTTTCGGTAATAAGTTAAAAAGTGTCGGAGAGTTTACAACATTTGGTC
GGTATATGACAAATCGAACGAGAATGTTTGCAGAATATGCGTCTATTGAT
TGGGGATATATTGACTAAGGTTCGAAAGAAACTTTTTCGATGGTTTATTG
TTTGGACCAAAACATCTTTCTACGCATCGTTTGATTCACTATCCATCTCG
ACTTGGTGATCCAGCCTCGATTCCAAAAGAAGCTTGGGATGGAGATCAAG
CTATTGTCACCGATTATATTGTCGTAACATTTTGGAAGAGAAGAACCCAT
GGCCCATTACTGAAGATCAGAAAATGGATGATGGATTTCGAATATTCATG
CAAAAGAATTATAAAATCTATGAAAATGGCTGTCTGACTATTATGAGGAT
GCTTGCAAATACTTTAGGTGTTGGATTCGCATATGTTGTCGAACTAAAGG
ATTTCAATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTCAATTTG
CCACCCGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACCTGACAA
TGCGAACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTCATTCTC
ATAAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCATTAAGA
AGAAAAGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGATGGAAA
GACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGTGTCAAA
TAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTTTAAGTT
GTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAGCGTTCAGCTT
TACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTTGGATTAACAA
GCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAACAAGAG
CCGAGGAGAATGAAGAAGGTTTTCAAGAAGTCTCCAAAATACTATACGAT
GCTTTTAAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_043887	XLOC_043887	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00070495-protein	TCONS_00070495-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_56	supercontig	scaffold_56:7970..12698 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.185747	0.241222	0.210313	0	0	0	6.188	5.78523	6.53047	4.46281	4.16901	4.57685	6.50634	7.19379	5.62386	7.86574	9.31978	14.4726	5.27617	5.70295	7.65061	6.82037	4.41479	5.00333	4.38884	4.29213	4.21151	2.13988	9.2127	6.4998

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR027443	IPNS-like
IPR005123	Oxoglu/Fe-dep_dioxygenase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016491	oxidoreductase activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00070495 vs. Swiss-Prot (Human)

BLAST of TCONS_00070495 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00070495 (transcript) - C. hemisphaerica