TCONS_00070846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070846
Unique NameTCONS_00070846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070846 ID=TCONS_00070846|Name=TCONS_00070846|organism=Clytia hemisphaerica|type=transcript|length=5360bp
CTTTACAGTATTATACATTACATTGAATGGTAAAACGATTAGAATTTCAT
AATTCTCTGGTGAAAGTTCATTTGTTGCATGGGATGAGGTGGGACGATAT
CTGGGAAAGTAGCTAGTGACCACTGGCCTGTAGATTCATTTTAGACtatg
tattgatttgattccaGGCATCATTCACTGAGGAAATGGAGTCACTTTAG
CTTCTTTTCTATCAGTTCTTTTCTCTTGTTAGAGCTACATCTGGTTtgga
atatttgaaaattattgaaattcaaatttttgcttaaaacaaaaaagaaa
atagacaTTATGGTCTGAAGGTGATATTATAGATacttttttgatacttt
ttaaagGCTTCTTTGTTCATCTcaacaatcatccaatttgagaAATCCGA
TGATGGACCATGACTTTGATGCTATTTGAAAGAGCTCTCATAAGAGGAAG
GTAATTTGGCAGCAGTGGCTCGTCCGGTagtgaattgagaaaatggtcca
attgatgtttaaaattacTTTTGGAGCAGTTTTTGAGGTTACAGATGGAT
TGTGGGAGGGCATTAAATAATCTGGGACCTTCTTCTGACAGGCAACAGGG
AGTCTCCCCATATGTTTTTTTTCCTTATGTTCaccttttttagattttct
acCCAGTCCCTGGTTGTCGTCCTGCTTTCTTCCAAGAGATTTCCCAGCAC
CTCACAAATAAGGAACCCTGGTTTGTGTCACGTATTTGATTTCTTGGATC
TATGGCTACTAAACCAACGGATGAAATTGAACCAGAAGGGGAACCAAATG
AAGACGTACAGATTTGGAAACAAATAGTAACAGAGCTATCACTTCAAGCA
CCGGATCCTCAGATCAAATCTTGTCTTCAATTGTACAATCCAGAGAAACC
TACAAAATCTATTATCGCTAAACTgaccaaaagtttcaaaaaagacaCAA
TCAACAATTCACGACACACTTAACTTCCTGTCAAAACAGGAAGTTGAATC
TGCTAACAAGAATGAACTTGTCCAAAAGCTTTGCCTCAaagtcaaaagct
tttttccAGATGTATGCCAGATCTGCAACATGTCCTATGTTATCAAACTC
AATGATGAACCCTCTCTCCAGTGTACGTGCACCATGTGGTCAAGAAGTAC
ACCGAGAGTGCTACctgaatattttgaaagataTGAACCTAGTTGATCAT
AATGAGGCAATACGTGAtagacttttcaaaattcaatgtcaATCCTGCCA
AGAAAACACTGTGTCTTTCACCCATGATAGTAACACACCAAATCCACCAA
GATCAACTGAATCCCAGGAAAAATCTACTTGGAGTGTAGTAGATGAGGAT
TATGAGATCAATGCACCAATGACAGAAGACGATACTTCCAACACATTAAA
CCAAACAGCTCGCGGACCACCAAATGAAATCAACTTGAACAACAGCAACC
AAGAGCAACAACAATCACGCCCAATATCCTGGATCAAGATCTCAGACCAA
ATCAAAGACAAATGATCAAATATGTCACataaaagaaaaatgtaaatatg
AACTGAAAGGCCGAGACTGTCAATTTATCCATCCTAAAGCCTgaacaaaa
ttgctcaaatatgGCAACAAACAACCAAGAGGCTGCAACCTAGGTACCAA
GTGCCAAAGCTTCCACCTGAGGATGTGCTCATCATCTATTACAAGAGGGG
AATGCTTTAATCTTGACTGCAAACTCACGCATGTTTTAAAGGGAACCAAA
CGACAtcagaaaaagcaaaacaatcgtAATGATGAACCTCAAGATTTTCT
CACAATCCTGGACAACTTTCGCACAGGAATAATCTCTCTTGTGAACAATT
GTTTCAGCAACCAAAACCAACAAATACAATTCAGGAACCACAATTTGTCA
CATCAACCTCAACAAACATTCAATCATCAGCATCCCCTACATCATCTACC
ACCCAAGCACCCAACAATGGAACCAACATTTCCAAGAAATCTACTGGGAC
AGTGACTGCCCTTACTGATGCTGACCCGACTACCAAAACTACTTCTAAAC
CTACACTGAATATGTTTTCATTTGTCAATATACAAGGACCTTGCCCACAA
ACAAAACCTTCATCTGTACCCTACCTCAAAGATCTTACAAACAGCTCAAA
CCAactgtttttaggcttttaacCGAAACCTGGTTAACGGACAATCTCAA
AAAAGGAGAACTTGAGAttgaaaattacaattttttaaagaaaaacagag
ACAGAGTAAAATCGAAATATGGCAGAGCAAGCAGAGGCGTTGCATTTTAT
GTGCATAATGACATTGCACTATTCTTCGAGCCCATTTTGGAATTCTCGAA
CGGAGTAAATGAAGCATtgatgcttttatcaaaaaaatttaatattcttC
TGTGTTATCTACAGACAACCCCACAATCCACAAACCTGAAGCACCTGAAT
TACAAGAACTCCTTTCTGCAATGATAGCAAAAATTGATAGTAttaccatg
aaggtaataaagatacagatggagagaaaacgtctcggtaatgacctaaa
tggtcgttgaaatcttttataaatctattcaaagcggcctttctttgatg
taccatcattggaagcaaaaaacatcaatttataactttaaaaGAACAGA
AATAGGCCGGTacaatgattttgaaaaatttaattttgcgagaaatctta
gttaaaatgcgattcgaaatagtttcaactgatttaaggataaaagaata
tattaattttataaggatatatttttgggctggcattttgtgaacattga
gagtcgcatcacattatcattgaaagtttcttatcttgaaatcttcacgt
ctaagtggacagcggttttcatactctgacaaaatgatcgatacaaggtt
cttaattgtaacacgtaattctttttcaaatctatcaatggctttatggg
cagcttcccctagaagtttagagtattgtgcttattatgtgaagtttttt
tcaatttttcatgacaaggctattatatTTCAATATACTTGTTAAAAATG
TAATGTCTTTTCATTCATCTTTAATATTCTCACGAGTATACcgaaaatta
atcatcttattcccaaagcaaccaaacagctgtttgcttccgatgataaa
tcagaatagaaaaaaggcattgactctccatctatctttattaccttcat
ggtatTACTGATTGTACACCTGACATATACATCCTTGGGGATTTTAACAT
ACCACACGCGCCTCTTAATGACGAGACTTCAACCCCAACACGAAATTGCA
ATAAACAGCTTCTGGACGtttttttgtgatgacgtcattattttcatata
taatttaagtgtcactttgtcaatatttggAGTCGATGATTTGTCcttga
aattttctaaatagcatgttttgtATACAACATTTCCTTATTGCaaataa
tattttattaaaCGTTTTTATAAATTGCATGTAACAGTTACAGTTACAGT
ACAGTTTTGACCTGTGTCAATAGCCTGTGACCTGTCGACTCGAATTAGCC
GACTTTTTTTGCAGAGataaataaatcaaaacagaaTGGCTTTAGAAATC
AAGAAAGTTTTAATCAGTGATAAAGTGGATTCTAGTTGTCAAACAGTGCT
TGAAGAAAACAGCATTGAAGTGGATTACAAACCTGGCCTGTCAAAAGATG
AACTCAAAGCTATCATCAAGgattACGACGGTCTTATAGTCAGATCAGCC
ACCAAAGTGACGCAAGATGTTTATGATTGTGCTGAAAGGTTGAAGATTAT
TGGCAGAGCTGGTACTGGTGTGGATAATATTGACCAAATTTCTGCGTCAG
CAAAAGGAGTTCTTGTCATGAACACACCGGGTGGAAATACACTGAGTGCA
GCAGAACACACCTGCGCCATGATCTCTGCTCTTGCAAGACACATTGGTCA
AGGTTATGCTTCAATGTTGGAAGGAAAATGGGAGAGATCTAAGTTTATGG
GATGTGAACTCGGTGGAAAAACACTGGCTATTATCGGGCTTGGTCGGATC
GGACGTGAAGTGGCTTCAAGAATGCAATCTTACGGAATGAAGACGGTGGG
TTACGATCCTTTGGTTTCACCAGAAGAAGCTGCTACATTTGGTGTGGAGt
atttacaattaaaaaatatttggcCCATCGCTGACTTTGTCACAGTTCAT
GTACCTCTCATCAAGCCAACACGTGGGATGATCAACGCATCGGTGTTCGA
AGTTTGCAAACCCTCCATGAAAGTGATCAATGTTGCACGTGGTGGAATCA
TTGATGAAAAGGATCTCCTCAACGCATTGAATGCTGGGAAATGTGGGGGA
GCAGCACTTGATGTCTTCGAAACTGAACCACCTAAAGAGGGCAGTGTCAG
CATGGAGTTAGTGAAACATCCTAAGACCCTATGCACACCACATTTGGGAG
CGAGTACGACAGAAGCACAGTTGCGCGTTGCTAAGGAGATTGCAGAACAA
TTTGTGGATGCGGTCAATGGGAAACCCATGGTCGGCTTGGTCAACGCACC
AGCTTTATCGCAATTGGCCAACCCTTTGTACGCACCTTGGGTGGAACTAG
CTCAGAAACTCGGCTCCCTAGCCTCCAATCTCAGTGATTCAGCAAATTTG
ACTTTGCATTTGGATGGTGATGAATTGAAACCAGCCACCAGGCTATTGAA
CACTGCGCTTTGTTTTGGACTTGCTAAAGCTAAAGGATTGGACTGCAATA
TGATCAGTGCTGTCAGTCTTCTCAAAGAGAAAAACATAGTGGTTGTCAAC
TCACCAACACCCAAAGATCTCGCTTACTCTGCTCTCTCTGTTTCAACAAG
CGAAAACTCATGGCTCGTCACCGGCTTTCTGAGCAGAGGAAGACCCTGCA
TTGGAACTCTCCAAAATACTGAGCTCGCTAACCCAGTCGTTTTAGAGAGC
GGTTTGGTCTATGCAGTTTCCGACTCATCAGAGAAAGAACTTCTGCTGAC
TTCAGCAGAAATGGGCGTTTCTTCAGTGAGTCTATCACGGAATGGAAACC
GGGTGGTTTTTGTCGCAAGTGTCGCAGAGAAACCGGCCAACGAACTATTC
AAATTCATACAATTCTAGggagtatttttgaaattttaggttagatagga
aatatttttcaaaagatatggCGCATATGTCTGAAGTATAGGGAGCTTCT
Tcgtcatttcaaatttttgtggtttgtaaattttctttacatatttgaat
ttttttattttattctgtcAACTAGGATTTTTCCCGATATTTATAAAACT
GTAGCTCATAACCGAATCAAAAATTACGATATTAATATTCAAGTATTCCT
TTGTTCCTTA
Run BLAST on NCBI

transcript from alignment at scaffold_58:827386..836751+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070846 ID=TCONS_00070846|Name=TCONS_00070846|organism=Clytia hemisphaerica|type=transcript|length=9366bp|location=Sequence derived from alignment at scaffold_58:827386..836751+ (Clytia hemisphaerica)
CTTTACAGTATTATACATTACATTGAATGGTAAAACGATTAGAATTTCAT
AATTCTCTGGTGAAAGTTCATTTGTTGCATGGGATGAGGTGGGACGATAT
CTGGGAAAGTAGCTAGTGACCACTGGCCTGTAGATTCATTTTAGACtatg
tattgatttgattccaGGCATCATTCACTGAGGAAATGGAGTCACTTTAG
CTTCTTTTCTATCAGTTCTTTTCTCTTGTTAGAGCTACATCTGGTTtgga
atatttgaaaattattgaaattcaaatttttgcttaaaacaaaaaagaaa
atagacaTTATGGTCTGAAGGTGATATTATAGATacttttttgatacttt
ttaaagGCTTCTTTGTTCATCTcaacaatcatccaatttgagaAATCCGA
TGATGGACCATGACTTTGATGCTATTTGAAAGAGCTCTCATAAGAGGAAG
GTAATTTGGCAGCAGTGGCTCGTCCGGTagtgaattgagaaaatggtcca
attgatgtttaaaattacTTTTGGAGCAGTTTTTGAGGTTACAGATGGAT
TGTGGGAGGGCATTAAATAATCTGGGACCTTCTTCTGACAGGCAACAGGG
AGTCTCCCCATATGTTTTTTTTCCTTATGTTCaccttttttagattttct
acCCAGTCCCTGGTTGTCGTCCTGCTTTCTTCCAAGAGATTTCCCAGCAC
CTCACAAATAAGGAACCCTGGTTTGTGTCACGTATTTGATTTCTTGGATC
TATGGCTACTAAACCAACGGATGAAATTGAACCAGAAGGGGAACCAAATG
AAGACGTACAGATTTGGAAACAAATAGTAACAGAGCTATCACTTCAAGCA
CCGGATCCTCAGATCAAATCTTGTCTTCAATTGTACAATCCAGAGAAACC
TACAAAATCTATTATCGCTAAACTgaccaaaagtttcaaaaaagacaCAA
TCAACAATTCACGACACACTTAACTTCCTGTCAAAACAGGAAGTTGAATC
TGCTAACAAGAATGAACTTGTCCAAAAGCTTTGCCTCAaagtcaaaagct
tttttccAGATGTATGCCAGATCTGCAACATGTCCTATGTTATCAAACTC
AATGATGAACCCTCTCTCCAGTGTACGTGCACCATGTGGTCAAGAAGTAC
ACCGAGAGTGCTACctgaatattttgaaagataTGAACCTAGTTGATCAT
AATGAGGCAATACGTGAtagacttttcaaaattcaatgtcaATCCTGCCA
AGAAAACACTGTGTCTTTCACCCATGATAGTAACACACCAAATCCACCAA
GATCAACTGAATCCCAGGAAAAATCTACTTGGAGTGTAGTAGATGAGGAT
TATGAGATCAATGCACCAATGACAGAAGACGATACTTCCAACACATTAAA
CCAAACAGCTCGCGGACCACCAAATGAAATCAACTTGAACAACAGCAACC
AAGAGCAACAACAATCACGCCCAATATCCTGGATCAAGATCTCAGACCAA
ATCAAAGACAAATGATCAAATATGTCACataaaagaaaaatgtaaatatg
AACTGAAAGGCCGAGACTGTCAATTTATCCATCCTAAAGCCTgaacaaaa
ttgctcaaatatgGCAACAAACAACCAAGAGGCTGCAACCTAGGTACCAA
GTGCCAAAGCTTCCACCTGAGGATGTGCTCATCATCTATTACAAGAGGGG
AATGCTTTAATCTTGACTGCAAACTCACGCATGTTTTAAAGGGAACCAAA
CGACAtcagaaaaagcaaaacaatcgtAATGATGAACCTCAAGATTTTCT
CACAATCCTGGACAACTTTCGCACAGGAATAATCTCTCTTGTGAACAATT
GTTTCAGCAACCAAAACCAACAAATACAATTCAGGAACCACAATTTGTCA
CATCAACCTCAACAAACATTCAATCATCAGCATCCCCTACATCATCTACC
ACCCAAGCACCCAACAATGGAACCAACATTTCCAAGAAATCTACTGGGAC
AGTGACTGCCCTTACTGATGCTGACCCGACTACCAAAACTACTTCTAAAC
CTACACTGAATATGTTTTCATTTGTCAATATACAAGGACCTTGCCCACAA
ACAAAACCTTCATCTGTACCCTACCTCAAAGATCTTACAAACAGCTCAAA
CCAactgtttttaggcttttaacCGAAACCTGGTTAACGGACAATCTCAA
AAAAGGAGAACTTGAGAttgaaaattacaattttttaaagaaaaacagag
ACAGAGTAAAATCGAAATATGGCAGAGCAAGCAGAGGCGTTGCATTTTAT
GTGCATAATGACATTGCACTATTCTTCGAGCCCATTTTGGAATTCTCGAA
CGGAGTAAATGAAGCATtgatgcttttatcaaaaaaatttaatattcttC
TGTGTTATCTACAGACAACCCCACAATCCACAAACCTGAAGCACCTGAAT
TACAAGAACTCCTTTCTGCAATGATAGCAAAAATTGATAGTAttaccatg
aaggtaataaagatacagatggagagaaaacgtctcggtaatgacctaaa
tggtcgttgaaatcttttataaatctattcaaagcggcctttctttgatg
taccatcattggaagcaaaaaacatcaatttataactttaaaaGAACAGA
AATAGGCCGGTacaatgattttgaaaaatttaattttgcgagaaatctta
gttaaaatgcgattcgaaatagtttcaactgatttaaggataaaagaata
tattaattttataaggatatatttttgggctggcattttgtgaacattga
gagtcgcatcacattatcattgaaagtttcttatcttgaaatcttcacgt
ctaagtggacagcggttttcatactctgacaaaatgatcgatacaaggtt
cttaattgtaacacgtaattctttttcaaatctatcaatggctttatggg
cagcttcccctagaagtttagagtattgtgcttattatgtgaagtttttt
tcaatttttcatgacaaggctattatatTTCAATATACTTGTTAAAAATG
TAATGTCTTTTCATTCATCTTTAATATTCTCACGAGTATACcgaaaatta
atcatcttattcccaaagcaaccaaacagctgtttgcttccgatgataaa
tcagaatagaaaaaaggcattgactctccatctatctttattaccttcat
ggtatTACTGATTGTACACCTGACATATACATCCTTGGGGATTTTAACAT
ACCACACGCGCCTCTTAATGACGAGACTTCAACCCCAACACGAAATTGCA
ATAAACAGCTTCTGGACGtttttttgtgatgacgtcattattttcatata
taatttaagtgtcactttgtcaatatttggAGTCGATGATTTGTCcttga
aattttctaaatagcatgttttgtATACAACATTTCCTTATTGCaaataa
tattttattaaaCGTTTTTATAAATTGCATGTAACAGTTACAGTTACAGT
ACAGTTTTGACCTGTGTCAATAGCCTGTGACCTGTCGACTCGAATTAGCC
GACTTTTTTTGCAGAGGTAAATGTCTTTTCAAATTCTTGAAAGGGTCAAA
TGCTtagaaaaattcttgaaatactttaggtgtacaaactttcgcaatCA
GAAACTTTTGCTAggttcaaaaatatttactttcatgaatttgaggaaaa
aatatttttcgcaagCACAAACTTTTTcgaatcgttggataaaaatgaga
aattttcaacaaaattgttCCTTGAATccgataaaaaattttctttgagt
tTGAAAAGGTGTTGAATACTAAGTTTATCCAATTCAAGAAGTATGTTTGT
CCCTCTGTCTAAGGCGGTTTGTGCGcaaatcttttttattatatattgat
ttgcaaaagtttatgttctcaataaagatttttttgtcaaatttgcaAAA
AGTAAGTGTTGTAAATTTCGCATTTTTTGTATTGCAAAGTGCAAATTTGC
ACGCCTACAGTCTAATATTtacatattttcttttctttgtgcTACTGATG
TCAGGCCAGTTCTCATCTCTCTGTGCATATTCATTTATCAGCCATTCTAC
CTTAAAATTTATCTGTAGatatttttgcaatattttcaaaaaatgattca
atttttgcAGGACTTATTTTTGCAGGCACAGGAACTTGTAAGTTTCCCAG
GGGTAAAATTTAAGGAATCAGCCGCTTTTATTGGCCATTCTATTATAGAA
TTTACGAGGCAGACATCAAAGTTTCTAGTGTCTGGAAAATATATCTAGCA
TAACAGTGTGGGgttacatttttattaaggtGTCCAAGAATGCTTTAACT
TTATATTTCCTAAAtcttattattttcaatttcttctaaAAATTTGTGTC
TTTGTGTCTTATCTTTagataaataaatcaaaacagaaTGGCTTTAGAAA
TCAAGAAAGTTTTAATCAGTGATAAAGTGGATTCTAGTTGTCAAACAGTG
CTTGAAGAAAACAGCATTGAAGTGGATTACAAACCTGGCCTGTCAAAAGA
TGAACTCAAAGCTATCATCAAGGTGCCACATTCATTTCCTGGACAATCCA
ATGATTGATGAAAATCTTTATGATGGCCTTCTTGAATACCAATACTTGGA
TTTCTGCAACTATCCACAAAAAGATAGATGATAGATAAAGATGTgagatt
tttctaattttggaaAACAATTCAGAGGATAATATTAtggttttaatatt
ttatttttaggattACGACGGTCTTATAGTCAGATCAGCCACCAAAGTGA
CGCAAGATGTTTATGATTGTGCTGAAAGGTTGAAGATTATTGGCAGAGCT
GGTACTGGTGTGGATAATATTGACCAAATTTCTGCGTCAGCAAAAGGAGT
TCTTGTCATGAAGTAAGAAGCTGTAAAGATTTCTTAATCAATTACTTGCA
TGGTCTTTTAGAAAAGggattttatttaaattttagatttattagtttgg
agtgaagaaaaaaagcaaaattgattttaaataaCAAACGGTTTTCTTTT
TTCAGCACACCGGGTGGAAATACACTGAGTGCAGCAGAACACACCTGCGC
CATGATCTCTGCTCTTGCAAGGTATACCTTATTTGTCAAATATTTTAGCT
CATTTTGTTTAACTgaccaaaaaacgaaaaaaacgaAAGCAGCATGGAGC
ACAGAGAAAGTCTAAGTCTGATCCATACATACCATACCTACCTGCCTACA
CATTACGAAGTTGACTGACCAGGTATGAACGATAGAAAAATAAGATCATT
TCCTTTTTACATTATCTTTTTTACATTAATTACCTTGAGTTTAAATCATT
GAGAGGGATTAACTAAAGTCTTTACATCTGTTGAGAAGGCTgtttttcga
attcaaatcctACTGAGAAAGTCACGACCTGATCGCAACACTGTTCTAGA
GAGAAACTCAATAATCGTGCTTATCGCTATCTCTTATCTTCTTTCAGACA
CATTGGTCAAGGTTATGCTTCAATGTTGGAAGGAAAATGGGAGAGATCTA
AGGTAATCTATACAGAAGCGTGAAAATTAGTATATGTTATCACATGATAA
TGAGTGAAATTCGGGAATAATTGTACGAGTGATTGCACGagggatttttt
tgtttttaattttctgagtccttttcttatattgttgttcatagtttttc
tttctcacaaaaaaaACGTTCGCGGcatcgaagagtgtgattaacggtta
attgctctctttgaaggcacgccaaatgagaaaaaatacaGTCGGTAGTC
CATCGTGCGATTATACATGATAAACATCGACAACGACACTTTAGGATTTA
CGCTCGCGTTTACTTTGGCTGAATGACGTCAAATTTCGCGAAGGTAACCC
GGAACCCCTTTCAAGGAGCTTTAAGGACAAGGGCTTTATTGTACACCATC
CTATTTTTGTAGAATTCATATACCAGCTCTTTTAATCGTTATTTTGATAG
TTTATGGGATGTGAACTCGGTGGAAAAACACTGGCTATTATCGGGCTTGG
TCGGATCGGACGTGAAGTGGCTTCAAGAATGCAATCTTACGGAATGAAGG
TCAAAATTATGAATTAAACTCTCGCTAATTCCAACTCGAACAGgattata
aagttttttactGGCTTTTCCCCATGACAGAAGTtgagaatgatagaatg
atttgaataaaagaagttcgaattagcgagggTCAACTGTATCGTGCATT
CTGTATCAAATTTCCCATAATGCTTAACCTTAATAATGTTTTAGTGAAAT
AGTTACCTTTTTAACTAAATGAACTGTCCCTTTCCTGTCCTTTGAACGGA
CATTCTTTTTCTTACAAATCTAAAGCAGCATCTCTTATCTTTTCTCCAAA
CCTAAAACCATCGAATTTATTTCAACCTTTCTCGATTTGGTCGTTCACAG
ACGGTGGGTTACGATCCTTTGGTTTCACCAGAAGAAGCTGCTACATTTGG
TGTGGAGtatttacaattaaaaaatatttggcCCATCGCTGACTTTGTCA
CAGTTCATGTACCTCTCATCAAGCCAACACGTGGTATGTTCAACTTCCTT
CCAATGAAAGGTTTCCTTCTTGTTGCCTGCATCTGTGTGAGTGATATCGT
tggagattttcaaaaaatctgaatttttagATCTTGCTTTTAGTTAAACA
AAATGCTAGGGGACTACAAAATGGTAGTGACGTTTATCTCTGAATGTACA
GTTGATTctcaataactcgaacctcttaatctcgaatgtctccttaactc
gaacaagttttatagtcccttcagttaacaatgtcaTTTAAACTTTATTC
GAAAAGATTTGCGTTCCCTGTTTGTGTTTCAGCTATGGAGACtccaattt
caatttcatctttttctttCCATTTGAAGGGATGATCAACGCATCGGTGT
TCGAAGTTTGCAAACCCTCCATGAAAGTGATCAATGTTGCACGTGGTGGA
ATCATTGATGAAAAGGATCTCCTCAACGCATTGAATGCTGGGAAATGTGG
GGGAGCAGCACTTGATGTCTTCGAAACNTCAACGCATTGAATGCTGGCAA
ATGTGGGGGAGCAGCACTTGATGTCTTCGAAACTGAACCACCTAAAGGTT
GATTTAAATTCCTGATCATTGTTATGTGCGGTGAAGATCTTCTACAAAGA
AATCTACACAATTTAGAAAGTGCTCATTTAAGTCACTCCTCAAATTCGGC
TATATATCAATAGAGTttcaatatgaaattttttacCATCTTGTTTTCCA
TTTGGAAGATTAACCTAGGATCAAAGAAGGAATCTTCTGGCtgagtttca
tttttcatttgtttgtcCCCTAATGACATTCGtcgaaatttagttttttt
aactttttctcttCGCAGAGGGCAGTGTCAGCATGGAGTTAGTGAAACAT
CCTAAGACCCTATGCACACCACATTTGGGAGCGAGTACGACAGAAGCACA
GTTGCGCGTTGCTAAGGAGATTGCAGAACAATTTGTGGATGCGGTCAATG
GGAAACCCATGGTCGGCTTGGTGAGTGCTTCTTACTCGACTCTTTTCAGG
AACGATTTCTTTGGTAGGTCCCGAGTAATCTAGGACTTGTTTTAATGGGC
TCCGCGTCCTACTCGGCCATATAAAAGTGAAGATggttagtctgaatcgc
agacctctatagatatacttcctataagaaacttttatcgctagaggatg
agcagaagcttAGAAGATGGTCATCCCTAGTACTATAGCCTATATAGAAG
ACTGCTTCTGAAGGCCTTAgaatattgattgatttaaaGAACGagcattt
gtttcatttgaacCTCGTTGACTTTATTGCCATCATGATTCCCACGAATA
CTGTTCATTTTAATCGAATAGCAAAGAACCAATGACATCGATCTCTCGAA
AGAATTTGAAACTCGCGTTTCTACAGGTTTAACCCCCTTGTTTATCATTG
ACAAAAACCGCAATTCTACAATTTCAAAATACCCATTACACCAATCCGTT
TATTTCAAGGTCAACGCACCAGCTTTATCGCAATTGGCCAACCCTTTGTA
CGCACCTTGGGTGGAACTAGCTCAGAAACTCGGCTCCCTAGCCTCCAATC
TCAGTGATTCAGCAAATTTGACTTTGCATTTGGATGGTGATGAATTGAAA
CCAGCCACCAGGCTATTGAACACTGCGCTTTGTTTTGGACTTGCTAAAGC
TAAAGGATTGGACTGCAATATGATCAGTGCTGTCAGTCTTCTCAAAGAGA
AAAACATAGTGGTAAGTCTATACTACATTCACTATGTCTGCGATTTGTCA
CTTGACAAGAATTATCTACCGCGgtacggcaaaaaaaaaacgtcACCAAT
TTTAATTGTAGCGCTGCCAGATTATCGAAATGACCGGGAAAAACTATTAA
AGCATATTCAAAAGTTTCCTGGAAGTTTTGACTTAAAAGAGCTATTTTTC
TAAAAGATATGcctttatatatattttaggAATCGAGTACGGAATGTTTT
ATCTCAGACAAAATTATGCCAAAATATCCCTCGTAGAATGTCTAAATAAT
ACCCGATTACTAAAAGATTTTAGACAACACTACGATAAAGTTTGTCAATA
AAAATCTAGCTTTTGCTTTATTGATcaatgtaaaatttgaaaatgctcTT
GGCCTGAACCATAAAGCTCACCTCAAAAACAGGGGTCGTGATCATACCCT
TCGTAAATGTGACCTTGATGATCATTTCAACATCTTCTTCACTTTAGGTT
GTCAACTCACCAACACCCAAAGATCTCGCTTACTCTGCTCTCTCTGTTTC
AACAAGCGAAAACTCATGGCTCGTCACCGGCTTTCTGAGCAGAGGAAGAC
CCTGCATTGGAACTCTCCAAAATACTGAGCTCGCTAACCCAGTCGTTTTA
GAGAGCGGTTTGGTCTATGCAGTTTCCGACTCATCAGAGAAAGAACTTCT
GCTGACTTCAGCAGAAATGGGCGTTTCTTCAGTGAGTCTATCACGGAATG
GAAACCGGGTGGTTTTTGTCGCAAGTGTCGCAGAGAAACCGGCCAACGAA
CTATTCAAATTCATACAATTCTAGggagtatttttgaaattttaggttag
ataggaaatatttttcaaaagatatggCGCATATGTCTGAAGTATAGGGA
GCTTCTTcgtcatttcaaatttttgtggtttgtaaattttctttacatat
ttgaatttttttattttattctgtcAACTAGGATTTTTCCCGATATTTAT
AAAACTGTAGCTCATAACCGAATCAAAAATTACGATATTAATATTCAAGT
ATTCCTTTGTTCCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044065XLOC_044065Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070846-exon-scaffold_58-1491911889:827386..830951TCONS_00070846-exon-scaffold_58-1491911889:827386..830951Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:827386..830951TCONS_00070846-exon-scaffold_58-1510915933:827386..830951Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:827386..830951TCONS_00070846-exon-scaffold_58-1575043694:827386..830951Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:831804..831957TCONS_00070846-exon-scaffold_58-1491911889:831804..831957Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:831804..831957TCONS_00070846-exon-scaffold_58-1510915933:831804..831957Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:831804..831957TCONS_00070846-exon-scaffold_58-1575043694:831804..831957Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:832146..832297TCONS_00070846-exon-scaffold_58-1491911889:832146..832297Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:832146..832297TCONS_00070846-exon-scaffold_58-1510915933:832146..832297Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:832146..832297TCONS_00070846-exon-scaffold_58-1575043694:832146..832297Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:832441..832506TCONS_00070846-exon-scaffold_58-1491911889:832441..832506Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:832441..832506TCONS_00070846-exon-scaffold_58-1510915933:832441..832506Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:832441..832506TCONS_00070846-exon-scaffold_58-1575043694:832441..832506Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:832883..832937TCONS_00070846-exon-scaffold_58-1491911889:832883..832937Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:832883..832937TCONS_00070846-exon-scaffold_58-1510915933:832883..832937Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:832883..832937TCONS_00070846-exon-scaffold_58-1575043694:832883..832937Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:833386..833484TCONS_00070846-exon-scaffold_58-1491911889:833386..833484Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:833386..833484TCONS_00070846-exon-scaffold_58-1510915933:833386..833484Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:833386..833484TCONS_00070846-exon-scaffold_58-1575043694:833386..833484Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:833836..833968TCONS_00070846-exon-scaffold_58-1491911889:833836..833968Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:833836..833968TCONS_00070846-exon-scaffold_58-1510915933:833836..833968Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:833836..833968TCONS_00070846-exon-scaffold_58-1575043694:833836..833968Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:834315..834451TCONS_00070846-exon-scaffold_58-1491911889:834315..834451Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:834315..834451TCONS_00070846-exon-scaffold_58-1510915933:834315..834451Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:834315..834451TCONS_00070846-exon-scaffold_58-1575043694:834315..834451Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:834508..834532TCONS_00070846-exon-scaffold_58-1491911889:834508..834532Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:834508..834532TCONS_00070846-exon-scaffold_58-1510915933:834508..834532Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:834508..834532TCONS_00070846-exon-scaffold_58-1575043694:834508..834532Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:834804..834955TCONS_00070846-exon-scaffold_58-1491911889:834804..834955Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:834804..834955TCONS_00070846-exon-scaffold_58-1510915933:834804..834955Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:834804..834955TCONS_00070846-exon-scaffold_58-1575043694:834804..834955Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:835445..835696TCONS_00070846-exon-scaffold_58-1491911889:835445..835696Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:835445..835696TCONS_00070846-exon-scaffold_58-1510915933:835445..835696Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:835445..835696TCONS_00070846-exon-scaffold_58-1575043694:835445..835696Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1491911889:836183..836751TCONS_00070846-exon-scaffold_58-1491911889:836183..836751Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1510915933:836183..836751TCONS_00070846-exon-scaffold_58-1510915933:836183..836751Clytia hemisphaericaexon
TCONS_00070846-exon-scaffold_58-1575043694:836183..836751TCONS_00070846-exon-scaffold_58-1575043694:836183..836751Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:827386..836751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.02474	1.17823	1.18972	1.0089	2.17341	2.119	1.52788	1.95954	2.17905	3.40042	1.3033	2.05466	0.435161	0	0.777814	0.791905	0.575992	0.646677	0	0.207744	1.96793	2.13639	0	0.523833	0.273055	0.480789	6.07553	4.26885	2.051	0.514462
Blast
[Close]
BLAST of TCONS_00070846 vs. Swiss-Prot (Human)
Match: SERA (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4)

HSP 1 Score: 422.935 bits (1086), Expect = 4.968e-131
Identity = 219/409 (53.55%), Postives = 289/409 (70.66%), Query Frame = 1 
Query: 3598 IKKVLISDKVDSSCQTVLEENSIEVDYKPGLSKDELKAIIKDYDGLIVRSATKVTQDVYDCAERLKIIGRAGTGVDNIDQISASAKGVLVMNTPGGNTLSAAEHTCAMISALARHIGQGYASMLEGKWERSKFMGCELGGKTLAIIGLGRIGREVASRMQSYGMKTVGYDPLVSPEEAATFGVEYLQLKNIWPIADFVTVHVPLIKPTRGMINASVFEVCKPSMKVINVARGGIIDEKDLLNALNAGKCGGAALDVFETEPPKEGSVSMELVKHPKTLCTPHLGASTTEAQLRVAKEIAEQFVDAVNGKPMVGLVNAPALSQLANPLYAPWVELAQKXXXXXXXXXXXXXXTLHL--DGDELKPATRLLNTALCFGLAK--AKGLDCNMISAVSLLKEKNIVVVNSPTP 4812
            ++KVLISD +D  C+ +L++  ++V  K  LSK+EL A ++D +GLIVRSATKVT DV + AE+L+++GRAGTGVDN+D  +A+ KG+LVMNTP GN+LSAAE TC MI  LAR I Q  ASM +GKWER KFMG EL GKTL I+GLGRIGREVA+RMQS+GMKT+GYDP++SPE +A+FGV+ L L+ IWP+ DF+TVH PL+  T G++N + F  CK  ++V+N ARGGI+DE  LL AL +G+C GAALDVF  EPP++ +    LV H   +  PHLGAST EAQ R  +EIA QFVD V GK + G+VNA AL+   +P   PW+ LA+ LG+L    + S   T+ +   G  LK A   L+ A+  GL K  +K  D N+++A  L+KE  + V  S +P
Sbjct:    6 LRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRA----LVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEAGLNVTTSHSP 410
The following BLAST results are available for this feature:
BLAST of TCONS_00070846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SERA4.968e-13153.55D-3-phosphoglycerate dehydrogenase OS=Homo sapiens... [more]
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