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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070986 ID=TCONS_00070986|Name=TCONS_00070986|organism=Clytia hemisphaerica|type=transcript|length=1105bp
TACTGAGGAAAAACATCTTGCAGAAACTTTAAACGAATATTCGTTGAAGG
AACCTTGTTTGAGATAGTTGGTTGGTTTATAAGTCACAATGTTCTTCTTC
ACTTTAGGTTTGTTGTTATGGCGACTGAGAAATGTGTCGGCAATGATGTG
TCTCCTTGAACATCCTCAATCTTCTTTCATTAGATCACAGTTTGTGTTGA
GCGGGAAGATCGAAGGAATTGAGGAGAGTGTTTCTCCTTTCGAACCTCGC
AAACTGAATGTCAACATCTACACCATCTACAAACAACCAGATGACAGTTC
CAAAGTGAAAAGAAGTGAGAACTTGGAAGTTCGTATCCACGATCAGTGGA
TGAAGAAAGAAGTCCGGGCAGGCGAAGAATACCTGTTAGCGGGTGCGCTG
TACAACGGACGATATATAGTGACTGGATGTGATTGGGTGCAGAAGATGTA
TTTGTTGAGTCCTGTTCAACGTTGGGGTTTGAAGAGATATTACCAACGAA
ACAAAGAATGTGAAGTGAAAGAAGAAGGATGCGAGAATGGAGAATGCTGC
TTATGGAAAACTAAAGATCTAGCGGCTGCCGAGGTGAAAGCAGACTGTAC
ATCATTGAAAGCGATCTGCATGAAAAGTCCTGGTGGAAAATGTCACTGGT
TTCGGGCGCGTATCGGCCCTTCATGTGTTGAGTAGAGCAGATAGTGCAAC
AAACTGCTGCTGTCAATCACAACCCCCTAATCGAACTTCCCTAAAAGGGA
CTGAACGCCACTGTGTGTTTGAACATTATGAATGAGGGCAAGCGAACAAT
AAATGAAAGTCAAGAAAACTCTAAAGGAGGATAATCATAACTAGCGACTT
TTGATTATTCACTTTTATTCGATATTCagtgtaaagtttttatggtGGCT
ATGAACCCTTGTATTTATCTAAATCTCCTAAAGAATTCTaaccttgaaaa
ctaaattttaaccTTTTTCATAACGGCATCTcaataaatgtttattttgt
ccTTTTGTACAACTTATTTCATATGGTTACCAAATTTCAGGGCttaaaaa
cagatttttgctAATTCAATAACGGTTTTTGTCCAAGTATATccttcaac
cgcca Run BLAST on NCBI protein sequence of TCONS_00070986-protein >TCONS_00070986-protein ID=TCONS_00070986-protein|Name=TCONS_00070986-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MFFFTLGLLLWRLRNVSAMMCLLEHPQSSFIRSQFVLSGKIEGIEESVSP
FEPRKLNVNIYTIYKQPDDSSKVKRSENLEVRIHDQWMKKEVRAGEEYLL
AGALYNGRYIVTGCDWVQKMYLLSPVQRWGLKRYYQRNKECEVKEEGCEN
GECCLWKTKDLAAAEVKADCTSLKAICMKSPGGKCHWFRARIGPSCVE Run BLAST on NCBI transcript from alignment at scaffold_58:837964..840202- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070986 ID=TCONS_00070986|Name=TCONS_00070986|organism=Clytia hemisphaerica|type=transcript|length=2239bp|location=Sequence derived from alignment at scaffold_58:837964..840202- (Clytia hemisphaerica)
TACTGAGGAAAAACATCTTGCAGAAACTTTAAACGAATATTCGTTGAAGG
AACCTTGTTTGAGATAGTTGGTTGGTTTATAAGTCACAATGTTCTTCTTC
ACTTTAGGTTTGTTGTTATGGCGACTGAGAAATGTGTCGGCAATGATGTG
TCTCCTTGAACATCCTCAATCTTCTTTCATTAGATCACAGTTTGGTAAGT
TTGTTGATGCCCCTTCTCATCTTTAATAAGGCTATTATTATACAGTTTCT
GTTTATGGCGTTGTATAATTTCTCAAAAGAATTGTTTTAGAGGGCTTTTT
AATTAACAAATTCTCTGAGCATAGTCGGTGAGAATTTTTTGAGCAAGAAG
GCAGGCTATAACCCAGGAAATTCTCTGAGTGACGATTTTTCTTCCCGATG
TTTTAAAACCTGTGAATCGTTTACAGCGTTTGGCCAGATTTTCGCTCTTG
TTTTCCTCTAGAATGTTTAATAATTACGTGCTGCCAACAAATTGGTATAC
CTTCTCTTATGAGTTAAGGTTTCAAAATATTTCTGACAATTTTGTTTAGT
GTTGAGCGGGAAGATCGAAGGAATTGAGGAGAGTGTTTCTCCTTTCGAAC
CTCGCAAACTGAATGTCAACATCTACACCATCTACAAACAACCAGATGAC
AGTTCCAAAGTGAAAAGAAGTGAGAACTTGGAAGTTCGTATCCACGATCA
GTGGATGAAGAAAGAAGTCCGGGCAGGCGAAGAATACCTGTTAGCGGGTG
CGCTGTACAACGGACGATATATAGTGACTGGATGTGATTGGGTGCAGAAG
ATGTATTTGTTGAGTCCTGTTCAACGTTGGGGTTTGAAGAGATATTACCA
ACGAAACAAAGAATGTGAAGTAAATAGACAGCTCCTTTTCCAAACTCAGA
TAACTGAAAGCTAAACATTTACTAGGTTTCTGTTGATCCTCTAGCGGAAA
GAGTTTCATCTATATAGGTAATATGGGCGCGGAAGTATATCTATATGTAG
AACCCTGCGATTCAGACTAAACATTTACTGCCATACATAACTGAATCCCA
AACACACCCCCGTCTCACAGACCCGGTGGGATTTTATCAGCCAGTGGGGG
TAAAAATAATGAACCAAAATTCGATGGGGATTGGTATTCCCATGGTTTTT
ATGGCTGGGGACTTGAAGTCCATTGTTTTCTAGCCAGAAAATTCAATGCG
GATGAAAGAAATAGCACAATATTTTACAGTGAGGGTTTGCTTATCTGGTT
ATTTTCAGCAGGGACAAAAATGAGAGTATAACTTTCCACTTAGGACGATA
TTTTGGCCAATTTTTCTTGTGGGAAGGGTTCTCAGTGGGTCTGTGAAAAG
GGGTAGCCATGAGAAGGGGGTGTCCAAACAGTTATTGCCATAAATAGCTG
AAAGGCTAAAAAAACAGTTCAAAAAAGACCTTATAACTAAAAGAAACCAC
TATTACTTGAATGAAACTATTCTCTGTGCGATTTTACCAAGGTTACGGAC
TAAGAATCGCTGAATTTAAAACAATTTCAATTTACTTTGAGAAACATCGA
AGTCTTAGGTTATTGTGATTCTATTTGAAAACTAAAACTTTAAAAAAATG
AACACGAAAAATCTATCTCAAAATTAAAAATGTTCTTTTCTTTTACAGGT
GAAAGAAGAAGGATGCGAGAATGGAGAATGCTGCTTATGGAAAACTAAAG
ATCTAGCGGCTGCCGAGGTGAAAGCAGACTGTACATCATTGAAAGCGATC
TGCATGAAAAGTCCTGGTGGAAAATGTCACTGGTTTCGGGCGCGTATCGG
CCCTTCATGTGTTGAGTAGAGCAGATAGTGCAACAAACTGCTGCTGTCAA
TCACAACCCCCTAATCGAACTTCCCTAAAAGGGACTGAACGCCACTGTGT
GTTTGAACATTATGAATGAGGGCAAGCGAACAATAAATGAAAGTCAAGAA
AACTCTAAAGGAGGATAATCATAACTAGCGACTTTTGATTATTCACTTTT
ATTCGATATTCAGTGTAAAGTTTTTATGGTGGCTATGAACCCTTGTATTT
ATCTAAATCTCCTAAAGAATTCTAACCTTGAAAACTAAATTTTAACCTTT
TTCATAACGGCATCTCAATAAATGTTTATTTTGTCCTTTTGTACAACTTA
TTTCATATGGTTACCAAATTTCAGGGCTTAAAAACAGATTTTTGCTAATT
CAATAACGGTTTTTGTCCAAGTATATCCTTCAACCGCCA Coding sequence (CDS) from alignment at scaffold_58:837964..840202- >TCONS_00070986 ID=TCONS_00070986|Name=TCONS_00070986|organism=Clytia hemisphaerica|type=CDS|length=1791bp|location=Sequence derived from alignment at scaffold_58:837964..840202- (Clytia hemisphaerica)
GTGAAAGAAGAAGGATGCGAGAATGGAGAATGCTGCTTATGGAAAACTAA
AGATCTAGCGGCTGCCGAGGTGAAAGCAGACTGTACATCATTGAAAGCGA
TCTGCATGAAAAGTCCTGGTGGAAAATGTCACTGGTTTCGGGCGCGTATC
GGCCCTTCATGTGTTGAGTAGTGTTGAGCGGGAAGATCGAAGGAATTGAG
GAGAGTGTTTCTCCTTTCGAACCTCGCAAACTGAATGTCAACATCTACAC
CATCTACAAACAACCAGATGACAGTTCCAAAGTGAAAAGAAGTGAGAACT
TGGAAGTTCGTATCCACGATCAGTGGATGAAGAAAGAAGTCCGGGCAGGC
GAAGAATACCTGTTAGCGGGTGCGCTGTACAACGGACGATATATAGTGAC
TGGATGTGATTGGGTGCAGAAGATGTATTTGTTGAGTCCTGTTCAACGTT
GGGGTTTGAAGAGATATTACCAACGAAACAAAGAATGTGAAATGTTCTTC
TTCACTTTAGGTTTGTTGTTATGGCGACTGAGAAATGTGTCGGCAATGAT
GTGTCTCCTTGAACATCCTCAATCTTCTTTCATTAGATCACAGTTTGGTG
AAAGAAGAAGGATGCGAGAATGGAGAATGCTGCTTATGGAAAACTAAAGA
TCTAGCGGCTGCCGAGGTGAAAGCAGACTGTACATCATTGAAAGCGATCT
GCATGAAAAGTCCTGGTGGAAAATGTCACTGGTTTCGGGCGCGTATCGGC
CCTTCATGTGTTGAGTAGTGTTGAGCGGGAAGATCGAAGGAATTGAGGAG
AGTGTTTCTCCTTTCGAACCTCGCAAACTGAATGTCAACATCTACACCAT
CTACAAACAACCAGATGACAGTTCCAAAGTGAAAAGAAGTGAGAACTTGG
AAGTTCGTATCCACGATCAGTGGATGAAGAAAGAAGTCCGGGCAGGCGAA
GAATACCTGTTAGCGGGTGCGCTGTACAACGGACGATATATAGTGACTGG
ATGTGATTGGGTGCAGAAGATGTATTTGTTGAGTCCTGTTCAACGTTGGG
GTTTGAAGAGATATTACCAACGAAACAAAGAATGTGAAATGTTCTTCTTC
ACTTTAGGTTTGTTGTTATGGCGACTGAGAAATGTGTCGGCAATGATGTG
TCTCCTTGAACATCCTCAATCTTCTTTCATTAGATCACAGTTTGGTGAAA
GAAGAAGGATGCGAGAATGGAGAATGCTGCTTATGGAAAACTAAAGATCT
AGCGGCTGCCGAGGTGAAAGCAGACTGTACATCATTGAAAGCGATCTGCA
TGAAAAGTCCTGGTGGAAAATGTCACTGGTTTCGGGCGCGTATCGGCCCT
TCATGTGTTGAGTAGTGTTGAGCGGGAAGATCGAAGGAATTGAGGAGAGT
GTTTCTCCTTTCGAACCTCGCAAACTGAATGTCAACATCTACACCATCTA
CAAACAACCAGATGACAGTTCCAAAGTGAAAAGAAGTGAGAACTTGGAAG
TTCGTATCCACGATCAGTGGATGAAGAAAGAAGTCCGGGCAGGCGAAGAA
TACCTGTTAGCGGGTGCGCTGTACAACGGACGATATATAGTGACTGGATG
TGATTGGGTGCAGAAGATGTATTTGTTGAGTCCTGTTCAACGTTGGGGTT
TGAAGAGATATTACCAACGAAACAAAGAATGTGAAATGTTCTTCTTCACT
TTAGGTTTGTTGTTATGGCGACTGAGAAATGTGTCGGCAATGATGTGTCT
CCTTGAACATCCTCAATCTTCTTTCATTAGATCACAGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070986-exon-scaffold_58-1575043694:840009..840202 | TCONS_00070986-exon-scaffold_58-1575043694:840009..840202 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1575043694:839334..839653 | TCONS_00070986-exon-scaffold_58-1575043694:839334..839653 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1575043694:837964..838554 | TCONS_00070986-exon-scaffold_58-1575043694:837964..838554 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1510915933:840009..840202 | TCONS_00070986-exon-scaffold_58-1510915933:840009..840202 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1510915933:839334..839653 | TCONS_00070986-exon-scaffold_58-1510915933:839334..839653 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1510915933:837964..838554 | TCONS_00070986-exon-scaffold_58-1510915933:837964..838554 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1491911889:840009..840202 | TCONS_00070986-exon-scaffold_58-1491911889:840009..840202 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1491911889:839334..839653 | TCONS_00070986-exon-scaffold_58-1491911889:839334..839653 | Clytia hemisphaerica | exon |
| TCONS_00070986-exon-scaffold_58-1491911889:837964..838554 | TCONS_00070986-exon-scaffold_58-1491911889:837964..838554 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:837964..840202 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008191 | metalloendopeptidase inhibitor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008191 |
metalloendopeptidase inhibitor activity |
Blast
The following BLAST results are available for this feature:
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