TCONS_00071008 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071008
Unique NameTCONS_00071008
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1916

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071008 ID=TCONS_00071008|Name=TCONS_00071008|organism=Clytia hemisphaerica|type=transcript|length=1916bp
TAAAGATCTATTttcttgattgaagaaaaagaatatCCATTAATTTTATG
ACGAGATTTTGGAGATAGAtatgatttgataaaaaaaatgtctcaatttt
GTTGTTGGCCCTTTCTCGAACTTTTTAAACCAAGAATGTCTAAAAACCAT
ATTTGCATCCCAGATGTAGAGAATGCAGAATGGCTGAACAAGGTGATCGC
ACAAGTATGGCCCTTCGTTTCCACAATGGTGGGCGACATCTTGAAAAATG
AGGTCGAGTTGGAGATACAGAAAAAAATGCCCAGCTCCATCCCATTACTG
AAGTCCTTCAAATTCCATGAAGCAGATCTTGGAAATCATCCATTAACGAT
TGACGGTGTCAAAGTGTACAAAGATCACTTGCGCGCAGACGAAATCATCA
TGGACATCTGTATCAGTTATGCTGGAGATTTGGAAGTGAAAGTTGGTTTT
GGAGCAATTACTGCAGGAATCACCAAAATCCAGTTGCGAGGCCAACTTCG
TGTGGAATTGAAACCGTTGCTTCCAAGAGCTCCGCTGATTGGTGGAATGA
CCGTCTCGTTCCTCGAAGTTCCgGAATTTGACTTCGATTTGACGAATTTG
TTGAATGTTTTGGATTTACCTGGCGTCAGTTCCATTCTTCACGAATGTTT
GGAGGAAGTGATTCAATCCTTCATCGTGCTCCCCAACAAAGTGACCATTC
CGTTCGCTGATGACCCAGCTGTTCAAAAAGCGCTCCTCCACCAACCTCCA
ATGggcGTTTTGCAAGTGAAGATTATTAGTGGGCGTGATTTGAAGGCGTC
TGATAAGAAAATTTTCAGCAAAGATTCTTCAGACCCTTACGTCATCTGTA
AAGTGGCATCACACAAGCACAAAACAGAAATCCAAGAAGACACATTAAAC
CCTGTCTGGAATGAAACTTTCGTCCTTTTCGTGGACACGTTGATTGGAAC
GAAAATCAAATTTGACGTCTGGGACAGCGATCCTGGAAAAGATGACGACC
TCGGAAAGGCGGACATAAGCATCCTTGATATCGTGgagaaacaaaatttt
aaagaacagAATTTGAAATTGAGTTCTGGCAAAACTGGATCACTGGACGT
GCAATGTGGTTGGTTAACTtttagtgatgacgtcacacAAATGCAAAAGC
CTTCCATGGATCTAACGTGTACAGCAGCTTTGTTTGTTACCATCGTCAAC
GCAAAAGATCTTCCTGTCATCGACTTTGACAAAAACACGTGTAACGCTTT
TGCTGAAATTGAAGTGCAAGATGGAAAAGACTCCAAGACAAAGCAAACAA
AGACACAACGGCACACAACAGATCCAGTTTGGAACGAATCCTTTTTCTTC
ACcatcaaagaaatcaaagaaaactcCAAAACCACTATCAAGATCATGGA
TCATGGATGTGAAGATTCTTTAGGAGAAATGTCTTTCAATCTTAATAATT
TGCTTTCGGAAGACAAAATGACTTGCAAAAAAACCTTCTCGTTAGAGAAC
TCTACCGCTAAAAATCCAACGTTGGCGGTTACTTTGCAATTGAAGGCTCT
TGTCAAAGGAGATGCTGAGACAAAATAAATACCAACACAACTATGGACGA
AATATTTCATCTTATTCAGTCACGTGGGTTTTATCtcaatgaaattttca
tcgCATCTCTAtctgccatatttgttttgatcatACATCCGCCATTTcga
ctttcactttcattttgacTTGAATCTCTCAAACAACATCATTCATTCAA
ACGACCCACCaccattttttttcaatttaataaatttttattggtttttt
taaagatgatcttttttgtaaataaacttaTATAGGGACCATGACTAGTA
GAGTAATATATTACGGgatttaatgaaaataaaaaaacaattattcagac
caaaatttattgaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_58:977787..988830-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071008 ID=TCONS_00071008|Name=TCONS_00071008|organism=Clytia hemisphaerica|type=transcript|length=11044bp|location=Sequence derived from alignment at scaffold_58:977787..988830- (Clytia hemisphaerica)
TAAAGATCTATTTTCTTGATTGAAGAAAAAGAATATCCATTAATTTTATG
ACGAGATTTTGGAGATAGATATGATTTGATAAAAAAAATGTCTCAATTTT
GTTGTTGGCCCTTTCTCGAACTTTTTAAACCAAGAATGTCTAAAAACCAT
GTAAGTTATCGCAAAATTAGCGTTTTTTTTTACGCGCGAAAATATTGTAA
CTTGTTCCTTCAACTTCTTTCCGAAGTGTGCGGATCACACATTTGTAATT
GATGTTTTTTATTGTTTTGTAGATTTGCATCCCAGATGTAGAGAATGCAG
AATGGCTGAACAAGGTATCGACTCTTTATTTTCTGCGCATGCGTGAATGA
TTAGGTTTTAATTCTTGATATGCGTAAGTCATTTTTCTAGCGGAAACACC
CGAAAAAAATCTGGGATTTGACCCCTCTCTGTTACAAAAAATAGAAACAC
GGATGTCAAAATCCGGCTTTTTTCGAGTGCTTCCGTTAAAAAATATGACG
TCATCTTGACTTACGCATATGAAGAATACTCTCTGTACTATCCATTCCTT
ATCGGCATTTTTAAACCCTCGGAACAGTGTCACTCTTCGTCGTTTAGGGT
TTAATCTTCCATATTACGAGCCTATTGATTGAACAGTTTTGCTTTTTTTT
ATTCCAACGATCAAGGAACTCTAACATTAACACTGGAATGGACTTTCGCA
GACTATTTTTGTGAAAGCACCCTTTTCCACCGCTCCTTACTTCTACCATT
TTGAGACACAGGCCTTTTATTCATTATAGTGGTCTTGAATCTAACTTTAT
AGTTGGACTAACGAACTCTTAAATAGACTGGAATATAACTTTCCGCACTT
TATGAACAGGTGATCGCACAAGTATGGCCCTTCGTTTCCACAATGGTGGG
CGACATCTTGAAAAATGAGGTCGAGTTGGAGATACAGAAAAAAATGCCCA
GCTCCATCCCATTACTGAAGTCCTTCAAATTCCATGAAGCAGATCTTGGA
AATCATGTAAGAATATTATAATGGAAAATTTAAGGTGTTACAAAGACCAA
CTGATGGATAGTTTGCTGTTGTTTTGGCATCGAAGGCTTGAGTTTTCAAT
TCAATCCCTTTGGCCTTTTCCGCACGGCGGAAATCATCTTGATTTTTTTT
ACAGCTTTTTAAACTTACCTACACAAATTATTTTATTGTTTTTGCTTCAG
CCATTAACGATTGACGGTGTCAAAGTGTACAAAGATCACTTGCGCGCAGA
CGAAATCATCATGGACATCTGTATCAGGTAAGAAACACACTCTTTACCTC
TAGCCTCTCTTCCTTGGTGTTATCACAAAATTCTCCAACCAAGACATTTG
TTTTTCTCCATTTTAGTTATGCTGGAGATTTGGAAGTGAAAGTTGGTTTT
GGAGCAATTACTGCAGGAATCACCAAAATCCAGGTTGGCTGGTGTTTCAC
ACCAATTTTATAACATTGATATGTTTTGAACTTCAAATCTATCATAAATA
CAGTCTGAATCAAGTTAGCATTTCTTTTCAATTTCGACCTACTGAATCTT
TTTAAGACACCCCTGTCTCACAGCCCAGGTGAAACTTTTTCTTACAGCGG
GGATAGAAATTTTGATTGAAATCTCAATGGGGATAAAAATTCTATCGTTC
CAAGGTTAAAAAATCCAGTGGGGATGGTTTTGGAGTGCAATTAAACAATG
AATTTCGAATGGAGATGAAATCAAAGTCAATTTCTCAATGGGGCTGAAAC
TCTAGGGTATTTTCCCCACCGGGACAAAATTTTTGCCAAATTTTCTATAG
TGGGGCTGGGGCTCCAGCGGGCCTGTGACACAGGGGTGTTTTATGGAATC
ATAATCCTTTTCGCCTATTCGCTTGTTCAATTTTCTTTCTCCAAAGTTAT
CGAGGTTTTTTACTGCCGTCATCATCCATTTCTATCTCATCCAATTTTTT
ACATTTTGAAATTCAGTTGCGAGGCCAACTTCGTGTGGAATTGAAACCGT
TGCTTCCAAGAGCTCCGCTGATTGGTGGAATGACCGTCTCGTTCCTCGAA
GTTCCGGTAAATTATAAAAATTTTAGCCTTTAAATGCTTTCTCTTTTCCA
ACCCTAAGCAAAAGGATTTTTCATTTGATTGTGTAAGCTGGAAAATTTCC
TCGGCCTCGTTCCCTGTGTATTTATCAGATTTTTGAATATTCTCTGGCGT
TTATCAGTAACATAAATAAAGCCTGGAATACACGACAAGGTTGAAATTTC
CTTTAATTTTATTTCAGGAATTTGACTTCGATTTGACGAATTTGTTGAAT
GTTTTGGATTTACCTGGCGTCAGGTAAGTGTTGATTATAAAATCTTCTTG
ATGTTTTAAACTTTGTAGGAGCTTCGATGGCCAAATGTTAAAAACGAGTT
AAGAACACTTTTTTAAGCTTTACATACTCTAGAGCATCTAATTTCATAGG
AAAATGGACAAAATACTCTTAGACTTAAAACTCAAGGCTTCAAAAATTTT
GCATGTTCTTATAAAAAAACGTGTATGTTATTTTCTTTGTTGGTTCGGTC
CAAGGTCATCACAAAAGCTAAAACTTATATTGATATCTCCAGGTCAAGAT
TAGAATGAGCGTTACTCTTTATTGTAAGATCTTGTGTTGAAACAAATAAC
GAATTTCAGTTTCTTCACTTTTTTGCAAACCAAGTTTGAAAAACCAAATG
CAAGTTAAAAACCTATGTTTTTATCCAATAAATGGTGTTTTAAGGTGTTT
AAAAGATGCAAAAAGTGAAACTTTCTACCCCAAATTATGGCCCTCTAATT
TCAAACTACTCGCCTGGACCAATAGACTTGAATGAGTCATTTAAGCTCAT
CAAACAGTGTTTAATCTTCATTTCTTCAGTTCCATTCTTCACGAATGTTT
GGAGGAAGTGATTCAATCCTTCATCGTGCTCCCCAACAAAGTGACCATTC
CGTTCGCTGATGACCCAGCTGTTCAAAAAGCGCTCCTCCACCAACCTCCA
ATGGTAAGACATAACAGACTTCTACTGTACTTTATTTTAAAGGTTTTTGT
TTTTAAATAAGAGTAACATCGTTTGCTTACTCATCACTTTTAATTCACAA
CCTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCCATG
TTCGTTAGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTAGTTACCAACTT
TTCTCGAGATTGGCTCATTCAATTTTTCTGATTTTTTGCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACATCGATGCGTTTCTTAATTGCTTTCTCCGTTCCAATAGATATAT
AAATGGAAATTTAAAATTATACATTACTTCCATTAAATTCTAATTATTCG
TTTTATAAATAGGTAGGTCCATTAAAGTATTACTTGTTCACATTGGATTG
ACACGGATGTGGAGCAAGATTGGTCAGAAAAAAAAGAAAAGAAAAACATT
TTTTGCTTATATCAGCATAATGTAACAATAAGCAGACACTGTCCTGATAT
GAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAGATAAAACCT
TTAACGAGAACTTCCAAACTGGCAGATATTAAATATACTCTAATTATTAA
CACAACAATTCAATCGCAAACAATTCGTCTTACTCTAATTATTACAATAA
CCGTTCCTTTCAAGGTCTCGTTATTAATAAGTTGTTGCTGATTATTGCTG
ATTTTTTTCTTTCAGGGCGTTTTGCAAGTGAAGATTATTAGTGGGCGTGA
TTTGAAGGCGTCTGATAAGAAAATTTTCAGCAAAGATTCTTCAGACCCTT
ACGTCATCTGTAAAGGTTTGTTCGTTGCATCTAATGATATGTTTTTTGTC
AACGTCTCTGTTTTGAATCTTTTTGATTCAGTCAACCTATGAGTATGAAT
AGAAGACCTCCTTCAAGGTCCTCGCATCCGTTAGTGGTTGCCAGCAGCCT
TGTCAACTTGTTGCAGAAATATTTTTATCACATCCCGTAACAGCTTTTAA
CGATGAAAATTCTCCTTTCACATTTTTAGTGGCATCACACAAGCACAAAA
CAGAAATCCAAGAAGACACATTAAACCCTGTCTGGAATGAAACTTTCGTC
GTAAGTGGCCACGTTCTCACGTTTACTGTATTTCTGTATATTTGGTTGAG
TTTAGACGAACTGGATGATATTCCGAGATCTTAGTGCATGACTGCCGGAA
CTGTCCTATGTTATAAGTATTAGGTGCTGCTCCCTCTCAATAGCTTACAC
GATATTTATATTTTATATTTGCGATATTTTAGCTTTTCGTGGACACGTTG
ATTGGAACGAAAATCAAATTTGACGTCTGGGACAGCGATCCTGGAAAAGA
TGACGACCTCGGAAAGTAAGAATACATTACGGTTTCTTGATTAAATAATC
ATCGATGAAATAATTAAGTTAAAAAATACTCTAACCTCTCGAAGCAGTGA
AAAAATGAGTGGTATAATGGAACTGGTTTATTAGCTTTGTCAAGACATAG
TCACTAGTATATTATACGATACTAGCCGGTACCCGGCGTCGCACGCCGGT
TAAGCTGTAGCTGAACGCACTAAAAGTCCTTTGGATGTTGAAGCTGGCTT
AAAAAAGCGATCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAAG
AGACTAAAAGTCATAATTTTAAAACACAAACAAAGCGAAAACGAAAGTGG
TGACACACAGACACACAAAGCACCGCTATTAATATATAGATTCATAAACC
CGAGGTCAATTTTCAAAATCTAAGCCTCGTTATTTTGTTAAGCCCCTTTG
TTCAAAGAGACCAAACATTTGAACTTTGTAAGAACATCCAATCCTAAATG
AAAACTAGACAGGGGCGAGCCAAAGTTTACTGTTTTTATAAAATACCTAT
CTTCTCTTTTCTGTCAGGGCGGACATAAGCATCCTTGATATCGTGGAGAA
ACAAAATTTTAAAGAACAGGTAATGGTTTTCAATCTGTAGTGTAGTGGCT
TTGTTCTCTAGTGGTTCACGCCTAAGTAGATACAATGATTCTAACTTTAC
GATTCCTAAGACAGTCGCCTTACGCTCACTTCATCCGCTTAGCATAGTTA
TTTCCGGACTAGACTCTCGGCTGTTCCCTGATTACTGTTTTTATCCTCGT
TTCGACTAATTTCCCTAGCTTGTGAGTACGAAACACGGCTGTTCTACAGT
CTACTGCAAAGGGAAGCCGTTTATCATCAGCCTGGAAACTAACGTTCGAG
ATTTATCGTGAACGTGATTTCCCATACCGCGTCCCATACAATCTGATAAG
TTGGTTTCTCTTCATTTTTGAAACATTCTTTGTCATTTCACATAAAATAA
TTGTTTTCTCTACCGTGTGCACCAAAAAAAAGTATACAGGTTTGTTGAGA
TATTGTGAGCTTCAGGATTTAAATTTTTTGTTCATTCTTTTTTTATCGTA
TAGAGGATGCTCTAACTTGAATTTTGAGCTATCATACAGTACATTAAATT
TGAAAAAGTAGTTCGAAAGTTATTTGAAAAAAATTGGAAACATAGTAATT
TAGCTTTCCAAAAATGTATAACAAGTGCTTCTAACAAAACAGTCGAGCGA
TTTTACAAAATGCCCTCTACTATAGCTTGTTTTAACATATTTTTAAATTC
CGTAACGTATTTTGATGAACACAGTTGCATTTTTTGGTATTTTTTTGTGT
AAAGAAGGTAAGTGTCAAGCGAAAAGTTTGCTCGCTGTTTTTAATGATTT
TTTGAAATTTCGACATGGAAAAATTTAAATCCTGAAGCTCACAATATCTC
GACAAACCTGTTTTGGTGCACCCGGTAGATTTCTGAGCCAATATGAGCAC
AGAAAACTGTGCTAGGTTTCTCCTGGCAACCGAATCAACGGGTAGGCCAA
GAGCGGAGAGTAGTTTGTTCCGGTAGACCCGTTCCTTATGCTGTGATCCC
AACGTAATGGTCCCATTCCAGCGCGTGTTAACTGTTTCAGTCCCAGTGTT
TTCACAGCTTCTTTCCCGAAACTAAAAATTGCATTTAGAGACTACCTCAA
TCAAGCCTAGGTTTCTCCATGCTATGCATGCTATGCTATGCACAGGCTTC
AATTTCATTCGCCTTGTGTGTACTAACAAGTTTTTGTTTATCTTGCCATT
TTCAACAAATATCTCAATTTTAACAAATTACATTCTGTGAAAAGATAATC
CAGAAAATATTTTGAAAATGAAGATGGAAAGTTAAGAAGGAAAAAAGAGG
AGCTCGTAGGAGCCGTAGAACCATGTTTTCCGTGTTTCAATAAGATTAGT
GCATAATTAAAGCGAAATGAACTTAAAACCCGAGTGCATTTAGATTTTTT
TTGGGACGGAGACTTATGTGAACGTGTGAATGTGGTCTAAATTTTATGTA
CTTTTTTCTTAGAATTTGAAATTGAGTTCTGGCAAAACTGGATCACTGGA
CGTGCAATGTGGTTGGTTAACTTTTAGTGATGACGTCACACAAATGCAAA
AGCCTTCCATGGATCTAACGTGTACAGCAGCTTTGTTTGTTACCATCGTC
AACGCAAAAGATCTTCCTGTGAGTTTTGTCATTTAACTTTTTCTATCGTT
AGATGTCTAGAAAACGAAAAGTCTTTTGCGTTTACAAGGCGCTTAAATAA
AATAGATTAAGCTTTCTGTCACCTAAGATTGAATGAACAATGGACTTACT
GACAAATAAATGGTTTGATAAAAATTTTCCTAAACAAACTGCCTAGATTA
TATGGATGAAAAAACCTTGGTTTTACTTATCAAAGTAACTTGCTAAAATT
CTTAGGTCATCGACTTTGACAAAAACACGTGTAACGCTTTTGCTGAAATT
GAAGTGCAAGATGGAAAAGACTCCAAGACAAAGCAAACAAAGGTCAGTAC
ATATTCGGTTCATCTAGACTAAACGGGTGAAAGACGACGAAAAGTGAACC
AGCGAAAGAAAAGTTTTGTTATAGGTTTTGGTTTTTACTCCACCTAGAAA
TGGATGAGTATTTTTTCATTTAATTGCCACCGCAGGAATCCTAAAGCGAC
CGAGGATAGCATTCATAGCTTCAAGCCTAAGGATAGTTGGACAAATAGCT
CAAAATTTTGCGAAATTGTTTGTCAATTTTCTTAGACCGGTTAAATGGTT
AACCGGTTAAATGGTAGACCGGTATTAAGTTTGTCTTTTTCTTATCCCTA
GAATTGATGAATCTAGGAAATTCCCTTTTTTGGGAAATTACCTTTTCCAT
ACCACAAGTAGTTATTAAGCGCTCCGCGTAGGTTAAACAAACGTGTACAT
TAGAAAAATAACACATGAGAGCATGGACCGTTCTTGGGTTTTGGCCAAAT
TTCAGCATTGTATTTTTATAAAATTATTCTTATAACACTCCCTTGACATA
TTTGTTAGCATTTGAAGACTGAATTTTGTCTCAGATCAGATGAGAAGTCA
AAAATTACTGTAGGGCTAATACCATTCCTTTTGAAAGCAAATTCAACTCT
ATGCGTTTTGCTGCGGTGGAACTTAATGAAAGTTATAGCTAGTTGTAATA
TTTTAATTATTTCTTTCTGTAGACACAACGGCACACAACAGATCCAGTTT
GGAACGAATCCTTTTTCTTCACCATCAAAGAAATCAAAGAAAACTCCAAA
ACCACTATCAAGGTACATATAACCCTTTCGTTCGTTCGTTCGTTCGCTCG
TTCGTTCCACAGAATAGCTTTCTCTGAAGTTTAAACTGTTCAGTCCTTAC
TTTAATCAGATTCTAATGTTATGTTCTGACATGTCTCTTTCATTACGTTT
CTTATTCATGATTTTATTGGTGCAAGCTTCATCCAAGATCCTGGATGATT
TCCATTGTTGCCAAACTTTTATTTGTTTCATCTTTAATAGATCATGGATC
ATGGATGTGAAGATTCTTTAGGAGAAATGTCTTTCAATCTTAATAATTTG
CTTTCGGAAGACAAAATGACTTGCAAAAAAACCTTCTCGTTAGAGAACTC
TACCGCTAAAAATCCAACGTTGGCGGTTACTTTGCAATTGAAGGTAAATT
TGAAACTTCATTATTAATCATTATTGAACAAAATTATATTCAACATAGAT
TCCTTGGGAACCACGGTTCTCCAGAAGAAAATTTTCTATGATGAAAAGGA
AATAGAACTTACCCTTATTCTTTGAAAAATTTGAAATTTTGATGATTTTC
CAATGCAACGAATTTTAAAACAAAACAAAACAAAGGGAGGACTATAACGA
GCCAATAAAGACTTTTTTCCATTTTTTAAAACTCCATCTCACCCTCTTTA
GCTGAGAATCTCTCATCTGGCAACGAGCCAGTAGGATAAAGCATCAATGT
CCCCTTCAAGCAAGGGTTTGAAAAGAAACTGTTTCTCAAATATGCCCTTT
CCATTTTTTTATTTGCTTGATAGGCTCTTGTCAAAGGAGATGCTGAGACA
AAATAAATACCAACACAACTATGGACGAAATATTTCATCTTATTCAGTCA
CGTGGGTTTTATCTCAATGAAATTTTCATCGCATCTCTATCTGCCATATT
TGTTTTGATCATACATCCGCCATTTCGACTTTCACTTTCATTTTGACTTG
AATCTCTCAAACAACATCATTCATTCAAACGACCCACCACCATTTTTTTT
CAATTTAATAAATTTTTATTGGTTTTTTTAAAGATGATCTTTTTTGTAAA
TAAACTTATATAGGGACCATGACTAGTAGAGTAATATATTACGGGATTTA
ATGAAAATAAAAAAACAATTATTCAGACCAAAATTTATTGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044126XLOC_044126Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071008-exon-scaffold_58-1575043694:988681..988830TCONS_00071008-exon-scaffold_58-1575043694:988681..988830Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:988517..988558TCONS_00071008-exon-scaffold_58-1575043694:988517..988558Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:987825..987971TCONS_00071008-exon-scaffold_58-1575043694:987825..987971Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:987554..987630TCONS_00071008-exon-scaffold_58-1575043694:987554..987630Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:987398..987464TCONS_00071008-exon-scaffold_58-1575043694:987398..987464Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:986775..986864TCONS_00071008-exon-scaffold_58-1575043694:986775..986864Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:986508..986563TCONS_00071008-exon-scaffold_58-1575043694:986508..986563Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:985828..985951TCONS_00071008-exon-scaffold_58-1575043694:985828..985951Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:983916..984015TCONS_00071008-exon-scaffold_58-1575043694:983916..984015Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:983631..983701TCONS_00071008-exon-scaffold_58-1575043694:983631..983701Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:983366..983448TCONS_00071008-exon-scaffold_58-1575043694:983366..983448Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:981612..981663TCONS_00071008-exon-scaffold_58-1575043694:981612..981663Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:980013..980168TCONS_00071008-exon-scaffold_58-1575043694:980013..980168Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:979689..979775TCONS_00071008-exon-scaffold_58-1575043694:979689..979775Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:978919..979008TCONS_00071008-exon-scaffold_58-1575043694:978919..979008Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:978538..978690TCONS_00071008-exon-scaffold_58-1575043694:978538..978690Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1575043694:977787..978157TCONS_00071008-exon-scaffold_58-1575043694:977787..978157Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:988681..988830TCONS_00071008-exon-scaffold_58-1510915933:988681..988830Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:988517..988558TCONS_00071008-exon-scaffold_58-1510915933:988517..988558Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:987825..987971TCONS_00071008-exon-scaffold_58-1510915933:987825..987971Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:987554..987630TCONS_00071008-exon-scaffold_58-1510915933:987554..987630Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:987398..987464TCONS_00071008-exon-scaffold_58-1510915933:987398..987464Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:986775..986864TCONS_00071008-exon-scaffold_58-1510915933:986775..986864Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:986508..986563TCONS_00071008-exon-scaffold_58-1510915933:986508..986563Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:985828..985951TCONS_00071008-exon-scaffold_58-1510915933:985828..985951Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:983916..984015TCONS_00071008-exon-scaffold_58-1510915933:983916..984015Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:983631..983701TCONS_00071008-exon-scaffold_58-1510915933:983631..983701Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:983366..983448TCONS_00071008-exon-scaffold_58-1510915933:983366..983448Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:981612..981663TCONS_00071008-exon-scaffold_58-1510915933:981612..981663Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:980013..980168TCONS_00071008-exon-scaffold_58-1510915933:980013..980168Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:979689..979775TCONS_00071008-exon-scaffold_58-1510915933:979689..979775Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:978919..979008TCONS_00071008-exon-scaffold_58-1510915933:978919..979008Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:978538..978690TCONS_00071008-exon-scaffold_58-1510915933:978538..978690Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1510915933:977787..978157TCONS_00071008-exon-scaffold_58-1510915933:977787..978157Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:988681..988830TCONS_00071008-exon-scaffold_58-1491911889:988681..988830Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:988517..988558TCONS_00071008-exon-scaffold_58-1491911889:988517..988558Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:987825..987971TCONS_00071008-exon-scaffold_58-1491911889:987825..987971Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:987554..987630TCONS_00071008-exon-scaffold_58-1491911889:987554..987630Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:987398..987464TCONS_00071008-exon-scaffold_58-1491911889:987398..987464Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:986775..986864TCONS_00071008-exon-scaffold_58-1491911889:986775..986864Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:986508..986563TCONS_00071008-exon-scaffold_58-1491911889:986508..986563Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:985828..985951TCONS_00071008-exon-scaffold_58-1491911889:985828..985951Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:983916..984015TCONS_00071008-exon-scaffold_58-1491911889:983916..984015Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:983631..983701TCONS_00071008-exon-scaffold_58-1491911889:983631..983701Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:983366..983448TCONS_00071008-exon-scaffold_58-1491911889:983366..983448Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:981612..981663TCONS_00071008-exon-scaffold_58-1491911889:981612..981663Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:980013..980168TCONS_00071008-exon-scaffold_58-1491911889:980013..980168Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:979689..979775TCONS_00071008-exon-scaffold_58-1491911889:979689..979775Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:978919..979008TCONS_00071008-exon-scaffold_58-1491911889:978919..979008Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:978538..978690TCONS_00071008-exon-scaffold_58-1491911889:978538..978690Clytia hemisphaericaexon
TCONS_00071008-exon-scaffold_58-1491911889:977787..978157TCONS_00071008-exon-scaffold_58-1491911889:977787..978157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:977787..988830 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.292372	0.245876	0.438354	0.483477	2.10987	3.48967	138.158	148.675	47.4258	57.5622	31.3876	32.5054	27.5211	24.9175	25.6128	36.8498	41.2431	41.8173	25.4092	29.1745	20.1229	20.3073	11.0601	14.499	20.6911	25.3182	6.85482	5.00043	0.621344	0.947599
Blast
[Close]
BLAST of TCONS_00071008 vs. Swiss-Prot (Human)
Match: ESYT2 (Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.449e-62
Identity = 148/485 (30.52%), Postives = 261/485 (53.81%), Query Frame = 1 
Query:  151 ICIPDVENAEWLNKVIAQVWPFVSTMVGDILKNEVELEIQKKMPSSIPLLKSFKFHEADLGNHPLTIDGVKVYKDHLRADEIIMDICISYAG----DLEVKVGFGAITAGITKIQLRGQLRVELKPLLPRAPLIGGMTVSFLEVPEFDFDLTNLLNVLDLPGVSSILHECLEEVIQSFIVLPNKVTIPFADDPAVQKALLHQP-PMGVLQVKIISGRDLXX--XXXXXXXXXXXXPYVICKVASHKHKTEIQEDTLNPVWNETFVLFVDTLIGTKIKFDVWDSDPGKDDDLGKADISILDIVEKQNFKEQNLKLSSGKTGSLDVQCGWLTFSDDVTQMQKPSMDLTC----------TAALFVTIVNAKDLPVIDFDKNTCNAFAEIEVQDGKDSXXXXXXXXRHTTDPVWNESF-FFTIKEIKENSKTTIKIMDHGCEDSLGEMSFNLNNLLSEDKMTCKKTFSLENSTAKNPTLAVTLQLKAL 1551
            +  PD E AEWLNK +  +WPF+   +  + +  +E  ++     +   L +F F + D+G  PL I+GVKVY +++   +II+D+ IS+ G    DLE+K  F    AG+  IQ+ G +RV L+PL+   PL+G +++ FL  P  + + T L N+LD+PG++ +    + ++I +++VLPN++T+P   +  VQ A L  P P GVL++  I  +DL+   +  K   K  SDPY I +V +   ++ + ++ L+P WNE +   V    G +++ +++D DP KDD LG   I +++ VEK+   ++   L     G L ++  WLT   + + + K   D+            +A L + + +A++LP     K + N    +++  G  ++  + + +  T +PVW E+F FF     +++ +  ++   H C  SLG +   L+ LL+ + MT  + F L NS   N T+ + + L+ L
Sbjct:  187 VHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVR----GANTHLSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYF--CRAGVKSIQIHGTMRVILEPLIGDMPLVGALSIFFLRKPLLEINWTGLTNLLDVPGLNGLSDTIILDIISNYLVLPNRITVPLVSE--VQIAQLRFPVPKGVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEALVYEHPGQELEIELFDEDPDKDDFLGSLMIDLIE-VEKERLLDEWFTLDEVPKGKLHLRLEWLTLMPNASNLDKVLTDIKADKDQANDGLSSALLILYLDSARNLP--SGKKISSNPNPVVQMSVGHKAQESKIRYK--TNEPVWEENFTFFIHNPKRQDLEVEVRDEQHQC--SLGNLKVPLSQLLTSEDMTVSQRFQLSNS-GPNSTIKMKIALRVL 655
The following BLAST results are available for this feature:
BLAST of TCONS_00071008 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ESYT21.449e-6230.52Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 ... [more]
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