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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071130 ID=TCONS_00071130|Name=TCONS_00071130|organism=Clytia hemisphaerica|type=transcript|length=611bp
TAATGCGATGCTTATCAGAAAATAACTTAAATGAACTTGATGGTCTGGAT
GATTAGCTCACAGCAAACGAAAAAGTGACTGGTCCACGCTCCTGCCGAAA
GCTAAATCGATAGTATATCTATAATTTCATCTCTTATATttgttgatctt
tttttttttaaagaagttatttttttgtgttgttcttctatatttttttt
atttaaacccagttgatatttttaaaaagaaaaagtattttgGACGTTTT
CGTGTCTAAAagatatgttttattttatttctatattaacgtattttcta
tatttacaaagatttttgaagaGAGTAGATATTTTTAACACCTCGtacat
ttgaaaaattcaaagaaaatctagcaGTCGTCAAAATTGATCCGTTTGGC
TGTTCAGTCTTGCACACTTGGTTATTTTCAATTAATTCTTTTAGCACCTG
AGTTAAAATGTTACTTTTAGCCACAGATTTTGTTGATTCGGGCACATTAA
GCTTATCCAATTTGTAATCATGCCTACGAATAATTTAAATAAAGTTTGAG
CCCAGTGCGGATAGCACGTTCGTCAGTACTATATCTGAATATGGAATACA
ATATATTTTGC Run BLAST on NCBI transcript from alignment at scaffold_59:43529..44295+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071130 ID=TCONS_00071130|Name=TCONS_00071130|organism=Clytia hemisphaerica|type=transcript|length=767bp|location=Sequence derived from alignment at scaffold_59:43529..44295+ (Clytia hemisphaerica)
TAATGCGATGCTTATCAGAAAATAACTTAAATGGTATGTACATTATGATT
TATTCAAACAGATTGTGAAAATAGCTGTTTAAAATGATTTTCCATACTTT
CTTGTTAggtcaaaaaaaagtaaaagagctttatttaaagtttttattat
ATCTTAAGTGAACttaaaactttcaatgtttCCATTTAGAACTTGATGGT
CTGGATGATTAGCTCACAGCAAACGAAAAAGTGACTGGTCCACGCTCCTG
CCGAAAGCTAAATCGATAGTATATCTATAATTTCATCTCTTATATttgtt
gatctttttttttttaaagaagttatttttttgtgttgttcttctatatt
ttttttatttaaacccagttgatatttttaaaaagaaaaagtattttgGA
CGTTTTCGTGTCTAAAagatatgttttattttatttctatattaacgtat
tttctatatttacaaagatttttgaagaGAGTAGATATTTTTAACACCTC
GtacatttgaaaaattcaaagaaaatctagcaGTCGTCAAAATTGATCCG
TTTGGCTGTTCAGTCTTGCACACTTGGTTATTTTCAATTAATTCTTTTAG
CACCTGAGTTAAAATGTTACTTTTAGCCACAGATTTTGTTGATTCGGGCA
CATTAAGCTTATCCAATTTGTAATCATGCCTACGAATAATTTAAATAAAG
TTTGAGCCCAGTGCGGATAGCACGTTCGTCAGTACTATATCTGAATATGG
AATACAATATATTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071130-exon-scaffold_59-1491911889:43529..43561 | TCONS_00071130-exon-scaffold_59-1491911889:43529..43561 | Clytia hemisphaerica | exon |
| TCONS_00071130-exon-scaffold_59-1510915933:43529..43561 | TCONS_00071130-exon-scaffold_59-1510915933:43529..43561 | Clytia hemisphaerica | exon |
| TCONS_00071130-exon-scaffold_59-1575043694:43529..43561 | TCONS_00071130-exon-scaffold_59-1575043694:43529..43561 | Clytia hemisphaerica | exon |
| TCONS_00071130-exon-scaffold_59-1491911889:43718..44295 | TCONS_00071130-exon-scaffold_59-1491911889:43718..44295 | Clytia hemisphaerica | exon |
| TCONS_00071130-exon-scaffold_59-1510915933:43718..44295 | TCONS_00071130-exon-scaffold_59-1510915933:43718..44295 | Clytia hemisphaerica | exon |
| TCONS_00071130-exon-scaffold_59-1575043694:43718..44295 | TCONS_00071130-exon-scaffold_59-1575043694:43718..44295 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:43529..44295 + |
Blast
The following BLAST results are available for this feature:
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