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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070636 ID=TCONS_00070636|Name=TCONS_00070636|organism=Clytia hemisphaerica|type=transcript|length=1406bp
CCTTGATATAGTTAGTCCTTAAAACATTAATTACTCTTTAAATCAATGta
taaaatctttttcattgTACTTGCATCGTTGGTAAAAAGTTAATTATACA
CTTTAGTCCAACATTTATTTCACTGTCGATCCAAATACTCTGGCAAGTTT
TGAGAATTCGGCAATGATTGTATTCTCCATAATTCCCTGTCAGAATTTTT
AAACGCGTTACGGCCGTGAAGTGTCGTTTCATTGTTGACAAAAACTAAAT
CTCCTTGTTTGTATTGATgccaaaagaaaaatctttcgtcaaaaGCAGCT
TTACGTATCTCTTCTTCCAGCTCTTGTGAGGTTACGTCACTCATCGAGTC
GGGTGAATCTTGAATATTGAATTGATTATGTTGCTTGGCATTTGCGAATT
CTCCTTTTGACCAGCTCTGCCACCACCGTAGAGAATCAACACCATCTTTG
TTTGGGCATTTATGTATAAGTGGGTACGTATATGAGTTATCTTTGCCACC
AAAATAGACTTCATTTCCTTGGTCGTCTTTTTTGACAAGCTGCGTCTCAT
ACCGGAGTTTCGTGTTTTTCCACTCTTCTATGGTGCGTCCGTGTAGCGAT
TGAACCACGGCTGTCGAATCGATAAACGTCGTTGCACCTTCCCTGTCATC
TTCACCTACGGAGTCCGATGAACGGTTAGTGCTACGACAGTAAAGCGCAA
ATACTGGACAAATGAAATCCTCATACTTGTGTTTAGCTTGGTCAACGCCC
ATGTATTTAGGTGGGGCCACCATATCCCAATGAATTGGTATCCCATCATG
ACTATTAACATAGCCAGGCATATCTTTGTCTGGTTTGACTTTATGGATGG
GACCGAAACTCCAGTTCAAGACTCTTTGTTTCATGTGATCTCTATAGTAA
TGTAGAAGGTCTTGTTCGTCTTCAAACTCATTAAAACCTCTAAGCACAAC
AACACCAAATTCATGCGTTAAAGCAAGAATAGTTTCAGGTGTAAAAATAT
CAGGACCAACTTTACTCCTCTCATAAGCTTCAATTACCATTCCACATGAG
TTTCGAGCCATGGAGATCTTCAGATTCAAATAATCACCTTTCAATGGACG
AGACAAGTAAAGTTTAACATAAAAATAAGGTTTGGAACGGTAATAAACCA
TGCTGGTTAGACTGTCTTCCACTTCGCTAGTTTTTCTGTTAGCctctttg
aaatcaattttgaatTCACCGGTCTGTGTATCGAATAGCACCGTATTATG
CCAAGGTGTCCGAAGCTGGGCGCTACCACCGTACAACCTACACTTATTTT
TGAAGAGATCAATAGCAAATTTTCCGGTTTCAGGATGATGCTGGTGGATA
CTGAGACGAACATAATTGTCAATGCATTTTTGTTGGCTAAGGAAGGCATC
TAGTGC Run BLAST on NCBI transcript from alignment at scaffold_57:524699..526399+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070636 ID=TCONS_00070636|Name=TCONS_00070636|organism=Clytia hemisphaerica|type=transcript|length=1701bp|location=Sequence derived from alignment at scaffold_57:524699..526399+ (Clytia hemisphaerica)
CCTTGATATAGTTAGTCCTTAAAACATTAATTACTCTTTAAATCAATGta
taaaatctttttcattgTACTTGCATCGTTGGTAAAAAGTTAATTATACA
CTTTAGTCCAACATTTATTTCACTGTCGATCCAAATACTCTGGCAAGTTT
TGAGAATTCGGCAATGATTGTATTCTCCATAATTCCCTGTCAGAATTTTT
AAACGCGTTACGGCCGTGAAGTGTCGTTTCATTGTTGACAAAAACTAAAT
CTCCTTGTTTGTATTGATgccaaaagaaaaatctttcgtcaaaaGCAGCT
TTACGTATCTCTTCTTCCAGCTCTTGTGAGGTTACGTCACTCATCGAGTC
GGGTGAATCTTGAATATTGAATTGATTATGTTGCTTGGCATTTGCGAATT
CTCCTTTTGACCAGCTCTGCCACCACCGTAGAGAATCAACACCATCTTTG
TTTGGGCATTTATGTATAAGTGGGTACGTATATGAGTTATCTTTGCCACC
AAAATAGACTTCATTTCCTTGGTCGTCTTTTTTGACAAGCTGCGTCTCAT
ACCGGAGTTTCGTGTTTTTCCACTCTTCTATGGTGCGTCCGTGTAGCGAT
TGAACCACGGCTGTCGAATCGATAAACGTCGTTGCACCTTCCCTGTCATC
TTCACCTACGGAGTCCGATGAACGGTTAGTGCTACGACAGTAAAGCGCAA
ATACTGGACAAATGAAATCCTCATACTTGTGTTTAGCTTGGTCAACGCCC
ATGTATTTAGGTGGGGCCACCATATCCCAATGAATTGGTATCCCATCATG
ACTATTAACATAGCCAGGCATATCTTTGTCTGGTTTGACTTTATGGATGG
GACCGAAACTCCAGTTCAAGACTCTTTGTTTCATGTGATCTCTATAGTAA
TGTAGAAGGTCTTGTTCGTCTTCAAACTCATTAAAACCTCTAAGCACAAC
AACACCAAATTCATGCGTTAAAGCAAGAATAGTTTCAGGTGTAAAAATAT
CAGGACCAACTTTACTCCTCTCATAAGCTTCAATTACCATTCCACATGAG
TTTCGAGCCATGGAGATCTTCAGATTCAAATAATCACCTTTCAATGGACG
AGACAAGTAAAGTTTAACATAAAAATAAGGTTTGGAACGGTAATAAACCA
TGCTGGTTAGACTGTCTTCCACTTCGCTAGTTTTTCTGTTAGCctctttg
aaatcaattttgaatTCACCGGTCTGTGTATCGAATAGCACCGTATTATG
CCAAGGTGTNCGTTAAAGCAAGAATAGTTTCAGGTGTAAAAATATCAGGA
CCAACTTTACTCCTCTCATAAGCTTCAATTACCATTCCACATGAGTTTCG
AGCCATGGAGATCTTCAGATTCAAATAATCACCTTTCAATGGACGAGACA
AGTAAAGCTTAACATAAAAATAAGGTTTGGAACGGTAATAAACCATGCTG
GTTAGACTGTCTTCCACTTCGCTAGTTTTTCTGTTAGCctctttgaaatc
aattttgaatTCACCGGTCCGTGTATCGAATAACACCGTATTATGCCAAG
GTGTCCGAAGCTGGGCGCTACCACCGTACAACCTACACTTATTTTTGAAG
AGATCAATAGCAAATTTTCCGGTTTCAGGATGATGCTGGTGGATACTGAG
ACGAACATAATTGTCAATGCATTTTTGTTGGCTAAGGAAGGCATCTAGTG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070636-exon-scaffold_57-1491911889:524699..525953 | TCONS_00070636-exon-scaffold_57-1491911889:524699..525953 | Clytia hemisphaerica | exon |
| TCONS_00070636-exon-scaffold_57-1510915933:524699..525953 | TCONS_00070636-exon-scaffold_57-1510915933:524699..525953 | Clytia hemisphaerica | exon |
| TCONS_00070636-exon-scaffold_57-1575043694:524699..525953 | TCONS_00070636-exon-scaffold_57-1575043694:524699..525953 | Clytia hemisphaerica | exon |
| TCONS_00070636-exon-scaffold_57-1491911889:526249..526399 | TCONS_00070636-exon-scaffold_57-1491911889:526249..526399 | Clytia hemisphaerica | exon |
| TCONS_00070636-exon-scaffold_57-1510915933:526249..526399 | TCONS_00070636-exon-scaffold_57-1510915933:526249..526399 | Clytia hemisphaerica | exon |
| TCONS_00070636-exon-scaffold_57-1575043694:526249..526399 | TCONS_00070636-exon-scaffold_57-1575043694:526249..526399 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:524699..526399 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
The following BLAST results are available for this feature:
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