TCONS_00070906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070906
Unique NameTCONS_00070906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5693

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070906 ID=TCONS_00070906|Name=TCONS_00070906|organism=Clytia hemisphaerica|type=transcript|length=5693bp
AGCACACCCATCAGCActattttcgactttaaagttTAAGTGCATCTAAA
ACATTCCTTCCCAAAATCAATTCagatattcaattcccaattttctaaaa
agcttCTTTCTTTATAAAGAATATTAATCTAATAAGTGAACAAAAAGAgc
aataaaaatgctcaatAACAAAAATTTTACCTTAAACTAGAAAAATTACA
gtgaaaatgtaataaaaaagtttttaaaaaactaAGTGTCAAAAATACAT
GGCTCTTAAAAAAAtaacatgctgaatcaattaaaaactaaaaaccATTT
TAACAAATCATCTGGTCGTCTATacaaacataaaaacaaaatttttaaaa
aagtgacTCACAGACACTTATTTCCAATTGAGTTTTAAAATATAATGATC
GATTGACATGTTTAAAATCTGTTCGAATGGACGTTAAGGCTATCAACTTA
GAATGGTCTAAAGTGTCTTCAATATTCTTTATcattaatgcatcaaaaac
tgGACCGAGGGGTTAGACGTTGGAAACTTACTGTTgtgaatttcaatatt
attatAAATCTGTAAGCAACATGTAACATTTTATTTAATGAAACAGGATT
GCAGATAATATGACACTACAAAAAGTGATAACAAGTACTGGAAGGGCATT
TTTAGATGCATGGCTGAAAACTGGTACATCAGTATTACACTTGTTGTTAC
TGCAGCAACTATAACAGACATacatattttcattattttggtcTTTGATA
CAAGGTTTTTCTTTAGTGAAATCACACATAGGTGAACCAATTGACTGACA
TGTGCGTTGAATGAAAACAGGCTCCTCATCAAATGGTATCGAAGAGTTTT
GTCTTGCATACCGTGTTTCAGTGGAACAGACTTTATTCCCTGTACAATAT
TCGACACGAATTGGGGGTTCAGCTTCGATAGGGTTAATACAGCCACCATT
ACCAAGCTGACATTGATAACATCCAATTTCAGCATTCACTATGGTATAAA
ATTACTTTCATGAATATTTATTAACCGGCAGTATAAGAGAATAGCCCAGT
TTACATGAAACCTGTTCTATAATTTCTATTACaacttttcaacctttttt
aagTATTTAAGTACAAGAGAggttcaaactttacaaatgagAGAACAAGT
TTTAAAAGGTCAATATGATGAATACAATTatgaaataataaatatatacC
TGAGTTCATCCAAAACATTTGAACAATAATAGCTAGCATTCCAAAACTGT
TCATCTTGCAActgctaaattttatttttattgttaattATTAAATACTA
TGTCTATATTCATTTAGCAAAAAACGTCAACAGAAAAAGGTATTTTAGAA
AGAAAGTCCAATTTGATGTGCATGGCTATGTTAAGCCATGTTTATTATTC
CTGTAATATACCAAATGTAAGGTTATTGAAAGAAATCAATGCTTTCTACC
AACAATCGGCACCAAAATATCTGACACagaaggggaattccctcaaaact
ttaaaaccgcaagtgatttttaagtgctagaaagtagagttttaacatta
gacttaagacttaggaccttagaatctcaggatctaaaagctcaaaaatg
ttccaatatgtAAACAAAGTTTACAGCTTTACAGCTTTTGTATGATGTAG
TAATTTGTTATTGCCCCACAAATTGCTTAagtgttttgaaatcaaaggcC
CATCTATAATGCTATGTTCAGGccaaaaagatgtttttttattttggcct
GAACATGATGCAAAGATGAGCCACTTTGTGGTTCTTTTAGTCCTCTTTGT
TAATAAAAAGATTAGTTGTTTTTAATGTTATGAAAAAGTCTGCCCTATAA
AAGCATTTAAATAATTTGCTTTAATAAATCTTAGTCATTTTAAATGGTTA
AAATTACAAAGGTTAATGACTttataacaagtgatacttttatgttTATG
GACCTATTGGAATgaacctacctggttatcaaaactaatcaatgaacatt
gaaacaatgaaacaatgaaacataaTAGACATACCtgctcaaaataaaaa
aaatataatgaaagcatatgtatctattgggagaaactatcaacactatt
gaaaaagacttttgaaaaagaaacgaGACGGCTTGGAGTAGAAAATCTTG
CATAGTGCACGATTATTCATAGATGATAGATGGATAGATAGATCATAGAA
TGAAATAATAATATTAAACGACTGAAGTTGGCTATTCTTgctatttttgg
tcatttttggtTGTCTTAGGCCTACTTTTATCCAAgaaagatacaaaaat
ctgaacACAGTCTGCATGAATGAGGGCtgtgaaaatgtcaaaaaatatat
acatataCTTTTGAGACAAACTTTAAGgaaaaatgtatttaaaaattcat
caaaaatctTTGTCAAAATAAATCTGGAAAATATTAAGGCACTGGATATA
TGGGTAGAAATgcaaaaaaccaaaaagaacAGCCAGAAAATATCTGAAGT
GACTCTGAAACCAGGGACAAAAAACTCAGACTCACAAAAAAGTGGTATCG
AAAATAACTATAAGGTGAAAGTTTgcctaaattttaaaatctcaaagtat
atattttgctatattttgttcatttttgggTGTTAAATCCCTACTCCACA
GGGCTTGTAAATGTTTTATCCTAGTAAGATACGTAAAATTAATGCAGAAA
GAAACTTTAGTGTCATCGCAAGCAAAAAGTaagaatcttcatttttcaat
ttttcttcatatAATTTCTCAAtatctaaaaaacttttatttttttagat
tattcatcCCTCATACATCTTTCCAAcaatgaataactttttactttGTA
AATGGGTCCTGATGTTTAAAAAGTAAAGTATCCGCATACTTTATAATGTC
TTCCTTCAATGACATTAGAAACAATACTACCTCAATTGAACAAAATCACA
ATCATCTTTGACAGGCATTTAATTTGGCTGATAGTGATACCTTGGAAAAT
AAATATGACAGGAGTTTAATTTGGCCATTAGGTATTTTTGGCAATATATT
GCTGCTAATTATAATATAAGAAAAATGGCTGTTTTCAAGCTCAaaaaagc
acaaatttggaaatACATGAAATATTGGCTGTATGGGTGGGAATTATATA
ACTTGGGATTTCAGGACAATTTTAAGGTTAATTTTCTTTCTGcataaaaa
tttcttcccttgaaGCTAAAACTTTTTTACTGCTGTTGCTTGCCCTGGAT
TCATATCTTTGTTTTGTATCCCttaaagggaagaaattttttccaacaaa
tccacaaaattaaattccgcaaaacacaaatattctcatgatttaaaaaa
tcttctATAACATTGGTCTTTTAagggcaaaataggccatatattttaaa
caaaaaacccTCTCAACAGCAAAACTggaaccgcaaaattaaattccgca
aaaatttcttcccttaaggtaagatTTTCATTAccacactaagattcttg
tcaattttccagaatctttgaaaattttaattcctCCTGGATAACCAGCA
TAAGATTGAAAGCGGCTATTTCTAAAGGTAATGATAATCTTTAATGAAAT
TGCTTAACTTTCAGAAGCTTGTTTTTCAACTACCCTAAGTCCTATAGTAT
TTTTtcgctagaaaagtggcaaaagaATCTTTATATAATCTTTAATCGGA
TACATTTTGAAATCAATGACCAATCAATTAGTTCCCATAAGCAATACCGT
AAATttgtctaatgttgacatccctcatctaattctaATACCCTTCTTTA
CTCCTgggaataataaaataataaaagttcGGAATCGTGAGAGGAAAACA
TCTTTCAGTCTTTGTTGTCacaatcagtgattctgaccttcctttTAATC
CTATCTCTTGAACATTcataattgattgattttaaaACTTGTAGCcattt
atcaatcaatcaatcaatctgtcaatcatcttTCCTTAATACTGTCCAGA
CCAAACTTTTAGAAAATTGTAAAATCGTACTGATTGAACCGCAACCCatt
gatcaaaatttgaatgaatacactcaatttttttaaatcttaagcCTGCT
Gtccactacacgtttttttttttataaggaaccttaactttgctctgagc
ctggagttccttatttttacagagaatttcagtctcaaagttccttatgg
agttccttactacataggaaattttgaactttttgccccttgaaagatca
aaatttggtcaaattagtcccaataaggtacattattttcaaatccacat
attctcagcctgagcagttccttaacaattccttattttttgaaccactT
TCAGcttcgagttccttataaacgtgttccttataaaaaaaaaacgtgta
gtgctATTTTTGGTTATCGCGAAATGTAATTGTGAAATGTTATCACATGT
CTGAAGTTATTTCTAGATTTTACATGTACACTgtaaaataccttaaagga
agaaattttggcggaaagaaaatttggcggatttggcggatttgactgaa
atccgccaaattaagttctaTTGTTAAAAACTAGCGTGAAACAAAGGTTT
TGCAATTGGATAAAATCTtgagtgaaaactttttcactTCCTATCGTGAA
ATAAAATGACAAGATAGACAGGTTTATTTCACGATAGACAGTGTTATTTA
TAGATGATTATTTTGCGATAGCTAAAAATAGCCTAGTGGACggcacGCTT
TAGAGTTCAATTAATTCATTTACAGTACTTGAACTTTACATTTTCCCTGC
AATTTTGTGTGCCTTCTCATCCTtgggtttcctcaagtaactcatattgc
gcattctgattggttagagaaaacgaaagtggttttcacGCGTGAATTGA
GAGCAAGTGGTTTTAATAGAGATAAACTCTATTTAGGATTATTTTGACGT
GCTGGCTACAGGAAAcataatttgataaaatcaaaGGTATTTGATACAAt
tgaaggtattcaatatgattgaAGGCAAtcgatcaaaatcaaatcaatta
aaacGATTGAACAAATCGAGAATGGTTgaagaaatggaagaaaatgCCAT
ATCTGGAGTCGAGTGAGTATGCGATGCGATCAGCGATAAAATTGGTTATC
ATCgatcattatcaattacttagatCACAATCGAACGTTGGGTTGGTACT
GTCTggatcaaaaaaaaaacacacggTATTATTTTATTTACCAAGCTGGC
CAGACTCCCCCTCGGCCTCGCAAAAAAGATTTGCTTCACACTACTAGCAG
ACTAGAAAGTGCTGAGATCATCTTGAAACCAGGAAACCAAGGCAGGGCAG
AATCTTCAAGGCTTAAGAATATCTCTTTAAAGAATTGACATAGTACTTAT
ATATAATGTATGATTAATGATATCAGATAACGGTATCTCTTGTTGCGTCG
CCACGTCGCCACCTACACTACACCTATGTATTTATTTTATCTTGTTCTTT
CTATTTATAAACTCATCCTCTTAAAGGAACGAtacttttacttttctttt
ttttttctgtcaaaaagttaagaaagattttcccttatttttctttttta
gttaaCATAAAACCCAACAAAATATTTactagttaatttttttttctctt
cgtaTAGAAGTGTACATAGCTCGAAAACCACCCATGGTTAAAC
Run BLAST on NCBI

protein sequence of TCONS_00070906-protein

>TCONS_00070906-protein ID=TCONS_00070906-protein|Name=TCONS_00070906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=106bp
MNEGCENVKKYIHILLRQTLRKNVFKNSSKIFVKINLENIKALDIWVEMQ
KTKKNSQKISEVTLKPGTKNSDSQKSGIENNYKVKVCLNFKISKYIFCYI
LFIFGC
Run BLAST on NCBI

transcript from alignment at scaffold_58:139146..150926-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070906 ID=TCONS_00070906|Name=TCONS_00070906|organism=Clytia hemisphaerica|type=transcript|length=11781bp|location=Sequence derived from alignment at scaffold_58:139146..150926- (Clytia hemisphaerica)
AGCACACCCATCAGCACTATTTTCGACTTTAAAGTTTAAGTGCATCTAAA
ACATTCCTTCCCAAAATCAATTCAGATATTCAATTCCCAATTTTCTAAAA
AGCTTCTTTCTTTATAAAGAATATTAATCTAATAAGTGAACAAAAAGAGC
AATAAAAATGCTCAATAACAAAAATTTTACCTTAAACTAGAAAAATTACA
GTGAAAATGTAATAAAAAAGTTTTTAAAAAACTAAGTGTCAAAAATACAT
GGCTCTTAAAAAAATAACATGCTGAATCAATTAAAAACTAAAAACCATTT
TAACAAATCATCTGGTCGTCTATACAAACATAAAAACAAAATTTTTAAAA
AAGTGACTCACAGACACTTATTTCCAATTGAGTTTTAAAATATAATGATC
GATTGACATGTTTAAAATCTGTTCGAATGGACGTTAAGGCTATCAACTTA
GAATGGTCTAAAGTGTCTTCAATATTCTTTATCATTAATGCATCAAAAAC
TGGACCGAGGGGTTAGACGTTGGAAACTTACTGTTGTGAATTTCAATATT
ATTATAAATCTGTAAGCAACATGTAACATTTTATTTAATGAAACAGGATT
GCAGATAATATGACACTACAAAAAGTGATAACAAGTACTGGAAGGGCATT
TTTAGATGCATGGCTGAAAACTGGTACATCAGTATTACACTTGTTGTTAC
TGCAGCAACTATAACAGACATACATATTTTCATTATTTTGGTCTTTGATA
CAAGGTTTTTCTTTAGTGAAATCACACATAGGTGAACCAATTGACTGACA
TGTGCGTTGAATGAAAACAGGCTCCTCATCAAATGGTATCGAAGAGTTTT
GTCTTGCATACCGTGTTTCAGTGGAACAGACTTTATTCCCTGTACAATAT
TCGACACGAATTGGGGGTTCAGCTTCGATAGGGTTAATACAGCCACCATT
ACCAAGCTGACATTGATAACATCCAATTTCAGCATTCACTATGGTATAAA
ATTACTTTCATGAATATTTATTAACCGGCAGTATAAGAGAATAGCCCAGT
TTACATGAAACCTGTTCTATAATTTCTATTACAACTTTTCAACCTTTTTT
AAGTATTTAAGTACAAGAGAGGTTCAAACTTTACAAATGAGAGAACAAGT
TTTAAAAGGTCAATATGATGAATACAATTATGAAATAATAAATATATACC
TGAGTTCATCCAAAACATTTGAACAATAATAGCTAGCATTCCAAAACTGT
TCATCTTGCAACTGCTAAATTTTATTTTTATTGTTAATTATTAAATACTA
TGTCTATATTCATTTAGCAAAAAACGTCAACAGAAAAAGGTATTTTAGAA
AGAAAGTCCAATTTGATGTGCATGGCTATGTTAAGCCATGTTTATTATTC
CTGTAATATACCAAATGTAAGGTTATTGAAAGAAATCAATGCTTTCTACC
AACAATCGGCACCAAAATATCTGACACAGAAGGGGAATTCCCTCAAAACT
TTAAAACCGCAAGTGATTTTTAAGTGCTAGAAAGTAGAGTTTTAACATTA
GACTTAAGACTTAGGACCTTAGAATCTCAGGATCTAAAAGCTCAAAAATG
TTCCAATATGTAAACAAAGTTTACAGCTTTACAGCTTTTGTATGATGTAG
TAATTTGTTATTGCCCCACAAATTGCTTAAGTGTTTTGAAATCAAAGGCC
CATCTATAATGCTATGTTCAGGCCAAAAAGATGTTTTTTTATTTTGGCCT
GAACATGATGCAAAGATGAGCCACTTTGTGGTTCTTTTAGTCCTCTTTGT
TAATAAAAAGATTAGTTGTTTTTAATGTTATGAAAAAGTCTGCCCTATAA
AAGCATTTAAATAATTTGCTTTAATAAATCTTAGTCATTTTAAATGGTTA
AAATTACAAAGGTTAATGACTTTATAACAAGTGATACTTTTATGTTTATG
GACCTATTGGAATGAACCTACCTGGTTATCAAAACTAATCAATGAACATT
GAAACAATGAAACAATGAAACATAATAGACATACCTGCTCAAAATAAAAA
AAATATAATGAAAGCATATGTATCTATTGGGAGAAACTATCAACACTATT
GAAAAAGACTTTTGAAAAAGAAACGAGACGGCTTGGAGTAGAAAATCTTG
CATAGTGCACGATTATTCATAGATGATAGATGGATAGATAGATCATAGAA
TGAAATAATAATATTAAACGACTGAAGTTGGCTATTCTTGCTATTTTTGG
TCATTTTTGGTTGTCTTAGGCCTACTTTTATCCAAGAAAGATACAAAAAT
CTGAACACAGTCTGCATGAATGAGGGCTGTGAAAATGTCAAAAAATATAT
ACATATACTTTTGAGACAAACTTTAAGGAAAAATGTATTTAAAAATTCAT
CAAAAATCTTTGTCAAAATAAATCTGGAAAATATTAAGGCACTGGATATA
TGGGTAGAAATGCAAAAAACCAAAAAGAACAGCCAGAAAATATCTGAAGT
GACTCTGAAACCAGGGACAAAAAACTCAGACTCACAAAAAAGTGGTATCG
AAAATAACTATAAGGTGAAAGTTTGCCTAAATTTTAAAATCTCAAAGTAT
ATATTTTGCTATATTTTGTTCATTTTTGGGTGTTAAATCCCTACTCCACA
GGGCTTGTAAATGTTTTATCCTAGTAAGATACGTAAAATTAATGCAGAAA
GAAACTTTAGTGTCATCGCAAGCAAAAAGTAAGAATCTTCATTTTTCAAT
TTTTCTTCATATAATTTCTCAATATCTAAAAAACTTTTATTTTTTTAGAT
TATTCATCCCTCATACATCTTTCCAACAATGAATAACTTTTTACTTTGTA
AATGGGTCCTGATGTTTAAAAAGTAAAGTATCCGCATACTTTATAATGTC
TTCCTTCAATGACATTAGAAACAATACTACCTCAATTGAACAAAATCACA
ATCATCTTTGACAGGCATTTAATTTGGCTGATAGTGATACCTTGGAAAAT
AAATATGACAGGAGTTTAATTTGGCCATTAGGTATTTTTGGCAATATATT
GCTGCTAATTATAATATAAGAAAAATGGCTGTTTTCAAGCTCAAAAAAGC
ACAAATTTGGAAATACATGAAATATTGGCTGTATGGGTGGGAATTATATA
ACTTGGGATTTCAGGACAATTTTAAGGTTAATTTTCTTTCTGCATAAAAA
TTTCTTCCCTTGAAGCTAAAACTTTTTTACTGCTGTTGCTTGCCCTGGAT
TCATATCTTTGTTTTGTATCCCTTAAAGGGAAGAAATTTTTTCCAACAAA
TCCACAAAATTAAATTCCGCAAAACACAAATATTCTCATGATTTAAAAAA
TCTTCTATAACATTGGTCTTTTAAGGGCAAAATAGGCCATATATTTTAAA
CAAAAAACCCTCTCAACAGCAAAACTGGAACCGCAAAATTAAATTCCGCA
AAAATTTCTTCCCTTAAGGTAAGATTTTCATTACCACACTAAGATTCTTG
TCAATTTTCCAGAATCTTTGAAAATTTTAATTCCTCCTGGATAACCAGCA
TAAGATTGAAAGCGGCTATTTCTAAAGGTAATGATAATCTTTAATGAAAT
TGCTTAACTTTCAGAAGCTTGTTTTTCAACTACCCTAAGTCCTATAGTAT
TTTTTCGCTAGAAAAGTGGCAAAAGAATCTTTATATAATCTTTAATCGGA
TACATTTTGAAATCAATGACCAATCAATTAGTTCCCATAAGCAATACCGT
AAATTTGTCTAATGTTGACATCCCTCATCTAATTCTAATACCCTTCTTTA
CTCCTGGGAATAATAAAATAATAAAAGTTCGGAATCGTGAGAGGAAAACA
TCTTTCAGTCTTTGTTGTCACAATCAGTGATTCTGACCTTCCTTTTAATC
CTATCTCTTGAACATTCATAATTGATTGATTTTAAAACTTGTAGCCATTT
ATCAATCAATCAATCAATCTGTCAATCATCTTTCCTTAATACTGTCCAGA
CCAAACTTTTAGAAAATTGTAAAATCGTACTGATTGAACCGCAACCCATT
GATCAAAATTTGAATGAATACACTCAATTTTTTTAAATCTTAAGCCTGCT
GTCCACTACACGTTTTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGC
CTGGAGTTCCTTATTTTTACAGAGAATTTCAGTCTCAAAGTTCCTTATGG
AGTTCCTTACTACATAGGAAATTTTGAACTTTTTGCCCCTTGAAAGATCA
AAATTTGGTCAAATTAGTCCCAATAAGGTACATTATTTTCAAATCCACAT
ATTCTCAGCCTGAGCAGTTCCTTAACAATTCCTTATTTTTTGAACCACTT
TCAGCTTCGAGTTCCTTATAAACGTGTTCCTTATAAAAAAAAAACGTGTA
GTGCTATTTTTGGTTATCGCGAAATGTAATTGTGAAATGTTATCACATGT
CTGAAGTTATTTCTAGATTTTACATGTACACTGTAAAATACCTTAAAGGA
AGAAATTTTGGCGGAAAGAAAATTTGGCGGATTTGGCGGATTTGACTGAA
ATCCGCCAAATTAAGTTCTATTGTTAAAAACTAGCGTGAAACAAAGGTTT
TGCAATTGGATAAAATCTTGAGTGAAAACTTTTTCACTTCCTATCGTGAA
ATAAAATGACAAGATAGACAGGTTTATTTCACGATAGACAGTGTTATTTA
TAGATGATTATTTTGCGATAGCTAAAAATAGCCTAGTGGACGGCACGTGC
GTTTGGTTTGGGAACGCGAAACACGAACGCAAACTACCCATGTCTAAACT
TTTCAATATATCTCCAGAACTAACAGATTTTTTGAAATTCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTATGAAACGATTGTC
AAGTTGTTTTGGGATTTGATATGATGGGACAAGTTCTTTGAGAAAGATGT
CAGATTTAATGATTGTTTTGATTTTGACACGTACGTGACGTGGTATACAA
GCCTGTTACGATTGAATATTTGTATCTGCTTTCTCAAAGTTGAAATGACA
AATTGGCGTTGTTACTTGTGACTTGAAGAATAAGGGTAGTGATCCAGTTT
TTGCTTTTCGTCTTTATAGCCTTTTCGTCTTTTGCTCTAATAAGATCAAA
TTAAATGCTTGTTATAGTGGATTTTTGACTGGATTGATGTGTCATTTTGC
ATGTGTTTTGATTTTTGAGATGTTGTCATAAACTTTTTGCAGGTCCAAAA
TCACCCAAACATTTTCTGCAACTCTCCTTGTTTTATTATTGATTTAAACG
ACAGCAAGTCAAAGGAGGCTGTTCTCTAACTATCATTTCTTCCATTGTTC
TGGGGACTGGTCAGTTTATATTTAAAAAATTTTCAACGGCCTGAATTTAT
TATTCTTAACGTTTAACTAATATCCTACATTTGAGGTAACAACATTTGAC
CTTTTTAAGCAAGGGTAGTACCAGCAATGCCAGACATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTGACTGGCAGGTTCACTGCTCCAATTTGCAGCCAAATGTTTTGT
GACTAAATGCTAAACAGGTTTTTTGGAAATACTTGATAAGTCAAATTATT
TTCGCTACAGGAGTTGACGCAGAAAAGGGCTTCACAAAATGACTTAGTCA
TCAAGTATCTTAAATGGAATCACAACCTAACTGTAATGGTATGGAGTACT
TTGAAATTTTAGTGCTGTCCTTTCGAGACAAATACTTGCAGAATTTGTAT
TAAATGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACTTGATAGAGTCAGTGGCTAGACAAGGAC
AGTAATGAATTTCAATAGATTTCTCGAGCATGGATACTTTTGAATAATCA
AAGGACCAAGTTCAAGTCATTTTATGAAAATATTATAAGTTAATGGCTAA
CAGATGATATGTTTTGAACCGTTCGTAATCTCCAAGTTTAGTTTGCTGCA
TACATTCACTACAAACCAAATCTTAATTAGGATGTCTTATTTCCGTTTCA
TGTCACATCTCTGCAAGAGACTTGAATCACATTGTACAGATCTCGAATCA
ACAGCTTAAAGTCAGATCTTCTAAAGCTCTCTTAAAACTCAAATTTAGTT
CTTCAATTTTTTTTTTTTTTTATCTTTGTTTATAACTCTTCCTACTCCTT
TTTTTAAATTTACAGACTACAATTTCTAAGACACATTTCTTCGTAGAGAT
TCCTTTTCACAATAATATATGGAAATTCATGGATGGCAAACTAATATCTT
GAAGGAAAGTCCATACCCTGCTCAAGCTCCTTCCTCTTGAACACTGTTTA
AATACCCTAAGTTTTTGCATGGTGGAGCCTCCGCTGCCCTCTCCGCATGT
GTGTCTGACTCAATGATACACATTATGGGTAGATGGTCTAGGGATTGCTA
TCTTAGGTATCTCAAATCTCTGACCAAGATATTTCTAAGTTTAATTCTAA
CTTGGCCAAGGTAAAATTTTTACATCACTATTTGCAACCTANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNGCGACACCTGTCATCAAAACAGGCTAAGTAAGACCCCCGTCATATA
TAAATACGGGTTACACAGGACACCCGTCGTCAAAACGGGTTAGGCTCTCG
GTTATATCTTGTTGCATCCCCAATGTCATTCATTTCTATTATACATTTTC
GGCATTCTTGTTTACGTTTCGAAATATACTGTTTCCATTACTGCACACTT
ATGTCTCTATTCTATTTCCTCTGTTGCTCATATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GATAATTAAGATTTTACTTAGAAACTTTAATTCTCTTACCCCTGTCTCGG
GCCCCCCTGATATGAGCAAGGGAACCATGATGGCCACCCCTACTGAAAAT
TTCAGATCAAAACAAACAAGGAATTAATTCCTGTAACTTGAAGAAAATTG
GAAAAAACTGGTTTTTTGACTGTTTCTGATCCTAAAGTGCTATTTTTTGG
TAAAAGCTATACAATTTATGTTTGGATTTCTAGAAAGCTTACCCATTCTT
TGTTAATGAAAGTAATCTCTTCATGGAATAAAAAGATATAGTCAAATCTT
GTAGGGTCATTTTTCAAAATTTTTTTGCCAAATTCGATTTTCGCATTTCG
CCATTTTACCCTACGCAAACGCACGTGACGGCAGGCTTTAGAGTTCAATT
AATTCATTTACAGTACTTGAACTTTACATTTTCCCTGCAATTTTGTGTGC
CTTCTCATCCTTGGGTTTCCTCAAGTAACTCATATTGCGCATTCTGATTG
GTTAGAGAAAACGAAAGTGGTTTTCACGCGTGAATTGAGAGCAAGTGGTT
TTAATAGAGATAAACTCTATTTAGGATTATTTTGACGTGCTGGCTACAGG
AAACATAATTTGATAAAATCAAAGGTATTTGATACAATTGAAGGTATTCA
ATATGATTGAAGGCAATCGATCAAAATCAAATCAATTAAAACGATTGAAC
AAATCGAGAATGGTTGAAGAAATGGAAGAAAATGCCATATCTGGAGTCGA
GTGAGTATGCGATGCGATCAGCGATAAAATTGGTTATCATCGATCATTAT
CAATTACTTAGATCACAATCGAACGTTGGGTTGGTACTGTCTGGATCAAA
AAAAAAACACACGGTATTATTTTATTTACCAAGCTGGCCAGACTCCCCCT
CGGCCTCGCAAAAAAGATTTGCTTCACACTACTAGCAGACTAGAAAGTGC
TGAGATCATCTTGAAACCAGGAAACCAAGGCAGGGCAGAATCTTCAAGGC
TTAAGAATATCTCTTTAAAGAATTGACATAGTACTTATATATAATGTATG
ATTAATGATATCAGATAACGGTATCTCTTGTTGCGTCGCCACGTCGCCAC
CTACACTACACCTATGTATTTATTTTATCTTGTTCTTTCTATTTATAAAC
TCATCCTCTTAAAGGAACGATACTTTTACTTTTCTTTTTTTTTTCTGTCA
AAAAGTTAAGAAAGATTTTCCCTTATTTTTCTTTTTTAGTTAACATAAAA
CCCAACAAAATATTTACTAGTTAATTTTTTTTTCTCTTCGTATAGAAGTG
TACATAGCTCGAAAACCACCCATGGTTAAAC

Coding sequence (CDS) from alignment at scaffold_58:139146..150926-

>TCONS_00070906 ID=TCONS_00070906|Name=TCONS_00070906|organism=Clytia hemisphaerica|type=CDS|length=321bp|location=Sequence derived from alignment at scaffold_58:139146..150926- (Clytia hemisphaerica)
ATGAATGAGGGCTGTGAAAATGTCAAAAAATATATACATATACTTTTGAG
ACAAACTTTAAGGAAAAATGTATTTAAAAATTCATCAAAAATCTTTGTCA
AAATAAATCTGGAAAATATTAAGGCACTGGATATATGGGTAGAAATGCAA
AAAACCAAAAAGAACAGCCAGAAAATATCTGAAGTGACTCTGAAACCAGG
GACAAAAAACTCAGACTCACAAAAAAGTGGTATCGAAAATAACTATAAGG
TGAAAGTTTGCCTAAATTTTAAAATCTCAAAGTATATATTTTGCTATATT
TTGTTCATTTTTGGGTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044088XLOC_044088Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070906-proteinTCONS_00070906-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070906-exon-scaffold_58-1575043694:146181..150926TCONS_00070906-exon-scaffold_58-1575043694:146181..150926Clytia hemisphaericaexon
TCONS_00070906-exon-scaffold_58-1575043694:139146..140092TCONS_00070906-exon-scaffold_58-1575043694:139146..140092Clytia hemisphaericaexon
TCONS_00070906-exon-scaffold_58-1510915933:146181..150926TCONS_00070906-exon-scaffold_58-1510915933:146181..150926Clytia hemisphaericaexon
TCONS_00070906-exon-scaffold_58-1510915933:139146..140092TCONS_00070906-exon-scaffold_58-1510915933:139146..140092Clytia hemisphaericaexon
TCONS_00070906-exon-scaffold_58-1491911889:146181..150926TCONS_00070906-exon-scaffold_58-1491911889:146181..150926Clytia hemisphaericaexon
TCONS_00070906-exon-scaffold_58-1491911889:139146..140092TCONS_00070906-exon-scaffold_58-1491911889:139146..140092Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:139146..150926 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.0963	2.71681	3.16972	3.2073	4.13299	3.12243	5.21955	5.62217	5.27926	5.01716	3.91776	4.11121	3.66822	3.36688	6.01809	5.73149	3.65064	3.84672	2.86381	3.34554	3.78944	3.7722	5.88671	5.82955	2.4823	3.49547	8.93337	6.79343	9.61815	8.76035
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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