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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070984 ID=TCONS_00070984|Name=TCONS_00070984|organism=Clytia hemisphaerica|type=transcript|length=1504bp
CCAGACTATACACAGAGAAcatgatatataaaaaaatgtcgTAAATCTTA
TGTCGtttcaaaaaaatggtttttagaTTAGGAAAGTTTACTAAATTTGT
TTCAATTTACAGTGcatgtcaaaaagaaaaatctttgtgGTTCAAGCTTT
TCATAATGCAAACTGAGATTCCGCCTCTCTCGAAAACACATCCTTCACGA
CAGATTTACatcaacaaaacaaaaaatagagGATGATTAGACTTGTATAA
AAACTTAAAACATCATTGTAATAAAAAGGTATATACAATAAAGATTAACA
ATAAGACATAGAGaagtaaaaacaatgaaaatatcttgaccaaacttaaa
aaattgcgtcccaaaatattctttaaataaCAGACTGTTTAAGTTTGTGG
GCAAATCTTTGACGGGATACTCAAgagaaaagtgaaaagtcaaactggtc
aaacagaaaaacaatctggaaaaaagtaaacaaaagccCAAGATGCTAAC
AAGAAGAATATTTTGTGACAAGGTTAAAGGCTGAAAATGTCGATgtccaa
aatttggaaatagcTCATCCATACCGGAGCAATCGATTGATAACTCATCA
GTCAAGTTAATCAAAGAATTACTAATGATACGAGGTAGTATGGAAGCCAA
CCATTGCGATACCTTACTCAAACGAAGTCAAAGGTCCATTCTACTGTACC
TTTGTCCGACACCGTCCGATAATTGCTTAAAATACTAACAATAATAATAG
TAATTTAAAAAATACTGAGATTCATTAAAATAACGTTATGTATGTGAGGT
AAACATAAAACAACGaaaaaactttattaaaaaaaaaaaacaccgaaaat
aatattaaaaaatttttccttttaatttGAATGCAATTTTTTTATGTGAG
GGACTatcaaaattaaataaacaatATGGGTCATCATTTCATAATTACGT
CAACAACAGGGTTTGAGTCAAAACAATATGGCTATGCAACGCTATTGACC
TCAATGTTAGGCTTTAGAACAGGCCTCGACTCAGCAGCGATGTCAAGCGA
ATCAACTCCATTACTCAAAAGTTCCACGGAAGAAGAATTGGAGGAAGAAT
TAAGAGAAGTGTTCAAAGAAGAATTTGctgcttcttcatttttatcagCT
GTCCATGATCCATTCAGTGAGCCGTTTATAGACGAATCCGGTGAACCTTC
ATCTGGTGAACCGTCATCCGGTGAACCTCCATTGCTAGCGGTCGCTTCTT
GCTGTGCGCGTAATTTGGCTTGTTTCCGCGCGGCCACTAACCTAGAGCGC
GCCTCTCGTTTGACTTTTTCGTCATCTATCGTCTTTGTTTTTGTCCTCGG
TGATTTTCCGGTGGATTTGCGTTTGCCTTTTGGGGTAGAGGAGCTTCCTT
TCTTCGTGTCATCCTGAGATAAAATAATATCGGGAAAATGTGATTAGTAA
TGCGATTAGAATCAACTGTTTGTTGAGACAACACAAACGTGTTTATTTCA
TCTA Run BLAST on NCBI transcript from alignment at scaffold_58:824373..826709- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070984 ID=TCONS_00070984|Name=TCONS_00070984|organism=Clytia hemisphaerica|type=transcript|length=2337bp|location=Sequence derived from alignment at scaffold_58:824373..826709- (Clytia hemisphaerica)
CCAGACTATACACAGAGAACATGATATATAAAAAAATGTCGTAAATCTTA
TGTCGTTTCAAAAAAATGGTTTTTAGATTAGGAAAGTTTACTAAATTTGT
TTCAATTTACAGTGCATGTCAAAAAGAAAAATCTTTGTGGTTCAAGCTTT
TCATAATGCAAACTGAGATTCCGCCTCTCTCGAAAACACATCCTTCACGA
CAGATTTACATCAACAAAACGAAAAATAGAGAAATTAGACTTGTATAAAA
ACTTAAAACATCATTGTAATAAAAAGGTATATACAATAAAGATCAACAAT
AAAACATAGAGGTAAAAACAATGAAAATATCTTGACCAAACTTCAAAAAT
TGCGTCCCAAAATATATTTTTTTAAATAAGAGACTGTTTAAGTTTGTTTT
TCTGGGCAACTCTTTGATGGGATACTCAAGAGAAAAGTGAAAAGTCAAAC
AGAAAAACAATCTGGAAAAAAGTAAACAAAAGCCCGGGATGGGCTGGAGT
TTTTACAAGATGCTTAACTGATTGGTTATTTTTAAACAATAGGAGTGACA
CGTTCTTTAGAAAGTAATAAAATCGTTTGTCTCAACATTTAATGACCAAC
AGAGTCAAAGAACTTGTAAAAACTCCAGCTTGACCCAAAAGCCCAAGATA
CTAACAAGAAGAATATTTTGTGACAAGGTTAAAGGCTGAAAATGTCGATG
TCCAAAATTTGGAAATAGCTCATCCATACCGGAGCAATCGATTGATAACT
CATCAGTCAAGTTAATCAAAGAATTACTAATGATACGAGGTAGTATGGAA
GCCAACCNTTTATTTGACGGTATCAACAATTCCAGACTATACACAGAGAA
CATGATATATAAAAAAATGTCGTAAATCTTATGTCGCTTCAAAAAAATGG
TTTTTAGATTAGGAAAGTTTACTAAATTTCTTTCAATTTACACACTGCAT
GTCAAAAAGAAAAATCTTTGTGGTTCAAGCTTTTCAAAATGCAAACCGAG
ATTCCGCTTCTCTCGAAAACGCATCCTTCACGACAGATTCACATCAACAA
AACAAAAAATAGAGGATGATTAGACTTGTATAAAAACTTAAAACATCATT
GTAATAAAAAGGTATATACAATAAAGATTAACAATAAGACATAGAGAAGT
AAAAACAATGAAAATATCTTGACCAAACTTAAAAAATTGCGTCCCAAAAT
ATTCTTTAAATAACAGACTGTTTAAGTTTGTGGGCAAATCTTTGACGGGA
TACTCAAGAGAAAAGTGAAAAGTCAAACTGGTCAAACAGAAAAACAATCT
GGAAAAAAGTAAACAAAAGCCCAAGATGCTAACAAGAAGAATATTTTGTG
ACAAGGTTAAAGGCTGAAAATGTCGATGTCCAAAATTTGGAAATAGCTCA
TCCATACCGGAGCAATCGATTGATAACTCATCAGTCAAGTTAATCAAAGA
ATTACTAATGATACGAGGTAGTATGGAAGCCAACCATTGCGATACCTTAC
TCAAACGAAGTCAAAGGTCCATTCTACTGTACCTTTGTCCGACACCGTCC
GATAATTGCTTAAAATACTAACAATAATAATAGTAATTTAAAAAATACTG
AGATTCATTAAAATAACGTTATGTATGTGAGGTAAACATAAAACAACGAA
AAAACTTTATTAAAAAAAAAAAACACCGAAAATAATATTAAAAAATTTTT
CCTTTTAATTTGAATGCAATTTTTTTATGTGAGGGACTATCAAAATTAAA
TAAACAATATGGGTCATCATTTCATAATTACGTCAACAACAGGGTTTGAG
TCAAAACAATATGGCTATGCAACGCTATTGACCTCAATGTTAGGCTTTAG
AACAGGCCTCGACTCAGCAGCGATGTCAAGCGAATCAACTCCATTACTCA
AAAGTTCCACGGAAGAAGAATTGGAGGAAGAATTAAGAGAAGTGTTCAAA
GAAGAATTTGCTGCTTCTTCATTTTTATCAGCTGTCCATGATCCATTCAG
TGAGCCGTTTATAGACGAATCCGGTGAACCTTCATCTGGTGAACCGTCAT
CCGGTGAACCTCCATTGCTAGCGGTCGCTTCTTGCTGTGCGCGTAATTTG
GCTTGTTTCCGCGCGGCCACTAACCTAGAGCGCGCCTCTCGTTTGACTTT
TTCGTCATCTATCGTCTTTGTTTTTGTCCTCGGTGATTTTCCGGTGGATT
TGCGTTTGCCTTTTGGGGTAGAGGAGCTTCCTTTCTTCGTGTCATCCTGA
GATAAAATAATATCGGGAAAATGTGATTAGTAATGCGATTAGAATCAACT
GTTTGTTGAGACAACACAAACGTGTTTATTTCATCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070984-exon-scaffold_58-1575043694:826501..826709 | TCONS_00070984-exon-scaffold_58-1575043694:826501..826709 | Clytia hemisphaerica | exon |
| TCONS_00070984-exon-scaffold_58-1575043694:824373..825667 | TCONS_00070984-exon-scaffold_58-1575043694:824373..825667 | Clytia hemisphaerica | exon |
| TCONS_00070984-exon-scaffold_58-1510915933:826501..826709 | TCONS_00070984-exon-scaffold_58-1510915933:826501..826709 | Clytia hemisphaerica | exon |
| TCONS_00070984-exon-scaffold_58-1510915933:824373..825667 | TCONS_00070984-exon-scaffold_58-1510915933:824373..825667 | Clytia hemisphaerica | exon |
| TCONS_00070984-exon-scaffold_58-1491911889:826501..826709 | TCONS_00070984-exon-scaffold_58-1491911889:826501..826709 | Clytia hemisphaerica | exon |
| TCONS_00070984-exon-scaffold_58-1491911889:824373..825667 | TCONS_00070984-exon-scaffold_58-1491911889:824373..825667 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:824373..826709 - |
Blast
The following BLAST results are available for this feature:
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