TCONS_00071057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071057
Unique NameTCONS_00071057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2752

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071057 ID=TCONS_00071057|Name=TCONS_00071057|organism=Clytia hemisphaerica|type=transcript|length=2752bp
TTAAAAGGTAACAATAAAAATGGAAACAGGAacagaagaatatttttggg
tGCAATGCGAGTATCCACAATGTATGAAATGGAGAAAGCTGCTTTCTGGT
GTGCAAGATGAGATAAAAAATATCCAATGGTATTGTCACATGAACCCTGA
TAAAGCTTACAGTTTCTGCGATGCTCCTCAACAGAAAATGCAAGTCAAGA
AAGGGGAAACTGTCGTGTTTAGTGAATTGGAGCTTGGATCTTTGGTCATG
GCGAAAATGGCTGGTTATCCTAGttGGCCAGCAATCATAACAAAAGATCC
AGCAGAACCTGAGGGTAGTCATATAATTCGCTACCAGGATGGAACAAATG
ATCCTAAATATTATCATGTGGAATTTCTCGGTCAAATGCATACCCATGCA
TGGATCTCTGCCAGACAAGTTCAGATATACAATACGTCCTCTGGTATCCT
TGTGTTCGATGAACGggcaatgaaaaagaagaaattgaaagaagaatttt
tgaaatcaaaacaagaagCTTCAacttttatgaatttttcaCCAGAAGAA
AGATTGAAGAGGATTATTTTTCAATGGAAGGAACCTCCTAAACCTGTCAG
GGACATTGGCACTGCAGGGCCAAAActaaaagtgaaatttccagGGCCTT
CTAAAAGGAGGGGAAGAAAGCCCAAAGAAAAACCATCACATGAAGATGAT
CAAGAAGTACCGACACTCGATAACCAAAACATTGTACAACAACACGATTT
AAGTCAATTCGAAACTAGAATGATGAATATTAATGGAACATTATGTCCAG
TCTTAGTTCCGCAAAGTACTTCCAGTTTCCAAAATTACCAATCACTTCCA
CAAACTCCAAGCTGGAACATTTGGGGACAAGCAGCTTCCAAAAATCCACC
AGCCTCTCCTTATAATGTGTTCGATTTCAACAATAATGGCAACACTGCCC
CACAAAGACCATCAACTGATCAGAAAAGTTTACAAAACGCAATGAGGGTT
AAAAGACTACAAAGCCCAATGGCAGCTGCCAATAGATACAAAAGTGTTGT
CCCTGTAAATAGATCAAAACCAATCTTAAAGAAACGTACCAAAGAGTCAG
TTCCAAAGAAGAAAACTAAGCAAGAGGCAAAAGAGGAAGGTTCAGCTCAA
ATAACTACATTTGAAAATGAGGAGAGTTTCTGGAAAGAATTCAAACCATT
TTGGGAAGATTGTATAAAGAgaaatataaatgaaaagaaaatgagTTATG
TTGTTAAGTGGCATGGGAAGAAAATCAGCCTGTTCAAGTTTTATCAAACG
GTTCAACATGCAGGCGGCTATAAAGCGCATCTTGCTCCAGTTCGAACAAG
AAAGAAAGTaTCCATTGCTAGTCAAAAAGAGACAAGAGGAAAAGGCTAAA
GCAGCAGAATTGGAGCAGTTGGCGAGGACCCAATCCACTTTACCAGGAGG
TGGGCTAGCTATTGTACCACGACAAAGCCCTGTCTATCTGCCTGAGGATT
TGGGATTACCGCAATCTTTGAATGTGTTGGATTCTTGTGAAGATGGATCC
TTACAACTACCAGCATTGAATAGCACTGTCGGTGACATCTTGAAAGGACT
GGCACCCTCCACACAAAAGAAATCCAAACCAAGTTTAGTTGACCTTCCAA
GTTCAAACCCAGATTCACCAATGTTTTGCTTTTCTCAAGAATCGCGAGCC
TCTTCTTCGCCAACCTTACCTTCGGAGATCGGCATGGATGCGGCCCTCCT
TCAAATCAACACATTAGAAGGTGAACTATCAACTCTGGGAGGCCTTGATG
ATGTCGGACAAGATCAATCTCTGCCCGAAGATGTTTTCTTAGataacAAG
TCAACGCCCGCTTTAGAAGAACAAAACGAACTCAAAGCATATCAACCAGT
GAGTGGTTCATCAACACAAGACTCTGTTGAATTTGATGCAGTGATGGGCG
AACTAACTGATCTTGAAGACACTCTACTAGACATGGCAGGAGATCTTTTG
GGAGGCACAAAGCTCCCCAGTTGAGGGAGAATTGCGAGCTACTGGAGTAA
GTTTTGGAGGGAGTTGGGAGTTTTGTGTATCTATATACCAGTGcgatcaa
aaagatttttaaagctAACTTTTTCAAATGAGGCTATGCAGCATTTATTA
CTCAACACTTTAGTACCGAGGAACTGGACTGAGAGTAAAGCTTCAGAGGG
TAAGTGTCAGTTTGAAGATAACCATTTTTTAGGCTCGATAATAGTCAGAA
CCTGAAATATTGAAGCCTTTGAgcagaatcttttttttttgtcttttacg
CGCCCGATTTTGAGTAGTGAAAATCTTCtgttacaagttttcaaaagtCA
CAAGTTTGCAGGATTTCTATTGTTGTTATATGTATGTATTACCAGACGTG
AATAGTGATGGTATAGTTTTTTAGCTTTGTAGATTTTAATTAATAGAGTC
ttcagattttttaaatttgatagattttccagtatttttattagtttttc
agaatatttaagAGAATTGAGTTGTAAATTGTTAAGAATATGAATTTTAC
CAGTAGTGTTTGCGTTACTTCTGATTAAATTGATcactgatatttttgaa
aactcaccCTTGCCCTTATTACCTCGATCAGTTTGAGTGTGAACTTTTCC
CTTGATTCTTTACAACTCCTTTATTCACTATCTTACCATCTCCTTCTAAC
TACCCACTTTCAACTTTCAGTTTTTACAGAACCCAGTCGTTTGagattaa
ag
Run BLAST on NCBI

transcript from alignment at scaffold_58:1350178..1357172-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071057 ID=TCONS_00071057|Name=TCONS_00071057|organism=Clytia hemisphaerica|type=transcript|length=6995bp|location=Sequence derived from alignment at scaffold_58:1350178..1357172- (Clytia hemisphaerica)
TTAAAAGGTAACAATAAAAATGGAAACAGGAACAGAAGAATATTTTTGGG
TGCAATGCGAGTATCCACAATGTATGAAATGGAGAAAGCTGCTTTCTGGT
GTGCAAGATGAGATAAAAAATATCCAATGGTATTGTCACATGAACCCTGA
TAAAGCTTACAGTTTCTGCGATGCTCCTCAACAGAAAATGCAAGTCAAGA
AAGGGGAAACTGTCGTGTTTAGTGAATTGGAGCTTGGATCTTTGGTCATG
GCGAAAATGGCTGGTTATCCTAGGTATGGCGATTCTGATTTTAGGGCTAT
TCCAAGAAATTGTCAACCACAATTGGAGTTTATAAGCGATTGAAACGCCT
CGGACCGGGTTGCAGTGCTCCTTACTGGCTATCCAGTCAAAAATAAGCGT
GAAATAATGCACCCCTTCCTCTTGAATGGCCGCTTAGAAATTTTTATTTT
CAAATGGTTGTGAATCGTGTCATCAAAATATAGTTTTGGTAAAATTTGAT
CAAACTTAAATTTTTGTCTTTTTTTTTATTAAGTTGGCCAGCAATCATAA
CAAAAGATCCAGCAGAACCTGAGGGTAGTCATATAATTCGCTACCAGGAT
GGAACAAATGATCCTAAATATTATCATGTGGAATTTCTCGGTCAAATGCA
TACCCATGCATGGATCTCTGCCAGACAAGTTCAGATATACAATACGTCCT
CTGGTATCCTTGTGTTCGATGAACGGGCAATGAAAAAGAAGAAATTGAAA
GAAGAATTTTTGAAATCAAAACAAGAAGCTTCAACTTTTATGAATTTTTC
ACCAGAAGAAAGATTGAAGAGGATTATTTTTCAATGGAAGGAACCTCCTA
AACCTGTCAGGTAAGTTTCCCCTGACGAAGACACATGTTTTCAAAAGTCT
TCTATGTTTTTGCAACATCCTTATTTTGAAATGTCGAATGGGTGATATTT
TCAAGTTTGATATCTGTTTTAGGGACATTGGCACTGCAGGGCCAAAACTA
AAAGTGAAATTTCCAGGGCCTTCTAAAAGGAGGGGAAGAAAGCCCAAAGA
AAAACCATCACATGAAGATGATCAAGAAGTACCGACACTCGATAACCAAA
ACATTGTACAACAACACGATTTAAGTCAATTCGAAACTGTAAGCTTATAT
AATTTCAACTGAAATCCGACGTTATCTGACGAAGTTTTATATTATTTCTG
ATTCATTGATTTGGACTTTGGGTTTTTCATAAAAATCAGCTTAAACCCTT
TACTTTATTTTTGCATTAGAAAAATATGACAAACGAACATATAATAATCA
GAGGGTCACGAAATTAATATAACAACAGTTGCAGTTTGGGACCTTTTAAA
TGTAACCAATAATCCTTTTCAATTTAATCAAGGTATTTTTCCACTGTTTA
CTTTTACATTTCACTTTCAATCAATTTTTTCCTTGCAGAGAATGATGAAT
ATTAATGGAACATTATGTCCAGTCTTAGTTCCGCAAAGTACTTCCAGTTT
CCAAAATTACCAATCACTTCCACAAACTCCAAGCTGGAACATTTGGGGAC
AAGCAGCTTCCAAAAATCCACCAGCCTCTCCTTATAATGTGTTCGATTTC
AACAATAATGGCAACACTGCCCCACAAAGACCATCAACTGATCAGAAAAG
TTTACAAAACGCAATGAGGGTTAAAAGACTACAAAGCCCAATGGCAGCTG
CCAATAGATACAAAAGTGTTGTCCCTGTAAATAGATCAAAACCAATCTTA
AAGAAACGTACCAAAGAGTCAGTTCCAAAGAAGAAAACTAAGCAAGAGGC
AAAAGAGGAAGGTTCAGCTCAAATAACTACATTTGAAAATGTAAGGAATC
ATGTTATTGTTTTCTTTGTATAAAATGAAACCTTTCATTTTGTTCATTTT
AATTTGATTCCCATTGGAGAAGGCCAATTGGGGGATCGTTATTCTCCTAG
GAAAAGGAATCTTTTCACAGTTCAAGATTGTCCAATTCATACCAGCAAAG
TGAACAAGTTGCGAGGATTAAAAACTTAAAGTAATTGTGAAATTAACCTT
TAAATCATTCAGTACATCTAACGATTATATAAACATGAAGCTTTAAGTAA
TGTACTTTTAGATGTTTTTTTAGACAAATATTTTAAGTTAGATTAAAATT
AACTTTAATTCTTTTTCGTCATATCATTTCCAGGAGGAGAGTTTCTGGAA
AGAATTCAAACCATTTTGGGAAGATTGTATAAAGAGAAATATAAATGAAA
AGAAAATGAGTTATGTTGTTAAGTGGCATGGGAAGAAAATCAGCCTGTTC
AAGTTTTATCAAACGGTTCAACATGCAGGCGGCTATAAAGCGGTGCGTAT
GATACTACAGTTGACTCTCTCTAATTCGATCTTCAAGGGATCAAAGTTTT
ATTCGAATTAGAGAAAGATTCAAATTACAGGGAGAGTAATTTTTAAGCCA
CCTTTAAGCCGATGGGGACCAATATTTTGGTTCGAATTAGAGAGAGTTGA
CTTTACTGGACTGTACTCTATCGAAAAAGCATTTTGCTGTACTTTTATCA
AAATGCCATTAAAAAGAAAGTCTTTACAATAGAATGCTGGCTGAATGTCG
TCAGAACATCGCACTTATCTCAAGTCAGCGTATATCTTCACTGTATTGTT
TTTGTCATTATGGAGACAGATATCTGGATTGAGACTATGTTCACACATAA
GGCTTTCATATCGGTTCAAAACGGATTAGAAGTGACGTCAAGTCTGTATT
TGGCCAATAGAACAGTTTCATTTCATCTCAGAACGATGCGAAACCAAATT
TTGTGAACCTGATCCTATTTAAGGTCTAGAAATCCTTTTTTCATCTGAAG
CCATATAATTTTTCATGCTTCGTTCGTATTCTCAGTGTAATAAGTATTTT
ATCTTAATTAAAAGCTAATTGTATTTTTTGTTCCAAAGCTTATTGACTTT
AATAAGAAATTAGTAATCAATCAAATCAAATTAGTAGTAATCAATAATTT
CAGGCGACCAGTCATTGGAAGATTTGGACAAATATTTGTTGCGAAGTCAT
CGGAAAGATGTTTGTAGATAATACGTTTGCTACACTCAAGAAGGCTTACA
GAAAGTAAAGTTCATTTCCTTGCTTCTTTCTCTCAGTTTGTTAGTCTGTT
GAAAGAGCTATTCAGAATTTCAGGGCGCTTGAAAAAATAGTGCTAGGCTG
TTATATAGTTTTATCGAGGATTGTTGAGTACATATAGAACATCATAGATT
AGAATAGGATTCAAGACAAGACTTCTCCGTAACCAATCCCAATTTTTTTA
TAGCATCTTGCTCCAGTTCGAACAAGAAAGAAAGTGTAAGATCAAATTTT
TTTCATTTGCGAACCTAACCTTCCCCCACTACAAAACAAGTGGAATGACC
TACCATACGTGCGGCCTTTAAGGGTTTATTTTCCAAGCTTCCCAAAGTGC
ACTGTAAGGGTTGAAATCAGCAAAGATGAGAAAAATTGCACTCTAAGGGT
GTAAGATTTCGACAAGCTGACAATATTTGGCCTGAAAATGGTCAAAATTT
ATAAAAAAATGCACCAAATTTAGAAAAAATTCTTCTGCATTGTAAGGGTT
CGGTTTCAAAGGCCTAATTTTGGGCCGCCCGTATGGTCGTTTTTGAATCG
AGGGCCCCCTCCCCCGGGGGAATGGAAAATTAAATAACGCTTTTAGAATG
AACGAGCCTCTGACGTTGAAGTTCAGAATACGTCATCGGAAAAAAAGGTT
ATTGATTTTTTCTTTCGAGCTCGATTATGATTATTTTTAAGACACCGACC
TTTTTATTTTACCTGTAACATCCAAAAGAGAAAAAATGTCTATCTGCAAG
CAAAGAATTCGAGTGGTTGGCGGGATTCCTGTCTAATAAATGGAATTTTT
GTTTTGAATAGATCCATTGCTAGTCAAAAAGAGACAAGAGGAAAAGGCTA
AAGCAGCAGAATTGGAGCAGTTGGCGAGGACCCAATCCACTTTACCAGGA
GGTGGGCTAGCTATTGTACCACGACAAAGCCCTGTCTATCTGCCTGAGGA
TTTGGGATTACCGCAATCTTTGAATGTGTTGGATTCTTGTGAAGATGGAT
CCTTACAACTACCAGCATTGAATAGCACTGTCGGTGACATCTTGAAAGGA
CTGGCACCCTCCACACAAAAGAAATCCAAACCAAGTATGTATGATTCCTT
ACAAATTTCAGAGTGTTTTGCTCCAAATTCCTTCGTATAAGTTAATGAGA
ATATAGAATTTTGATCAGAATGCGAATTTAGAAGTAACTCTTATCACAAT
GAAAAAGATTTTCTGAGTGCTTATCAATCAACTTCAAAACAACATATTCT
CTTTATCATTTAGGTTTAGTTGACCTTCCAAGTTCAAACCCAGATTCACC
AATGTTTTGCTTTTCTCAAGGTAAGAAGTTCACCCTCTTTGATTAAATCA
CTGGACAAAGATATAAGATGCTCTTTTGGAGTACAATTGACGATTGGCCA
CGAGTAATAAGGAGACGGAGAAAGTTGTACCCATAGTACGAGAATCAAAT
TAAAATTTTATCCTTGTTACGAGTGATTTACCGTTCATTGTACGAGTTTC
GACCGACATGTGCGATTTCTGAATAATTGTCACCTTTTTCCATTTACACG
CAAAGGTGCTCTCAAAATCTTTCTCGATCAATCAAATTGGACGTTGATTA
CTGAGATAAACTTGTGTGGAATTTCTGTAAACATTTCGCTGAATTAGGAA
TTGAATTAGGATGAGGATGAAATGTTCATGTTTATTGACTTTTAGAATCG
CGAGCCTCTTCTTCGCCAACCTTACCTTCGGAGATCGGCATGGATGCGGC
CCTCCTTCAAATCAACACATTAGAAGGTGAACTATCAACTCTGGGAGGCC
TTGATGATGTCGGACAAGATCAATCTCTGCCCGAAGATGTTTTCTTAGGT
GAGGCTGTTTTCAAATGAGCCTCTTTTTATTTTGAATTATTTTTCACCAC
AGATTAAATGGCTATCGATCTTCGCAGTTTTCTTTTCATACCGCGCGTCT
GGTCACTTGTTCATTTCACGATCGATTAACTATTAGCTAGTTAGTTCATA
TAAATATTTGGGGATACGTAATTAAAATGTTTCACATTAACAATATTTTT
TTAGATAACAAGTCAACGCCCGCTTTAGAAGAACAAAACGAACTCAAGTA
AGCGATTTCATTCAAGCTTTCAAAACTGATATTTTCGATTCTTTCAGTAA
GCTTTGATCATTTCAGGTATCAGATTTGAATTCTTTTTAAGTGCGAAGTA
TGACAGTTTCATTTCAAATCAGCTGCCCTTAGTACCTATTTTAGTATAAA
CTTGATGGATTTCAAATTGGACAACGTAGCTTTTTTAACGTTCTTCAGGT
ATTGGTTTAAAAGAGTTTTTTAAAAATCGGACACTTTTAACAGCCGGACA
CTTTCTCAATAGAGCATATCAACCAGTGAGTGGTTCATCAACACAAGACT
CTGTTGAATTTGATGCAGTGATGGGCGAACTAACTGATCTTGAAGGTATC
CTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCA
GTATCCTCAAGTATGACACTTTTCAAGGTAGTGAAAGGTCTTCCAGTCTT
TCTCTTCGAGTCGGGTGACCACATCAATAGCTGCGAGGCGGGCTCTTCTC
GACGTGCTACGTGACCGGCGAGAGCAAGTCGACGTTTTCGTATTGTAACT
CTCGTATTGACACTTTCTCAATAGAGCATATCAACCAGTGAGTGGTTCAT
CAACACAAGACTCTGTTGAATTTGATGCAGTGATGGGCGAACTAACTGAT
CTTGAAGGTATCCTTATATAACACAATCATTACAGTTTCAAATTTTTTTC
TTCCTTTTTTGCTTGAGGATCTGAAAGTGTTCATTCTTTAACAGAGTGAC
TTTAATAATGCTTAATCCTTTCAGTTCCAGAGCTTTGAACATTTTGCGTC
AGCGCATAGTCTCTCGCTAGAATATTATATAGTAAAAGACATCGGTTAAG
GGGTAAAGGCGCCCGCAAACCAACCAAAATTTCATGCTCTTTCATATAGT
AGCTACGAGAGCTCCGGAGATATAGCCCTATGATGCTGGGTCCGCGGGTC
TCCGGGTCTCCGGGCCTGAATGGGTTAAATTCTTAATCTTATTTCTTGCT
TTTGCTTTCAGACACTCTACTAGACATGGCAGGAGATCTTTTGGGAGGCA
CAAAGCTCCCCAGTTGAGGGAGAATTGCGAGCTACTGGAGTAAGTTTTGG
AGGGAGTTGGGAGTTTTGTGTATCTATATACCAGTGCGATCAAAAAGATT
TTTAAAGCTAACTTTTTCAAATGAGGCTATGCAGCATTTATTACTCAACA
CTTTAGTACCGAGGAACTGGACTGAGAGTAAAGCTTCAGAGGGTAAGTGT
CAGTTTGAAGATAACCATTTTTTAGGCTCGATAATAGTCAGAACCTGAAA
TATTGAAGCCTTTGAGCAGAATCTTTTTTTTTTGTCTTTTACGCGCCCGA
TTTTGAGTAGTGAAAATCTTCTGTTACAAGTTTTCAAAAGTCACAAGTTT
GCAGGATTTCTATTGTTGTTATATGTATGTATTACCAGACGTGAATAGTG
ATGGTATAGTTTTTTAGCTTTGTAGATTTTAATTAATAGAGTCTTCAGAT
TTTTTAAATTTGATAGATTTTCCAGTATTTTTATTAGTTTTTCAGAATAT
TTAAGAGAATTGAGTTGTAAATTGTTAAGAATATGAATTTTACCAGTAGT
GTTTGCGTTACTTCTGATTAAATTGATCACTGATATTTTTGAAAACTCAC
CCTTGCCCTTATTACCTCGATCAGTTTGAGTGTGAACTTTTCCCTTGATT
CTTTACAACTCCTTTATTCACTATCTTACCATCTCCTTCTAACTACCCAC
TTTCAACTTTCAGTTTTTACAGAACCCAGTCGTTTGAGATTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044145XLOC_044145Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071057-exon-scaffold_58-1575043694:1356900..1357172TCONS_00071057-exon-scaffold_58-1575043694:1356900..1357172Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1356313..1356639TCONS_00071057-exon-scaffold_58-1575043694:1356313..1356639Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1356035..1356200TCONS_00071057-exon-scaffold_58-1575043694:1356035..1356200Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1355333..1355734TCONS_00071057-exon-scaffold_58-1575043694:1355333..1355734Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1354831..1354989TCONS_00071057-exon-scaffold_58-1575043694:1354831..1354989Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1353838..1353869TCONS_00071057-exon-scaffold_58-1575043694:1353838..1353869Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1352989..1353261TCONS_00071057-exon-scaffold_58-1575043694:1352989..1353261Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1352753..1352809TCONS_00071057-exon-scaffold_58-1575043694:1352753..1352809Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1352225..1352377TCONS_00071057-exon-scaffold_58-1575043694:1352225..1352377Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1351976..1352018TCONS_00071057-exon-scaffold_58-1575043694:1351976..1352018Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1351628..1351710TCONS_00071057-exon-scaffold_58-1575043694:1351628..1351710Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1575043694:1350178..1350961TCONS_00071057-exon-scaffold_58-1575043694:1350178..1350961Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1356900..1357172TCONS_00071057-exon-scaffold_58-1510915933:1356900..1357172Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1356313..1356639TCONS_00071057-exon-scaffold_58-1510915933:1356313..1356639Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1356035..1356200TCONS_00071057-exon-scaffold_58-1510915933:1356035..1356200Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1355333..1355734TCONS_00071057-exon-scaffold_58-1510915933:1355333..1355734Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1354831..1354989TCONS_00071057-exon-scaffold_58-1510915933:1354831..1354989Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1353838..1353869TCONS_00071057-exon-scaffold_58-1510915933:1353838..1353869Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1352989..1353261TCONS_00071057-exon-scaffold_58-1510915933:1352989..1353261Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1352753..1352809TCONS_00071057-exon-scaffold_58-1510915933:1352753..1352809Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1352225..1352377TCONS_00071057-exon-scaffold_58-1510915933:1352225..1352377Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1351976..1352018TCONS_00071057-exon-scaffold_58-1510915933:1351976..1352018Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1351628..1351710TCONS_00071057-exon-scaffold_58-1510915933:1351628..1351710Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1510915933:1350178..1350961TCONS_00071057-exon-scaffold_58-1510915933:1350178..1350961Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1356900..1357172TCONS_00071057-exon-scaffold_58-1491911889:1356900..1357172Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1356313..1356639TCONS_00071057-exon-scaffold_58-1491911889:1356313..1356639Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1356035..1356200TCONS_00071057-exon-scaffold_58-1491911889:1356035..1356200Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1355333..1355734TCONS_00071057-exon-scaffold_58-1491911889:1355333..1355734Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1354831..1354989TCONS_00071057-exon-scaffold_58-1491911889:1354831..1354989Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1353838..1353869TCONS_00071057-exon-scaffold_58-1491911889:1353838..1353869Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1352989..1353261TCONS_00071057-exon-scaffold_58-1491911889:1352989..1353261Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1352753..1352809TCONS_00071057-exon-scaffold_58-1491911889:1352753..1352809Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1352225..1352377TCONS_00071057-exon-scaffold_58-1491911889:1352225..1352377Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1351976..1352018TCONS_00071057-exon-scaffold_58-1491911889:1351976..1352018Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1351628..1351710TCONS_00071057-exon-scaffold_58-1491911889:1351628..1351710Clytia hemisphaericaexon
TCONS_00071057-exon-scaffold_58-1491911889:1350178..1350961TCONS_00071057-exon-scaffold_58-1491911889:1350178..1350961Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1350178..1357172 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.473096	0.432843	0.363312	0	0.693026	0.393975	0.358218	0.59611	0.265627	0.47327	0.600711	0.432049	0.468562	0.698594	0.326383	0.328395	0.612674	0.490957	0.533893	0.395732	0.209217	0.262131	0.174679	0.408607	0.26495	1.07452e-06	0.459115	0.316445	0.309693	0.504846
Blast
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BLAST of TCONS_00071057 vs. Swiss-Prot (Human)
Match: ZCPW2 (Zinc finger CW-type PWWP domain protein 2 OS=Homo sapiens GN=ZCWPW2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.400e-21
Identity = 62/181 (34.25%), Postives = 94/181 (51.93%), Query Frame = 2 
Query:   47 WVQCEYPQCMKWRKLLSGVQDEIKNIQ-WYCHMNPDKAYSFC-----DAPQQKMQVKKGETVVFSELELGSLVMAKMAGYPSWPAIITKDPAEPEGSHIIRYQDGTNDPKYYHVEFLGQMHTHAWISARQVQIYNTSSGILVFDERAMXXXXXXXXXXXXXQEASTFMNFSPEERLKRIIF 571
            WVQCE   C+KWR L S    ++ + + WYC MN D  Y+ C     D P++    + G  +V+S+L LGSLV+ K+  +PSWP I+   P   +G ++    DG  +   YH+EFLG  H+ +WI A  V  Y+ +        +  K K  K+ +  + QEA     +S E+RL+    
Sbjct:   30 WVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEEDFPEESQLHQCGFKIVYSQLPLGSLVLVKLQNWPSWPGILC--PDRFKGKYVTYDPDGNVEE--YHIEFLGDPHSRSWIKATFVGHYSITL-------KPEKCKNKKKWYKSALQEACLLYGYSHEQRLEMCCL 199
The following BLAST results are available for this feature:
BLAST of TCONS_00071057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZCPW25.400e-2134.25Zinc finger CW-type PWWP domain protein 2 OS=Homo ... [more]
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