|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071024 ID=TCONS_00071024|Name=TCONS_00071024|organism=Clytia hemisphaerica|type=transcript|length=475bp
TCAATCtactcaaaattattttttcagcaaGcCTCATTACCATGCGGTCC
ATGTTCCCATGGCAATGATAAGAGAGCAGTGTGTGGAAGTGACGGGAGGC
GTTATTCGGATTTCTGTGCTCTTCAAAAGGTTTCCTGTTTGAAAGGCATT
CCGATCATGGCGGTCAAAGTTGCAGCAGATGACGAGCTCTGTACAGATTG
TAACATCTACTGTGGCCCATCTCACCAACCAGTTTGTGGGATCGATAATC
GAACTTATATGAACGAATGCGTGTTGAGATTCATGGCTTGTCGAAGCAGA
AAAGCCATCTTTATTCGACATTATGGAAGATGTATTTATACTAGTCCAAG
AAGAAACTCATAAACGACAAAAATAACTGTTTCTCTTTTAACCTTTGGTA
TTGAAACGGTTCTAAATATTGTATGATCAAGAAACTGTATGAGGTTAGTC
CATAATTTGAGGTAGATGATCCATC Run BLAST on NCBI transcript from alignment at scaffold_58:1099772..1100745- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071024 ID=TCONS_00071024|Name=TCONS_00071024|organism=Clytia hemisphaerica|type=transcript|length=974bp|location=Sequence derived from alignment at scaffold_58:1099772..1100745- (Clytia hemisphaerica)
TCAATCTACTCAAAATTATTTTTTCAGCAAGGTTAGTTAAATATTTTTTC
GATCTCACATTACTTGGAGATGTTTAAAAATGTAGGGACTGCCAATCTTT
TGGAACAGAATTAGAATTCATGTACTGTAGAAAATTCTTTAAGTAATGCT
TGAAATTTCATTACAATTTATAAAACATTTTTTCAGCCTCATTACCATGC
GGTCCATGTTCCCATGGCAATGATAAGAGAGCAGTGTGTGGAAGTGACGG
GAGGCGTTATTCGGATTTCTGTGCTCTTCAAAAGGTTTCCTGTTTGAAAG
GCATTCCGATCATGGCGGTCAAAGTTGCAGCAGATGACGAGCTCTGTACA
GGTATCTGTTAAGTTTTTCCTACATATTATGCAGTTTGATTCGGAATTGC
AGTGATCAAATTTTTCTTTTGGAGGCTTTTAAATTAATTTTGGGGAAAGG
GGTCGACGTTGCAACGAATTGAATTTCCCACAAACTTTGGGCTCTCAAGT
GTTCAAAATTCATTGCATCTCAAAAAAGCTAGAAAAATTCTACTCAGGAT
AAACTCGTACCCAGGGCCTGATTCTTATTTTTTTATAATTTTGATGGTCT
TAAGAATCGATATGAAAAGCAAATCGTCATAAGGACGAGGTTGTACTAAA
TAATGAGTCATGGAGTATATGCCTTTTTCCTTTCGTTTTCTTCAGATTGT
AACATCTACTGTGGCCCATCTCACCAACCAGTTTGTGGGATCGATAATCG
AACTTATATGAACGAATGCGTGTTGAGATTCATGGCTTGTCGAAGCAGAA
AAGCCATCTTTATTCGACATTATGGAAGATGTATTTATACTAGTCCAAGA
AGAAACTCATAAACGACAAAAATAACTGTTTCTCTTTTAACCTTTGGTAT
TGAAACGGTTCTAAATATTGTATGATCAAGAAACTGTATGAGGTTAGTCC
ATAATTTGAGGTAGATGATCCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071024-exon-scaffold_58-1575043694:1100715..1100745 | TCONS_00071024-exon-scaffold_58-1575043694:1100715..1100745 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1575043694:1100395..1100559 | TCONS_00071024-exon-scaffold_58-1575043694:1100395..1100559 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1575043694:1099772..1100050 | TCONS_00071024-exon-scaffold_58-1575043694:1099772..1100050 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1510915933:1100715..1100745 | TCONS_00071024-exon-scaffold_58-1510915933:1100715..1100745 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1510915933:1100395..1100559 | TCONS_00071024-exon-scaffold_58-1510915933:1100395..1100559 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1510915933:1099772..1100050 | TCONS_00071024-exon-scaffold_58-1510915933:1099772..1100050 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1491911889:1100715..1100745 | TCONS_00071024-exon-scaffold_58-1491911889:1100715..1100745 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1491911889:1100395..1100559 | TCONS_00071024-exon-scaffold_58-1491911889:1100395..1100559 | Clytia hemisphaerica | exon |
| TCONS_00071024-exon-scaffold_58-1491911889:1099772..1100050 | TCONS_00071024-exon-scaffold_58-1491911889:1099772..1100050 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:1099772..1100745 - |
Blast
The following BLAST results are available for this feature:
|
