TCONS_00070499 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00070499
Unique Name	TCONS_00070499
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5708

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_56:123447..135972-

transcript sequence

>TCONS_00070499 ID=TCONS_00070499|Name=TCONS_00070499|organism=Clytia hemisphaerica|type=transcript|length=5708bp
TTTAGATTACCAATGTAACTATGAAGCTGGCTTTGGTTACGGTGGTTCAC
AATATTACATTGGACAAAAACAAAGCCAAGCACATTGCGCTGACAATTGT
CATCAAATGAGTATCGCTACCAACCCCAACGTCAATGGGGCCTCGTACGA
GGAACGTACGCGTCGCTGTATCTGCAAGTCGCAAATGAGGGGCCGAGAAC
GTAGTTTAACTTGGAAAAGTTGTTTATTTGAAGCAGCTGCACCTACAACG
TCAGCTGTGACTGCTTACAAACCGATATCAAAAGTTTCAGGTtccaaaga
gaaaaaaaagaagaagaaagaccGCAAGAAAAAGAATCGAAAGAACAAAG
GCGGCAAACGAAAGAACAAGAAACgtaaaaataagaataagaaaaacaaa
aagaagaagaagaaaacaacGACATCAACCCCGTTCAAAACTCTagtaaa
atcaacaaaaacctCGCCAAAGATAACTGCAACTACTTCAACCTACGGCA
ACAACCGTCACGACNGACAATAACCTCGCCAAAGACTACTACAACTACTA
CTTCAACCTCTACATCAACGAATCCAACAACAACATCAACAGCGACGACG
ACAACAACCACAACGACATTAACGAAGACAACACCTTTATTGACAACATC
TACCAGGCCGACAACAACATCACGTACACCAACAATGGCGTTGCCTTCAC
CATCGACGACTCTGATAGAAAAGACACGAGCATTGATTAATACGATGGCA
CCTGAAGTAACGACATCTTCGAAAGCATCGACAACAGTCACTATAGCTAC
TACAAAAACTACCATGCCAAGCAATATAATTTCAACTCTAAAGCCTGTAT
TCACGACATCTGCTTTGACATCAACAACATCAAAGTCGACAAAAGAAACT
CtagcagcaacaacaacaacagcctcacaatcagccacaacatCACCTTC
ACCTTCAACATCCACAACAGTTACAACACCATCTCCAGTTGTTGTCAAGA
TTACTTCAAGAGAAGCAGGCAACACACTGACAACAGAAACGACACCAACA
CCTGCTACAGTTCAAAAGACTAAAGCAACCATAGTAACAATGACCACCAA
CTTACCTGCTATTCTCAAAAGAGAAACTACACAAGATGCCAAATTTCCAA
CTGCGATGGTATCAGTAGAAACCTCTACGGACCTTTACCGATCAATAATG
ACTAGCAGATCACCAAGCCAATCTACAAAGCCATCTACGAAACAAGGTAG
AACAACCAGAAAGACATCTGCAGAAATACCTCGACAAACCTCAACAGAAG
GGTCACCAGAAACAACACCAAATACTAACAAAGTTACGACGAAACCTTTA
GTTACCAAATTACTCGTGAAAAATAAATCACCGTCAAAGTCcgtaagaaa
aacaacaatggaGAATTCATCGCAGGCTTTAGTAGCTTCTTCTACTATTT
CACCTAAGACAGACAATACCACACCCACACTTCGAGTAAAAGATGCAACG
TCTGCGAAATCTTCTTTGAATTTACCGACAATATCAACAGTAGATTTATT
GTCAAATGTTTTGACAAAAGAAGATTATACAACCTCTTCGAAAACTGGCA
ACAATGTCTTCTCTGTACAATCAACAACTACACCTGTAGATGAAAAAACA
GAAGCCTTGGTAGAAACTACGACTTTTATTCCAACGGAACTTCCAACTGA
TACGATCTCATCCACGAGTAAGAAATATGAATCAACTACACAGAAATCAA
CTACAATCACATCTACTAAAACAACAGCGATAGAAGTTGAATCCAATGGC
GATTCTGCATTGACTACGCGGACAGCAATGGTAACTGAATCTCCAAATAC
CACATCTCCGAAAGGAGTAGTTGATACAACAATATCGTCAATAACCGAAG
AAGAATCCCCCACACCTATAACAGATCCTACGACAACTACTGATATCGCG
AAATCTGCTCTGTCTTCTACCACAGAATCAACGACCGTTTTACCAACTAA
GCCGTCGGAAATAATATCTCCGGAAGACAAATCTACTGCCACCTTGTCAT
CTACAACTGAATTACCAATCGTAGGAGGAAACTCAATCCTCTCCACATCT
ATAGAAGACTCTACGACGACCACTACAATTTTGGCTACATCTTCAACGTC
AACAAAGTCAACGATCACAAGAGAAATAACACCTCCTGCGACATCTACTA
AAGACACAACAAGCACAGCATCAAACCTCGACGACTGCACAACCCACGAC
ACGGAGACAGAACCATCTCCGCCACCTCAATACTCAACAACTGAAGACAA
TGAAGGTGTTCCGACTGAAGAAGCTGATAAAGCCACCGAATTACCAACTA
ATAAAAGAAACGAATCTACCTCAACTTCTGAACCATTGTCAACTTCTAAT
ACTCGAAACAATCCAACTCAAATTCTAATTACCTCAGATGAAGTCAGTAC
AACAACGCAATCTCAAGACATAGACACGAAAAACTCAACATTGGTAACAT
TAAACACCTCAACCAAACCAACTAACATAGTCACTACACCATCGGATGAA
TTCGAACAAAAAGACACTGAAAAGCCTACAACTTCCACGTTGGAACCTGC
AACATTCGAGACAAAACGCCAAGAGGAGTCAACGACCAAGCGTCCAACTT
CGACACCGTCTGTTGGATTAAGTAATGAAACTGACTTGCTCAACAATGCA
ACATTAGAATCACCAGATCCGATTACTACAACATCCAAACCATCCTCAAA
AAGCTTCTACATCACTGAGCCTGAATACGAAACAACTGAGACGAGACCTG
CAACTGAAACAACCAGCTCACAAAAGGTTTCAGCTACCCAAGAACCACTA
TCAGAACGCACTACGTCGCCATTATCAAGTCCAGTGGTGAACGTTGAAAA
TACTTCATTACCAGCCTCCACAAGTGATACATCTGTCGGGTTGCGCACCA
CTGAGACTTTGTCAACCTCTAAATACGCCGGAAACTTCACCTCGAGTATG
AATAAGATGCAGAATGACACTTTTAAACCGACGTCAGAGGCTAGAAATAA
TTTCAACATTATTCTTAAAAACAATGACTCGGAAAGCTCGAATGCAGCGA
GAGATACTAAAGGACCAATTACTCCAAGACCTACAGTGATCATCAATGTT
AATAAAACCTCATCTGACAATGATATTCATCCAAATGATAAAATTAATTC
AACAGTGAGTGTCACACCCGTACAATCCATATATTCCCCTACCAACCATT
CCCTCGTGTTCGACAATAAAACCATTACATTGAATCCCAACACCACAGTT
GCCACAAAAACTCAGAAGTCAAGTACCAAAGTCTTTCTGAACGTTACTAA
AGCTACAACGGAAGGCAATGTATTGACAATCTTCAACCTAGCAACAACCG
GCGGGCCCAAGTCTGAAAGACCTGAGACACCTCTATTCAAAAATATCACA
CGAggcgaaaaagaagaaaaatacttCACACCTCCAAACCTACCAACAAT
ACAGCctaaatctgaaaatttcactAAAGCCCAAAACACAGTAAGCAGTA
CTGAAGAAACCGCCATTAAAAACGAACGCTTAGAACTCAAAACATTAAGC
TGCGATAATGGAATGATGAGAATAATATTAAGAACACAAAATGATGAGAA
CAGTTTGAGACAGCATACTAAGAATATCACCTTAAGCGACACGAGTTGCC
AATTTTCAGTGCTTAACCAGCAAGAGATGATCTTGGAAACGGAGTATGGA
AGATGTGGTGCAATAGTCCATCAAACAGGCAAACAtattatctataagaa
tcagaTATTTCATTGGGATGATATGGAAATTGTCGATAACGTCATTCGCT
CAAACGGTGACGGCGAACCAAGTCAAGAAATCTTCGTCAAATGTAAAGTT
GAACGTCAATATCAAAGTTCACTGGATGGGAAATTCAAACCTAAACATTC
GTCAGTAGTCCAGATTACTAAAACTGAGTATGGAAAAATGGAACTATCGA
TGTCTTTATTCAAAACGTCACTGTTCAACAACAAATACATCACAAGGGAA
TTCCCCATTGTCGTCAACATGCAGGACCTGTTATACGTGGAACTTTCAAT
GAACACCACAAGTAAAGAGTTAGCGTTATCTCCACAACAATGTTACGCAA
CAATTACTGAAGATCCTGAGGATGATTTTAGATATTCCATCTTCAAAGAT
CGGTGTCCGACAGATGATACTTTCAACGTTGTCCGGAAAACATCACACAC
GATGCAATTTCAAACAAAGGTTTTTGACTTCCtcaagaaaaacaaagGTA
TTTACATGCATTGCACTAGTACAATTTGTAAGGCTGATTCAAAACATCCT
GTCTGTGAATTTGGTTGTGAACCTGCGCAAACAGATCGAAAGAATCGACG
TAGATTGGACCACAAGGAGAAAGCAGCGAATGAAATTTATACAGTCACCA
GTGGGTTTATTGAATTCAACCATGGAGATGATGATTTTCTCAATAGCGNA
AAAGCACCGAATGAAATTTATACAGTCACCAGTGGGTTTATTGAATTCAA
CCATGGAGATGATAATTTTCTCAATAGCGTCGAATTAGCAGCTGTTCTTA
TCGCCGTCACTCTTATTGCCGTCGTCAGTATCATCGCTGCCGTCTACTTT
TACCGACAAAGACGTCAAAATATCAACAATACTAGTTCAAGTGACTTAGT
GACGTATTTGTAGATTTGCTTGGAGTGCTATAAATTAAATTAGTGTATAA
TGCACTTATCACTTTATCgccacccagctggcacacaacgttgtttcaac
gtttatctaacgttcacaacgtccatttaacgttagattaacgttgaaac
aacgttgtgtgccagctgggcaaaGAGGGCTGAACTCGATTTTACCAATG
GTGGATGGTGGATGGTGGATGGTGGATGGTACCAAATGTATGTGAGTATA
AATCGATAGACCTTTTGCAGGACGCATCATTTTAATAAAAACTCTACTCA
TTAAAACAACGATAGGTATAAGAAAACATTTATTAGTACACGCGTTGACT
AATTATactttcttttatcattgttaTGACGCTGGAATTTTTCATTATTC
AACATCACATCGTTCTTAGGAGTCTGTTTATCTAAAGttggatacaggag
gtaggctatcttagtAATGGAGAGTAAtgagtttccatataaggtaatac
gatgataaagtgcactctcctccattggttatagcctccctctgtatccg
agcctgtcaagaccatctaaaaagaacgacaaaccctaaccctaactatc
aaagaacgacatgTTTTGCCGTTCCTCTTTGTTACGGGAATTAACTGCAT
GTGGTTTAAACGAAcgataaattacgcatgcgtataagtctctatttggg
tgggctggaaacattagatgaactagCTCCTAGTAAAAGGTCTATGGATG
AAAGGCTTTCATAAACATTTGACACGTCGGGATGACTTATAGATCCACTG
AAAAACCGAATTCAAATGCAGAATATGGTGACAAAGATGATTTCAGGCCA
ATGATGATGAAGGCAAATTTCGCAGCAAAAATACTTGCTTCGTGTCTGGT
CAGGggtggcggaggagcggaatcggcccttttttcggacggagtggcgg
aatttggcgaaaatttagacggaattacggaaattgggttctctgacgga
gacggaaa

Run BLAST on NCBI

transcript from alignment at scaffold_56:123447..135972-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00070499 ID=TCONS_00070499|Name=TCONS_00070499|organism=Clytia hemisphaerica|type=transcript|length=12526bp|location=Sequence derived from alignment at scaffold_56:123447..135972- (Clytia hemisphaerica)
TTTAGATTACCAATGTAACTATGAAGCTGGCTTTGGTTACGGTGGTTCAC
AATATTACATTGGACAAAAACAAAGCCAAGCACATTGCGCTGACAATTGT
CATCAAATGAGTATCGCTACCAACCCCAACGTCAATGGGGCCTCGTACGA
GGAACGTACGCGTCGCTGTATCTGCAAGTCGCAAATGAGGGGCCGAGAAC
GTAGTTTAACTTGGAAAAGTTGTTTATTTGAAGCAGCTGCACCTACAACG
TCAGCTGTGACTGCTTACAAACCGATATCAAAAGTTTCAGGTAACATTAC
GTTTTACATCAATTGTAGATAGTTCAACCTCTTTGCGTGGTGGTACAGTC
ACTTTCGGTCGGGGTTGCGGACGGCAAAATATTGATTTTTAAAAATTAAA
TACAAGTTTTTTTTGTCGTTCTTTACGAAATTTGTCGTTCTTTTTGTCTA
TTTTTAGTAATGCAGGATTTGTTAGATAGACCCCACTGAATTTGAAAATA
TTTTTTGCTTTAGCCTTAGTAGACTTTAGAGAGGAACATTAGTTTCCCTT
TGAAATACCGACATCTTTAGTTCGGTTTAACTGTCCTTACTCGTCCGAAA
ATGTTGAGGTTAAAACCCGCTTTCCCCTAAATTGAATGCTGGGCACCTAA
AAACTTGGATAGCCCAGTAATTTATAGTACTCTTAGACAGTCTTTTGATT
GTTTTTATTGGGTCTACAGCCAGCTGGTTTGGCTTTCTATGAACTAAACG
AAACATTGAAAGGAGCGAGGATTCGAGCTGGGAAACTCCGGTTTCAGATG
CTAACGCTCTGATTACTTGGCCATCGGTCGCTATAATTTGAGCACCAAGA
GCACCCGAATTTCATGGGATTTCTGTCAATTGAGTCTTTGTATTTATATC
TTCTCAGGTTCCAAAGAGAAAAAAAAGAAGAAGAAAGACCGCAAGAAAAA
GAATCGAAAGAACAAAGGCGGCAAACGAAAGAACAAGAAACGTAAAAATA
AGAATAAGAAAAACAAAAAGAAGAAGAAGAAAACAACGACATCAACCCCG
TTCAAAACTCTAGTAAAATCAACAAAAACCTCGCCAAAGATAACTGCAAC
TACTTCAACCTACGGCAACAACCGTCACGACNGACAATAACCTCGCCAAA
GACTACTACAACTACTACTTCAACCTCTACATCAACGAATCCAACAACAA
CATCAACAGCGACGACGACAACAACCACAACGACATTAACGAAGACAACA
CCTTTATTGACAACATCTACCAGGCCGACAACAACATCACGTACACCAAC
AATGGCGTTGCCTTCACCATCGACGACTCTGATAGAAAAGACACGAGCAT
TGATTAATACGATGGCACCTGAAGTAACGACATCTTCGAAAGCATCGACA
ACAGTCACTATAGCTACTACAAAAACTACCATGCCAAGCAATATAATTTC
AACTCTAAAGCCTGTATTCACGACATCTGCTTTGACATCAACAACATCAA
AGTCGACAAAAGAAACTCTAGCAGCAACAACAACAACAGCCTCACAATCA
GCCACAACATCACCTTCACCTTCAACATCCACAACAGTTACAACACCATC
TCCAGTTGTTGTCAAGATTACTTCAAGAGAAGCAGGCAACACACTGACAA
CAGAAACGACACCAACACCTGCTACAGTTCAAAAGACTAAAGCAACCATA
GTAACAATGACCACCAACTTACCTGCTATTCTCAAAAGAGAAACTACACA
AGATGCCAAATTTCCAACTGCGATGGTATCAGTAGAAACCTCTACGGACC
TTTACCGATCAATAATGACTAGCAGATCACCAAGCCAATCTACAAAGCCA
TCTACGAAACAAGGTAGAACAACCAGAAAGACATCTGCAGAAATACCTCG
ACAAACCTCAACAGAAGGGTCACCAGAAACAACACCAAATACTAACAAAG
TTACGACGAAACCTTTAGTTACCAAATTACTCGTGAAAAATAAATCACCG
TCAAAGTCCGTAAGAAAAACAACAATGGAGAATTCATCGCAGGCTTTAGT
AGCTTCTTCTACTATTTCACCTAAGACAGACAATACCACACCCACACTTC
GAGTAAAAGATGCAACGTCTGCGAAATCTTCTTTGAATTTACCGACAATA
TCAACAGTAGATTTATTGTCAAATGTTTTGACAAAAGAAGATTATACAAC
CTCTTCGAAAACTGGCAACAATGTCTTCTCTGTACAATCAACAACTACAC
CTGTAGATGAAAAAACAGAAGCCTTGGTAGAAACTACGACTTTTATTCCA
ACGGAACTTCCAACTGATACGATCTCATCCACGAGTAAGAAATATGAATC
AACTACACAGAAATCAACTACAATCACATCTACTAAAACAACAGCGATAG
AAGTTGAATCCAATGGCGATTCTGCATTGACTACGCGGACAGCAATGGTA
ACTGAATCTCCAAATACCACATCTCCGAAAGGAGTAGTTGATACAACAAT
ATCGTCAATAACCGAAGAAGAATCCCCCACACCTATAACAGATCCTACGA
CAACTACTGATATCGCGAAATCTGCTCTGTCTTCTACCACAGAATCAACG
ACCGTTTTACCAACTAAGCCGTCGGAAATAATATCTCCGGAAGACAAATC
TACTGCCACCTTGTCATCTACAACTGAATTACCAATCGTAGGAGGAAACT
CAATCCTCTCCACATCTATAGAAGACTCTACGACGACCACTACAATTTTG
GCTACATCTTCAACGTCAACAAAGTCAACGATCACAAGAGAAATAACACC
TCCTGCGACATCTACTAAAGACACAACAAGCACAGCATCAAACCTCGACG
ACTGCACAACCCACGACACGGAGACAGAACCATCTCCGCCACCTCAATAC
TCAACAACTGAAGACAATGAAGGTGTTCCGACTGAAGAAGCTGATAAAGC
CACCGAATTACCAACTAATAAAAGAAACGAATCTACCTCAACTTCTGAAC
CATTGTCAACTTCTAATACTCGAAACAATCCAACTCAAATTCTAATTACC
TCAGATGAAGTCAGTACAACAACGCAATCTCAAGACATAGACACGAAAAA
CTCAACATTGGTAACATTAAACACCTCAACCAAACCAACTAACATAGTCA
CTACACCATCGGATGAATTCGAACAAAAAGACACTGAAAAGCCTACAACT
TCCACGTTGGAACCTGCAACATTCGAGACAAAACGCCAAGAGGAGTCAAC
GACCAAGCGTCCAACTTCGACACCGTCTGTTGGATTAAGTAATGAAACTG
ACTTGCTCAACAATGCAACATTAGAATCACCAGATCCGATTACTACAACA
TCCAAACCATCCTCAAAAAGCTTCTACATCACTGAGCCTGAATACGAAAC
AACTGAGACGAGACCTGCAACTGAAACAACCAGCTCACAAAAGGTTTCAG
CTACCCAAGAACCACTATCAGAACGCACTACGTCGCCATTATCAAGTCCA
GTGGTGAACGTTGAAAATACTTCATTACCAGCCTCCACAAGTGATACATC
TGTCGGGTTGCGCACCACTGAGACTTTGTCAACCTCTAAATACGCCGGAA
ACTTCACCTCGAGTATGAATAAGATGCAGAATGACACTTTTAAACCGACG
TCAGAGGCTAGAAATAATTTCAACATTATTCTTAAAAACAATGACTCGGA
AAGCTCGAATGCAGCGAGAGATACTAAAGGACCAATTACTCCAAGACCTA
CAGTGATCATCAATGTTAATAAAACCTCATCTGACAATGATATTCATCCA
AATGATAAAATTAATTCAACAGTGAGTGTCACACCCGTACAATCCATATA
TTCCCCTACCAACCATTCCCTCGTGTTCGACAATAAAACCATTACATTGA
ATCCCAACACCACAGTTGCCACAAAAACTCAGAAGTCAAGTACCAAAGTC
TTTCTGAACGTTACTAAAGCTACAACGGAAGGCAATGTATTGACAATCTT
CAACCTAGCAACAACCGGCGGGCCCAAGTCTGAAAGACCTGAGACACCTC
TATTCAAAAATATCACACGAGGCGAAAAAGAAGAAAAATACTTCACACCT
CCAAACCTACCAACAATACAGCCTAAATCTGAAAATTTCACTAAAGCCCA
AAACACAGTAAGCAGTACTGAAGAAACCGCCATTAAAAACGAACGCTTAG
AACTCAAAACATTAAGCTGCGATAATGGAATGATGAGAATAATATTAAGA
ACACAAAATGATGAGAACAGTTTGAGACAGCATACTAAGAATATCACCTT
AAGCGACACGAGTTGCCAATTTTCAGTGCTTAACCAGCAAGAGATGATCT
TGGAAACGGAGTATGGAAGATGTGGTGCAATAGTCCATCAAACAGGTCAG
TAAATTAAACTTCTACACATCAATCTTTAGGGCTACATACACTACACAAT
ATATTGCCAGGCAGTATATTGCCAATATATTGACGATATATTACTAAGTG
CCAGCAATATATTGATAAGGTATCCGCAATATATTGTCAGCTCGATTTGC
AATATTCCAACAATATAGGGGGATTTTTAAAGAAAGAAAATTCCTTTTTA
TGATAGAGCACCTGTTATTTACTCCGTACATTACGGTCTGAAGACTATAT
TGTCAAATTTTGTTCGTCAATATATTGTGTAGTCTAAGTAGCCCTTTAAT
TGTTTTCTTTACCCGTGACCAAGCAAGCACAAAAATAATTATCTTCGTGC
AAGACACTCTGTGCATGGCACACATTCACTCCGAAGGCTATTGCTCCTTA
ATAAAATCTGCCCAAGTTGGCGCGCCGTCTTTTTCATCCCGATTTAGGAT
GGACATTGAATGAGGTTTTTAATGCAATGTTTAGATACAATCATCAACTT
CTAACCGTTAGAGGTCGATGAGTAATTTATAAAAAGCCCTATTGCCATTC
ATTCCATTTTCATTTCCAGGCAAACATATTATCTATAAGAATCAGATATT
TCATTGGGATGATATGGAAATTGTCGATAACGTCATTCGCTCAAACGGTG
ACGGCGAACCAAGTCAAGAAATCTTCGTCAAATGTAAAGTTGAACGTCAA
TATCAAAGTTCACTGGATGGGAAATTCAAACCTAAACATTCGTCAGTAGT
CCAGATTACTAAAAGTAAGATAGCTGTATAATTCTTTGAAAATACATGTG
CTGGGGGTGGAATCAATTCTGGTGCTGGGGGTCGGTTTTTACCAAATATT
CGTTTTTTAAAAGCTCTTGGCATTCAATTTTAATAATCTGATGTAATCAA
CCAAGTTTTTTTCCCGAAGGGCCCAAACGAAGAAAGCCCATCCCCGTCCC
ACAGACCCGACAAAATAATTTGCAACTTGCCCTCGTTGAAAATACACTTA
CACTCATCACTACACTAAGAAATTGCTAGAATTGATAGAATTTTAAATAC
TCGCCTATTAGTAAAAGCAAGATGTTTTCTATCCGAATCTGTATAATGTA
TAATACATCCCTATGTCACAGACCCGCTGGGACACCAGCCCTACTGGAAA
ATTTAGCACGAAAAATTTCGTCCCCGGTGGAAAAATACCCTTGAATTTCA
GTCCCACTGAGAAATTGACTTTGATTTCATCCCCACTCGAAATTACATGT
TTAAAAATTGCTCTCCAAAACCATCCCCACTGGATTTTTTATCCTTGGAA
CAATAGAATTTCTAACCCCATTGGGATTTCGATGGAAATTTTTATCCCCA
CTGAGGAAAGAAGTAACACCGGGGCTATGAGACGGGGATGTTATTTTTTT
TCACGTTATCCCAACTGACTAAAATATCATCACCAGTCTACTTAAGGGCT
CTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCTG
ACTGGTGTAACCAACAAAACTATGGCATGTTATACATTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTGTCACAGACCCGCTGGGACACCAGCCC
TACTGGAAAATTTAGCACGAAAAATTTCGTCCCCGGTGGAAAAATACCCT
TGAATTTCAGTCCCACTGAGAAATTGACTTTGATTTCATCCCCACTCGAA
ATTACATGTTTAAAAATTGCTCTCCAAAACCATCCCCACTGGATTTTTTA
TCCTTGGAACAATAGAATTTCTAACCCCATTGGGATTTCGATGGAAATTT
TTAAGTAACACCGGGGCTATGAGACGGGGATGTTATTTTTTTTCACGTTA
TCCCAACTGACTAAAATATCATCACCAGTCTACTTAAAGGGGTGTAAAAA
TGGAGGCGTTTTGACTAAAACCTTTTTACCCACACGATGCCAGGTCTAAT
ATCTTGGCTATATAATTTTATAATTTTATCCCTTAGCTGAGTATGGAAAA
ATGGAACTATCGATGTCTTTATTCAAAACGTCACTGTTCAACAACAAATA
CATCACAAGGGAATTCCCCATTGTCGTCAACATGCAGGACCTGTTATACG
TGGAACTTTCAATGAACACCACAAGTAAAGAGTTAGCGTTATCTCCACAA
CAATGTTACGCAACAATTACTGAAGATCCTGAGGATGATTTTAGATATTC
CATCTTCAAAGATCGGTAAGTCAATGAGCAGGAGAAAGTTTTGGTACATA
ATTCTCCTAATTCTCCCAGTTCTCCCGCTGGGAACTCAAAGTTTTGGCCA
GAAAAAGTTGGAGAGTTTGTAAAAATTGTAAAATACCTTCCCATTTTTTC
CATCTCAAAAAAGCATCCTTGAAAGTTGCGAAGATGTGAAAAATAGGACT
TTTCCAAACTTTCTCAGCAAAGAACAGCAATCATTTGGATTTGCAAAGTT
TTGGTATTTTGGTGGGAAAATGGGATCTATGGTGTCATAATTATTCCAGA
CTCGACTGAAAATTATGCATATCATCCTCCAATAGCAATCGAATAAAGAA
CTTTCACTTTCGATTGCACGAAAGAATAAATTATAGCGGGCATAAATTAC
GATTTTCCAAGGTCACATTTAATTATTTTCTATTTCGTGCTACCATGTTG
CAACCCATTTTTATAAACATTTACAAAGTTTTGGTTAGGAAAGTTGTAAA
AGTGTGAAAGATTGGAAAAGTGGTAATTTTTTTCCTTCCTGAATATCAGT
AAATTGTGGTGACAGAGTGTTCCATTCATAGATGTAGGCCCAGGTATCAA
TTTAAAATTATATTTCTTTAAAAAATCAATAACATTACTAGCTGGGAGAC
CCGTCTACTCTGTTCGTGTGGTTTCGAAGTACAGCATTTAGCTCAAACTA
ATAATAATATAGAAATAGAGTTGCCGGGTATTTTTGTAGGTGCCAAATCT
GGTCGCAGAATTCTATTGGCTGTTAGACGATTGTTGAAATTACGTGATAT
TATTGTTTTGAATGGAAGTGGCGAATCTGATTGGCTAACCTTATCAACGA
ATTTTTTGGTACGAAATTCAAACCAAATGTAAACAAATTTAAACTGGGTC
ATAAATACCATACTCTCACTGAGTAGCTTCTGATGGGAATTTTGCTTGTG
TAAGTTTGAATAGAGAGTATGGATCTCCAGACTATAACATTACAGTCTGA
TTTGCGCCTTATAGAAGATCATCGGATGTGAATAAAAAGAAAGATCTGAA
AGTTAGGTTTTTATCTAAGGGGTGTCATTAGTGAGGAGTGAGGTGATGTA
TCGATATAGATAAATCACGACGACAAACGAATTTACTTTAGCCTTCTTCG
CGCCACTGCTCTTTTCTACAGGCTATTAGCGCTCCGCAACGCATTACGTC
ATAATTATTACTTTTCACTTTTTTGACATTTGTTACAGAGTTTCTTGCAC
GGAGATAATTATTTTATCGCTTTCCAGTAATTTGCGGATACCTGATCAAT
ATATTGCCTGGCAATATATTGTGTAGTGTATGTAGCCCTTAAGATCGAGT
GCATCTTACCGTTCTACTCAGTCAATCAGGATGTAGACAAATCAAAACAT
ATAAACTCGCAAATACTGTCTGAATCTAGCGTCCGAATCAGACCTTCCAA
AGGGCGTTTTTTTAAGGCGGAATACANAAGCAGTGTCGTAGAAAGCATTT
TTATATAAAGGGGCCTGGAGGAATTTTTGGTATATCTAGAATGCCTAAAA
AATACACACACAAAAAAAGACTTGACTCTAAAAAACAGCACATAAAAGAG
TCTTTAAATGACAAAATAAGGAAAAGCTTACCCTTGAAAAGTTTTTTTGG
GGGGGAGGCTAAGAATCGAGATAAATTTTGTGTTTTTTAGATTCTTCGAG
GGATTCTTTCAAAAGAAATATAGAGTATTTGTGTCAAAATATTTGGAAAT
TGTGATCCTTATAGGAGTTTTTTTGTGATTTTTGTGATTTTTGGACCATT
TCAGAGAGTGTGCTGCTGCATTTCAAATGCCTTAAAGTTTGAACTTTGTA
CTAAGAAGATCTCGAGGTGTTTGGTTTAGCCTGAATTTAATTATTCATCA
CTTNACAGAGACATAACATAATCATAATCTATTGTGCAATTGTTTAAAAA
GTACTCCCTAGTTAACGCGAGCCAGAGTTGTAGTTTTACCCGGAATTTCG
TTTATAATTTCTTTCTCCTTAGGTGTCCGACAGATGATACTTTCAACGTT
GTCCGGAAAACATCACACACGATGCAATTTCAAACAAAGGTTTTTGACTT
CCTCAAGAAAAACAAAGGTAATCAGTAAACAGTTTCAATAGAGTATTCTT
AGGTGCCAAATAAACGGGGGGGGGTTCGAATAAACGGGGGGTTGGAAAAA
ATTTTCAAATCAAATAAACGGGGGTGACCTAATTNTACATCCTTTGTTTA
ACTCCCTTGAAGTTCTTTGTATTAGTTATCTCAAGCTAAGCATCCGTGTT
CACACGTTCACGATTTTATTGTATTTTCAAATTACGTTTTAATGTCATCC
GTAATTCCTCAAGGGAAATTATTAAATGTTTATCAAATGGTTGAAGATAC
GCGAAGATTGTCTTTGTGTGTGTGTATGTGTGATGCATTTTTTGTCATTT
TTTGCGATTTCGATCAATAAATTTTGTCTTTTTGCAATTTTATTTTTCCA
ATCTTCTGTTACATTTTATATGTATTTTATATTAGGTTGATCAAAATTTA
ACTTAACACGATTTTATGTTTTTCCATTTCATTATGGATATTCTTAAATT
TCTGGGGAAAATCATCCTATACAGTGAAGTATTTTTCCAGTATTCTTATG
TAAGTGTGATTTTGTGATTTTGAATGCAATACCTACCTGAAGCATAACGG
GAACAGTTGGTAATTTACAGTTAAGATTGCTCTAGTTTCTGTTGCCAAAT
TCAATGATGGAGATATTCTCAGCATATTCTTATCTTTTTGATTAATTTTA
TTATGAATTATTCTCGTGAAGTATATTCTTTAAAAAAACATTTAGTGGGT
TTACTTTTGTGAATTACAACGAAAACTTTCTCGCACATTTCTTCATTTTC
ATAAAAAATGAAAGTTCTGCATTCGCGGATCTTTAAAACTGTCAAATTTG
TCAGGATCTCCAGAACTTTTAAATTTTTTTATCAAATTTACGGACGTCAC
TTTTCGGCCGAAAAACTGAAATCCTTAAAAAATGCTGACGTCATGATTTA
AAAAATCTTTTTTCCAAATCTTTTTGGTGATTCTATCAAAAGTTATTGAA
ATTTCAATTTTCATGACGTCATCAAAATAGCGCAAATTTGAGGATTTTTG
CGAAATACGCAAAATTCATAAATCAAAAAACATCTGCCTAGACTGAATCT
TATCTTACTTTAGTTATACGCATTGCTTGAGCCCAAAATGATTTGTAACG
TTGCAAGAGTTTTGACCTCCAGGAACCCGTCTCATTCCCCTGGAGATAAT
TTTTGCTGTTCTATTATCAGGTATTTACATGCATTGCACTAGTACAATTT
GTAAGGCTGATTCAAAACATCCTGTCTGTGAATTTGGTTGTGAACCTGCG
CAAACAGATCGAAAGAATCGACGTAGATTGGACCACAAGGAGAAAGCAGC
GAATGAAATTTATACAGTCACCAGTGGGTTTATTGAATTCAACCATGGAG
ATGATGATTTTCTCAATAGCGNAAAAGCACCGAATGAAATTTATACAGTC
ACCAGTGGGTTTATTGAATTCAACCATGGAGATGATAATTTTCTCAATAG
CGTCGAATTAGCAGGTAATGCGACTTTCTTGTTCTCCTTGATATCTTGAT
TCTATTAATTTCAAATTCCTCGATTTAATAGAACTTTAAATAGATTTTAA
GAGTCCACGCAAAATCTTCTCTAGGAGACTATTCTTAAAAGTCGAACCCC
ATGAATTGTAAGACCTTACCCCTTATTTCTTAGAAACTCATCTTTCTATC
TTTATTTGACTTTTTAAGAGATTTCTGTGGATTTTTCATGAATTCCTCTC
CCCGGGCAGCATTCTAAACACGATGTAAAATCAATAAGGTAAGCCTCAGG
CTAGAGTCGAACCTCCTCTGTAGGATTTAAAGCCACTTCTTACATAATTT
GCATGGCTAGCATGGTCTTCATACAAAGACTGTATGGAAAGCAAAATTTA
CCGTGAGAATTTAAAAAATGTAAAACGCGCAAACAAAGAAAGTGCTAAAC
TCAGTCAGTCATCTGAGCTGCGGCGCAAACTTTTTAGGCCTCACTTTTTC
TTACTTCATCAGAAAGGTTGAAGATTCACCTCTAGCCTTCTGCTTGGTGC
TCAATGGGTAAAATTCTCTGCTGGAAAGACTCAATGTAAAGAATCTAATG
CATGCTGTTCTAGGACCCTCTTCCCCTAGCGTAAGAATGCAATTGAAATA
ACCTGAAACTAAAGCCACTACAATGCAATTCTTGACACTCATGACGTAAT
GTTTTTTACGGAAACACAGGAAAATCACCGGGCATTTGCCACCAGTTTCA
TTGTTTAAAATTCAAAATGGGTGGCAAACGCCCGGTCTTTTTCGGGTGTT
TTCGTATAAAAGATTACGTCTTGAATATCAAGAACACATACCAAATACCA
AACACCTCTAAAACACGTCTCTTTTCAGGTACACATCACAACACAAAATA
CAATACACAACAACAACACAACTCATTCACTTCAAGTACAGAATTTCTTT
CCATCTTAGCTGTTCTTATCGCCGTCACTCTTATTGCCGTCGTCAGTATC
ATCGCTGCCGTCTACTTTTACCGACAAAGACGTCAAAATATCAACAATAC
TAGTTCAAGTGACTTAGTGACGTATTTGTAGATTTGCTTGGAGTGCTATA
AATTAAATTAGTGTATAATGCACTTATCACTTTATCGCCACCCAGCTGGC
ACACAACGTTGTTTCAACGTTTATCTAACGTTCACAACGTCCATTTAACG
TTAGATTAACGTTGAAACAACGTTGTGTGCCAGCTGGGCAAAGAGGGCTG
AACTCGATTTTACCAATGGTGGATGGTGGATGGTGGATGGTGGATGGTAC
CAAATGTATGTGAGTATAAATCGATAGACCTTTTGCAGGACGCATCATTT
TAATAAAAACTCTACTCATTAAAACAACGATAGGTATAAGAAAACATTTA
TTAGTACACGCGTTGACTAATTATACTTTCTTTTATCATTGTTATGACGC
TGGAATTTTTCATTATTCAACATCACATCGTTCTTAGGAGTCTGTTTATC
TAAAGTTGGATACAGGAGGTAGGCTATCTTAGTAATGGAGAGTAATGAGT
TTCCATATAAGGTAATACGATGATAAAGTGCACTCTCCTCCATTGGTTAT
AGCCTCCCTCTGTATCCGAGCCTGTCAAGACCATCTAAAAAGAACGACAA
ACCCTAACCCTAACTATCAAAGAACGACATGTTTTGCCGTTCCTCTTTGT
TACGGGAATTAACTGCATGTGGTTTAAACGAACGATAAATTACGCATGCG
TATAAGTCTCTATTTGGGTGGGCTGGAAACATTAGATGAACTAGCTCCTA
GTAAAAGGTCTATGGATGAAAGGCTTTCATAAACATTTGACACGTCGGGA
TGACTTATAGATCCACTGAAAAACCGAATTCAAATGCAGAATATGGTGAC
AAAGATGATTTCAGGCCAATGATGATGAAGGCAAATTTCGCAGCAAAAAT
ACTTGCTTCGTGTCTGGTCAGGGGTGGCGGAGGAGCGGAATCGGCCCTTT
TTTCGGACGGAGTGGCGGAATTTGGCGAAAATTTAGACGGAATTACGGAA
ATTGGGTTCTCTGACGGAGACGGAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_043889	XLOC_043889	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_56	supercontig	scaffold_56:123447..135972 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0667992	0	0	4.33458e-08	0	2.07538e-09	0	0	1.24957e-05	0	1.82271e-10	0.43218	0	0	0.294521	1.48945	1.51801	0	0	3.62887	2.35372	0.362292	0.917902	2.56411	3.63873	0	0.454367	0.625196	0.541173

Blast

[Close]

BLAST of TCONS_00070499 vs. Swiss-Prot (Human)
Match: TECTA (Alpha-tectorin OS=Homo sapiens GN=TECTA PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.871e-16
Identity = 61/211 (28.91%), Postives = 99/211 (46.92%), Query Frame = 1

Query: 3748 GRCGAIVHQTGKHIIYKNQIFHWDDMEIVDNVIRSNGDGEPSQEIFVKCKVERQYQSSLDGKFKPKHSSVVQITKTEYGKMELSMSLFKTSLFNNKYITREFPIVVNMQDLLYVEL-SMNTTSKELALSPQQCYATITEDPEDDFRYSIFKDRCPT--DDTFNVVR-KTSHTMQFQTKVFDFLKKNKGIYMHCTSTICKADSKHPVCEFGC 4368
            G CG IV   G HI+YKN ++  +      N+I      + +  +   C  E   + SLD   KP  S +     T+ G     M+L+K + + + Y  R+  +V+  +D+LYV +  +   +  L L+  +CYAT T D  D  RY I +  C    D+T  +     S T +F   VF F+     +++HC  ++C  DS+   C+  C
Sbjct: 1855 GNCGNIVQSNGTHIMYKNTLWI-ESANNTGNIITR----DRTINVEFSCAYELDIKISLDSVVKPMLSVINLTVPTQEGSFITKMALYKNASYKHPY--RQGEVVLTTRDVLYVGVFVVGADATHLILTLNKCYATPTRDSNDKLRYFIIEGGCQNLKDNTIGIEENAVSLTCRFHVTVFKFIGDYDEVHLHCAVSLC--DSEKYSCKITC 2056

The following BLAST results are available for this feature:

BLAST of TCONS_00070499 vs. Swiss-Prot (Human)

BLAST of TCONS_00070499 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TECTA	8.871e-16	28.91	Alpha-tectorin OS=Homo sapiens GN=TECTA PE=1 SV=3	[more]

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TCONS_00070499 (transcript) - C. hemisphaerica