TCONS_00070754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070754
Unique NameTCONS_00070754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length615

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070754 ID=TCONS_00070754|Name=TCONS_00070754|organism=Clytia hemisphaerica|type=transcript|length=615bp
aaaaaagaaagaaaattttataatttatattACAAATAACAGTTGAGTTA
CATATACATACAGTTTGAAACTAGAATGTGAATAATTGTATAGAATTTGT
AGGCACTGGAGTTTTTTTCTTATGTAATCACACTTTCCCAGTGTACGAAG
ATGGGAAATCTTCTTGTAAAGTATGCAAGATTGTAGGAAATGAGACTTGG
TTGGAGATACTGATTTgagtttctattgttttgaatgcTATCACAATTAT
TTGACTTGTATTTCATGGGTTGGGCTGGTATTTCACATATCCTGCTAAct
tattttgatgagaaaattgTAACGAGCAAAAATTATTATTACATATGAAC
TTTATATATTAAAATAGTAGATTTTTAGACTACTACGAGGTAAATCTTTC
CATCAAATGATGTATATAATAAGCTATTTCATTGGAATACTTTTCATAAT
AGTGATGCTCTAAAATAAGATATTATTACTTACACAACCTTAAATGAGGT
TGCTTAGTTTCCCAAAAGAAAGTATTAGTtgcatatttttagaaaaataa
atgaataacAAGAGAAAAATATACTATATTTTAGTCCTTTGTAATTGATA
TGATCTCTGGCTAAA
Run BLAST on NCBI

transcript from alignment at scaffold_57:746491..747105

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070754 ID=TCONS_00070754|Name=TCONS_00070754|organism=Clytia hemisphaerica|type=transcript|length=615bp|location=Sequence derived from alignment at scaffold_57:746491..747105 (Clytia hemisphaerica)
TTTAGCCAGAGATCATATCAATTACAAAGGACTAAAATATAGTATATTTT
TCTCTTgttattcatttatttttctaaaaatatgcaACTAATACTTTCTT
TTGGGAAACTAAGCAACCTCATTTAAGGTTGTGTAAGTAATAATATCTTA
TTTTAGAGCATCACTATTATGAAAAGTATTCCAATGAAATAGCTTATTAT
ATACATCATTTGATGGAAAGATTTACCTCGTAGTAGTCTAAAAATCTACT
ATTTTAATATATAAAGTTCATATGTAATAATAATTTTTGCTCGTTAcaat
tttctcatcaaaataagTTAGCAGGATATGTGAAATACCAGCCCAACCCA
TGAAATACAAGTCAAATAATTGTGATAgcattcaaaacaatagaaactcA
AATCAGTATCTCCAACCAAGTCTCATTTCCTACAATCTTGCATACTTTAC
AAGAAGATTTCCCATCTTCGTACACTGGGAAAGTGTGATTACATAAGAAA
AAAACTCCAGTGCCTACAAATTCTATACAATTATTCACATTCTAGTTTCA
AACTGTATGTATATGTAACTCAACTGTTATTTGTaatataaattataaaa
ttttctttctttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044030XLOC_044030Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070754-exon-scaffold_57-1491911889:746491..747105TCONS_00070754-exon-scaffold_57-1491911889:746491..747105Clytia hemisphaericaexon
TCONS_00070754-exon-scaffold_57-1510915933:746491..747105TCONS_00070754-exon-scaffold_57-1510915933:746491..747105Clytia hemisphaericaexon
TCONS_00070754-exon-scaffold_57-1575043694:746491..747105TCONS_00070754-exon-scaffold_57-1575043694:746491..747105Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:746491..747105 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.436918	0.596489	0.494701	0.483988	0	0.0931201	0.112345	0.315529	0.147273	0.0912107	0.531188	0.465576	0.464929	0.422479	0.496193	0.159747	0.983978	0.201709	0.557344	1.06924	1.68975	1.2363	0.300577	1.18416	0.37528	0	1.55766	3.06901	5.91633	5.4349
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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