|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071036 ID=TCONS_00071036|Name=TCONS_00071036|organism=Clytia hemisphaerica|type=transcript|length=297bp
GTCAGATATCAAGAAACTCATCCAGaGGTTGGAGAGAACCGCGCATGCGC
CAAAAGTAATCCTTGTGGAGAAAACGGTGTTTGTGTGGATGCTTTaacaa
ccaatcaaaatcaGGATGGTTACAGATGTGTCTGCAGAGGGATATACAAA
GGCAAACATTGTGAGCAAACAGATCCATGTCTAGCTTTGACATGCGCCAA
TGGTGGAGAGTGCCAAGAAATTGGTGGGAGAGCTATTTGTGTTTGTTCTG
CGCAATGGTTTGGTGCAACCTGCAGTGTTCCTAAACCACAAGGTATG Run BLAST on NCBI transcript from alignment at scaffold_58:1148166..1149400- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071036 ID=TCONS_00071036|Name=TCONS_00071036|organism=Clytia hemisphaerica|type=transcript|length=1235bp|location=Sequence derived from alignment at scaffold_58:1148166..1149400- (Clytia hemisphaerica)
GTCAGATATCAAGAAACTCATCCAGGTAAACTGGCGCTGTGCTTTTTGTA
ATTCAGTTTTTGAGACTCTTTTTGACGACGAGGGAGATTGTCACAATTAA
GCACCCTGTCGTGTGCAGAGTCACTTAGTTTGTATTGTATGCGTTTTATT
TTTCGGTGTCATCCTGTGTGCACTGAGGGCGTTCGTTCAAAACACATAGC
ATGTGACCTCATCTTCTTGCACAGCTCTCCCTCGCTCAATTGGATTGGCT
CAACACCATGTATCTATTAATTATGTTGTTGTCCAACCATTAATTCTGCT
AATGACCTGACTTTGAAATCACAGTCATTGTGTTTAATTATCGAGGCGTC
TTTTCAACAAAATTCCTTTCTATTTGTGAGAATTTTACGACCTCAAAATG
ACAAGGCATGTTTTTATTCCGACCCAGGACTTCGCCTACAATTAGACCTA
CGACAAATAAAGAGTAATGGAGTAACCACGACACTTGACCATTAACTGGT
GATTTTGGTCCCCAATAAAATTCTTTCGTTTTTCTCTCTTCAAATTTTTC
ACTTTCACTTTCGTTTTTACAGGTTGGAGAGAACCGCGCATGCGCCAAAA
GTAATCCTTGTGGAGAAAACGGTGTTTGTGTGGATGCTTTAACAACCAAT
CAAAATCAGGTACTGAAGACGTCTCGTGAAGATTTCATTTCTCCATGTTT
TGTAAAAACCTGTCCTGTTAATTCTTAATGAAAACGATTTTAAACCCTAC
CCGAATAAAAAAGTCAAAAGTAATTTTCTGTTAGTTGAGGCGTGGTTGGT
CCAATTGATGGGCTTTACGTTTTTTATGAAAATATCCAAAATTTTGAAGC
CTAAAAATGTTCTTTACATGTTCCTATTTTCACCATTTTGTGAGTATTTT
TGCTCTATTTTCCTAAGAAAGTAAGTGTTTGGGGACCCTACCTAAAGCCT
TAAAATGCTCTTAACTCGTTCTTAACATTTTGGCCACGGAAGCCTTATGT
TCTTATATATTTTGTTCTTAAAAAAACGGTCAGTTTTTCTCTCCCATCAT
AGGATGGTTACAGATGTGTCTGCAGAGGGATATACAAAGGCAAACATTGT
GAGCAAACAGATCCATGTCTAGCTTTGACATGCGCCAATGGTGGAGAGTG
CCAAGAAATTGGTGGGAGAGCTATTTGTGTTTGTTCTGCGCAATGGTTTG
GTGCAACCTGCAGTGTTCCTAAACCACAAGGTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071036-exon-scaffold_58-1575043694:1149376..1149400 | TCONS_00071036-exon-scaffold_58-1575043694:1149376..1149400 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1575043694:1148742..1148830 | TCONS_00071036-exon-scaffold_58-1575043694:1148742..1148830 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1575043694:1148166..1148348 | TCONS_00071036-exon-scaffold_58-1575043694:1148166..1148348 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1510915933:1149376..1149400 | TCONS_00071036-exon-scaffold_58-1510915933:1149376..1149400 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1510915933:1148742..1148830 | TCONS_00071036-exon-scaffold_58-1510915933:1148742..1148830 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1510915933:1148166..1148348 | TCONS_00071036-exon-scaffold_58-1510915933:1148166..1148348 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1491911889:1149376..1149400 | TCONS_00071036-exon-scaffold_58-1491911889:1149376..1149400 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1491911889:1148742..1148830 | TCONS_00071036-exon-scaffold_58-1491911889:1148742..1148830 | Clytia hemisphaerica | exon |
| TCONS_00071036-exon-scaffold_58-1491911889:1148166..1148348 | TCONS_00071036-exon-scaffold_58-1491911889:1148166..1148348 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:1148166..1149400 - |
Blast
The following BLAST results are available for this feature:
|
