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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070706 ID=TCONS_00070706|Name=TCONS_00070706|organism=Clytia hemisphaerica|type=transcript|length=1164bp
cccccattaatTCACATcacaaattattttaaaaacaaaagggGCTTTCC
TGTTGTTTGGTGGTTGACAACGGGATATAATTAATACACCGTTTGGAGCC
GAGTCAAAAATTTAGTATAAAAGGAGCAAAAAGTTTCCTAGTGAATCATT
CACAAAGCAACTAGAATCAAAGAAACTCGCAACAAACAATCTCTAACCAC
AAAAACGATGGCTTCTGCAGGCGCACTTCTCTTAAATCAAAGAGTCCCAT
TCATCATGGAGCTAGACGCTGAAGTTAACGGAATCAGATTTGCAGTTCGT
GGCAAGGGAACAGGGGACGCAACAACTGGCATCATCGACACCAAATTCGT
ATGTACCACTGGTAAATTGCCAGTACCGTGGGCTTCAATCTCAAGCACAA
TGGCATATGGAGCTTTaTGTTTTGCCAAATATCCAGACAGCGTTAAAGAT
TTCTTTAAATCAGCAATGCCAGATGGTTATATCCAAGAAAGGACCATCAG
CTTCGAAAATGATGGCGCTTACAAAGTTCGTGGTGTAGTTACTTTTGAAC
ATGGTTCTATTTACAATCGCGTCACACTTAAAGGAGAAGGATTCAAAAAA
GATGGACTCATCCTTCAAAAACAATACGAATTTTGCTGTCCGAATAGTGC
AGTTTACGTTTTGCCGGACAAAGAAAACAACGGACTCCGAGTTGTTTATA
ACACAGTAAGTTCTTCTTTTTACGAgatatttgttttatttcttttgtcG
ATATTGAATTCAAACAAATAATTCTTGATAGCTAGAAACTATACCCAGTA
GCACCATTACCCTAttggaaaatttggctaaaatttcatCCACGGGGGAA
AACCCCACAACGTCAGTCCCACTTTCaatttgatttcatccctatttgaa
attcaatacactcttctcgagatgcataaatttattgttgtcctcgtttt
caaacagatttcattgctataaaattacatattcacaatgataattgtgt
tgtttacacctcatgagacattttaaatttcaagtacttttgttttagag
ttaatttttgccttttgggaatataaattgatttaaatgtataatttcat
agcaatgaaatctgtttgaaaacgaggacaacaataaatttatgcatctc
gagaagagtgtatt Run BLAST on NCBI protein sequence of TCONS_00070706-protein >TCONS_00070706-protein ID=TCONS_00070706-protein|Name=TCONS_00070706-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MASAGALLLNQRVPFIMELDAEVNGIRFAVRGKGTGDATTGIIDTKFVCT
TGKLPVPWASISSTMAYGALCFAKYPDSVKDFFKSAMPDGYIQERTISFE
NDGAYKVRGVVTFEHGSIYNRVTLKGEGFKKDGLILQKQYEFCCPNSAVY
VLPDKENNGLRVVYNTVSSSFYEIFVLFLLSILNSNK Run BLAST on NCBI transcript from alignment at scaffold_57:785331..787349- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070706 ID=TCONS_00070706|Name=TCONS_00070706|organism=Clytia hemisphaerica|type=transcript|length=2019bp|location=Sequence derived from alignment at scaffold_57:785331..787349- (Clytia hemisphaerica)
CCCCCATTAATTCACATCACAAATTATTTTAAAAACAAAAGGGGCTTTCC
TGTTGTTTGGTGGTTGACAACGGGATATAATTAATACACCGTTTGGAGCC
GAGTCAAAAATTTAGTATAAAAGGAGCAAAAAGTTTCCTAGTGAATCATT
CACAAAGCAACTAGAATCAAAGAAACTCGCAACAAACAATCTCTAACCAC
AAAAACGATGGCTTCTGCAGGCGCACTTCTCTTAAATCAAAGAGTCCCAT
TCATCATGGAGCTAGACGCTGAAGTTAACGGAATCAGATTTGCAGTTCGT
GGCAAGGGAACAGGGGACGCAACAACTGGCATCATCGACACCAAATTCGT
ATGTACCACTGGTAAATTGCCAGTACCGTGGGCTTCAATCTCAAGCACAA
TGGCATATGGAGCTTTGTAAGTATTTCATACTTTTTAACATAATAACCAG
AGGACTACAATCAAACCCTGGTAAAAATTCTTGATAAGTTCTTGATAAGA
TCTTATCAAGAAACTTTGCAAGTTCTTGTTCAGTTTCTTACTACGAACGT
GCCAAGATCCTTTNACCAGAGGACTACAATCAAAAGTTCTCAGTTCAAAT
CCTCGTTCAATTCATAGATATCAAACCCTGGTCATCGTAGACCTTCTGAA
ATCACGATTGCTATGATACCCCTATCCTGGGTACACGTTGTTTTTTTTAA
GAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCAGCCTTT
TAAGCCTTAAATGTTTCTTACATGTTCTTCTAAACTTTTTGACATAATCA
GCCTATTTTTCATGTTTTGATTGAAAGGTTCTTAAAAAAACGAATTAAAA
ATGTCATTTTTTCATTTTCAGCCTTAGCATGTTTCTTAAATGTTTCTTAG
TTTTTAGGCATTTTGAGCCTCATGTTTCTTAAAAGTGTGTTTATTAAAAT
AAACGTGTAGATCCATAATATTTGCAACGGGGGGGGGGGACCGTCCTTTC
TTTAAAGTTCTATTAGCCTATTTCATAGGATTCGTGTTTTTAGTACATGA
TACTTTTCTCCGTAACTATTTAGTAATCAACTTTAAAAAAATAGAATGTA
ACGTAACAAATGTGTGAATCCTATGAAATAGGATAGCACCGATTTCTTAC
TCAAAAAGGTCGTCTCAGATGTGAAAAAATGGAGCATTGAGTGTATCAGC
GACGTTCTGCCTTCTGTATCAATTTTATCAGTTTCTATATCATTTTTAAT
CGATTCTTTTTTCATATTTAGATGTTTTGCCAAATATCCAGACAGCGTTA
AAGATTTCTTTAAATCAGCAATGCCAGATGGTTATATCCAAGAAAGGACC
ATCAGCTTCGAAAATGATGGCGCTTACAAAGTTCGTGGTGTAGTTACTTT
TGAACATGGTTCTATTTACAATCGCGTCACACTTAAAGGAGAAGGATTCA
AAAAAGATGGACTCATCCTTCAAAAACAATACGAATTTTGCTGTCCGAAT
AGTGCAGTTTACGTTTTGCCGGACAAAGAAAACAACGGACTCCGAGTTGT
TTATAACACAGTAAGTTCTTCTTTTTACGAGATATTTGTTTTATTTCTTT
TGTCGATATTGAATTCAAACAAATAATTCTTGATAGCTAGAAACTATACC
CAGTAGCACCATTACCCTATTGGAAAATTTGGCTAAAATTTCATCCACGG
GGGAAAACCCCACAACGTCAGTCCCACTTTCAATTTGATTTCATCCCTAT
TTGAAATTCAATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTC
GTTTTCAAACAGATTTCATTGCTATAAAATTACATATTCACAATGATAAT
TGTGTTGTTTACACCTCATGAGACATTTTAAATTTCAAGTACTTTTGTTT
TAGAGTTAATTTTTGCCTTTTGGGAATATAAATTGATTTAAATGTATAAT
TTCATAGCAATGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGC
ATCTCGAGAAGAGTGTATT Coding sequence (CDS) from alignment at scaffold_57:785331..787349- >TCONS_00070706 ID=TCONS_00070706|Name=TCONS_00070706|organism=Clytia hemisphaerica|type=CDS|length=1128bp|location=Sequence derived from alignment at scaffold_57:785331..787349- (Clytia hemisphaerica)
ATGTTTTGCCAAATATCCAGACAGCGTTAAAGATTTCTTTAAATCAGCAA
TGCCAGATGGTTATATCCAAGAAAGGACCATCAGCTTCGAAAATGATGGC
GCTTACAAAGTTCGTGGTGTAGTTACTTTTGAACATGGTTCTATTTACAA
TCGCGTCACACTTAAAGGAGAAGGATTCAAAAAAGATGGACTCATCCTTC
AAAAACAATACGAATTTTGCTGTCCGAATAGTGCAGTTTACGTTTTGCCG
GACAAAGAAAACAACGGACTCCGAGTTGTTTATAACACAGTAAGTTCTTC
TTTTTACGAGATATTTGTTTTATTTCTTTTGTCGATATTGAATTCAAACA
AATAAATGGCTTCTGCAGGCGCACTTCTCTTAAATCAAAGAGTCCCATTC
ATCATGGAGCTAGACGCTGAAGTTAACGGAATCAGATTTGCAGTTCGTGG
CAAGGGAACAGGGGACGCAACAACTGGCATCATCGACACCAAATTCGTAT
GTACCACTGGTAAATTGCCAGTACCGTGGGCTTCAATCTCAAGCACAATG
GCATATGGAGCTTTATGTTTTGCCAAATATCCAGACAGCGTTAAAGATTT
CTTTAAATCAGCAATGCCAGATGGTTATATCCAAGAAAGGACCATCAGCT
TCGAAAATGATGGCGCTTACAAAGTTCGTGGTGTAGTTACTTTTGAACAT
GGTTCTATTTACAATCGCGTCACACTTAAAGGAGAAGGATTCAAAAAAGA
TGGACTCATCCTTCAAAAACAATACGAATTTTGCTGTCCGAATAGTGCAG
TTTACGTTTTGCCGGACAAAGAAAACAACGGACTCCGAGTTGTTTATAAC
ACAGTAAGTTCTTCTTTTTACGAGATATTTGTTTTATTTCTTTTGTCGAT
ATTGAATTCAAACAAATAAATGGCTTCTGCAGGCGCACTTCTCTTAAATC
AAAGAGTCCCATTCATCATGGAGCTAGACGCTGAAGTTAACGGAATCAGA
TTTGCAGTTCGTGGCAAGGGAACAGGGGACGCAACAACTGGCATCATCGA
CACCAAATTCGTATGTACCACTGGTAAATTGCCAGTACCGTGGGCTTCAA
TCTCAAGCACAATGGCATATGGAGCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070706-exon-scaffold_57-1575043694:786934..787349 | TCONS_00070706-exon-scaffold_57-1575043694:786934..787349 | Clytia hemisphaerica | exon |
| TCONS_00070706-exon-scaffold_57-1575043694:785331..786078 | TCONS_00070706-exon-scaffold_57-1575043694:785331..786078 | Clytia hemisphaerica | exon |
| TCONS_00070706-exon-scaffold_57-1510915933:786934..787349 | TCONS_00070706-exon-scaffold_57-1510915933:786934..787349 | Clytia hemisphaerica | exon |
| TCONS_00070706-exon-scaffold_57-1510915933:785331..786078 | TCONS_00070706-exon-scaffold_57-1510915933:785331..786078 | Clytia hemisphaerica | exon |
| TCONS_00070706-exon-scaffold_57-1491911889:786934..787349 | TCONS_00070706-exon-scaffold_57-1491911889:786934..787349 | Clytia hemisphaerica | exon |
| TCONS_00070706-exon-scaffold_57-1491911889:785331..786078 | TCONS_00070706-exon-scaffold_57-1491911889:785331..786078 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:785331..787349 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006091 | generation of precursor metabolites and energy |
| GO:0008218 | bioluminescence |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008218 |
bioluminescence |
| biological_process |
GO:0006091 |
generation of precursor metabolites and energy |
Blast
The following BLAST results are available for this feature:
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