TCONS_00071238 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071238
Unique NameTCONS_00071238
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2416

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071238 ID=TCONS_00071238|Name=TCONS_00071238|organism=Clytia hemisphaerica|type=transcript|length=2416bp
GCTTCCATTTTGTGAGTTTTTGCCGAGAATTTTTGAAAGTATgacttgga
aatattgaaattaatCGTTATTACATTCTATTTTACagttaaaaataatt
gaaacttataGAAGAAAGATCGAGCTACTGgtttatgtaatttttttctt
caaatatgtGCGTTTTCTTCGACATTGATGGGCACAATTTCGTCCATGTT
TAGTGATAGTTGAACCTAAACTTAAAAGTTCACAAAGAAATACATTTTAC
AAAGTATTCAAAATTTAGAAGATAGTATTTGTTTTATGGTATGAATTTAT
TCCAAGATATTCTAGTTCAATACTAGCAAGTATGATAtgaataatcaaaa
cattatgCAACAATATTTTGACCCACAACAACAGGCAACTATGAACGGTG
GATTCCCTGGAACTCAAGGATTTCAAGCAAATCAACAGAACATAAGTAGT
TCAATAAATGGACCGACACCAACTTCTAATGCTTACATGTCAAGTGCTGC
CGGCTATCAGCAAAACGGCGCTGCTAAATTCAACAATAACACAACTTCTA
ATGAAAGTGGTGAAAGCTTTGATAGTAACAATACAGCACAGAATCCTCCC
AACAGTCAAGCCCAGATGTTTCCTCCAAACTACATGGATCCTAGAATGGG
TGGGTTTGATCCCAGAAATAGACCAAACCTTGATCCAATGTCTTCTGGAA
TGGATGCATTTGGTCCAAAtacaaattttccaaataaaatgAGAATGAAT
GACAATATGGCTGCTTTTTTCAACAATCCTGCTGCAATGGCTGCACTTCA
AAGGCAAAGGATGGGAATGTATGGTCAAGGAAGAGAAAATgatTTCATGT
CTCCGAATAATCCTTATGGGAACTTCAATCCCCAAGCAGCAAACTTCATG
CAGCAGCAACGATTTGCAGCTTTTCAAAGACAAATGCAGATGGGTGGTCG
AAATATGCAGCAATTTCCACCAACATCGAATGCTGGCAACCAACCAAACC
CCAAAGATAATGGAGAAGGTCCAAATTCATCTACACCAACCCCACAACAA
CAAAAACCAGCTACTCCTCAGCCAAACGACTCTTCACCAGCTCCAAGAGA
AAAGAAGTCAAAGAAAGGAAGGTCCAACACACCTAAGacCAACAAATTAG
CAAATGATAATGCAAATGCATTTCCAGCTAACAACCTCCCAACGGCTGAT
GGCAATAACCCTCAATCGACTCAAGACCAAAATAATGCTGCAATGATTGC
TGCAGAGGCTGTACGTGTTGCTGCCGCTGCATCTTCTCGAAAACCTGGAA
TGGCTCCTCAGCCAATGGGTGGACCCTACGGAATGCCAGGGTATCCAATG
AATCCAGTCCCTGGTATGCCTCCACATATGCAGCAAGCACCTTACATGGG
TCAGAATCAACAACCTCCTGACTTTGGTGCAATGTCACCCAGTAAAGATA
TGTTAATGGCAATGAACCAAGGTCGTGGAACTCCTCGCAACAATGTCCCA
CCGCCTCCCTACTCACCTTCACCATTCAGTAATGATAGCAATCACAGTGC
TTCTGGATCAGTCAAAGGATCTTCGTCGAATCTGGCAAATCTGCCCAAAG
GCACACCTGTCAAAGCTGAAACCAATCCCAGTACTGATGATCAACAAGCT
TCAACGGAAAACAGTTCGACTACTGATAAGaccatcaaaattgaaaatga
cGACCCTTCAAATGGCATCAACCTAAATAGCCAGCAACAACAGCCATCAC
CTTTCATCAACCACAATACAGTATTATCATCTCCACACACACCAGCTTCA
AATGTACCAAACAATGCCTCTCCTGCACCATCTCCTTTTCAAGACGACAA
CAACTACATCGACAATCTCAGCCCTTCGTGGCCTAACACTCCACTCTCTC
CTAATGCTCAAAAGAAGTTGAAAGCCAAGACTGCTCCTAAGCAGTTTGAC
CAGTTGTCGAAAGTTTACGACGTTATTCAGGACGAAGAAAAACGAAACTT
CTTCGACAAATATTTGGCATTCATGAGTGTCAATGGTACACCAGTAACGA
AACTTCCGGTAATCGGCAATAAAGCCCTTGACTTGTACAGCCTTTTTCGA
TCCGTCTGTGAACGTGGTGGTATTCAACAGGTAATGGAAAAACGaatctt
caaagaaattttgacgTGTTTGACTCTACCAGCTGAAGACGCCACCGTAG
CTTACATGCTAAAGGCGCAGTACATGACTTATCTCCATGCTTACGAGCTG
AAGGCTAAAGAATCGTTACTCAAACAATGGGGTCAAAAAAAGACGCTCGA
AAACTCAGTACCTTCCACAGCAAACTCTGCTGTACCTACTATCGCTCTCA
ACGATTCCTTCCAACCGGACGTGAAACCAGTTCTTTCGAGTGGTGCGATG
ACAAACCAGAACGCGA
Run BLAST on NCBI

transcript from alignment at scaffold_60:365308..376287+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071238 ID=TCONS_00071238|Name=TCONS_00071238|organism=Clytia hemisphaerica|type=transcript|length=10980bp|location=Sequence derived from alignment at scaffold_60:365308..376287+ (Clytia hemisphaerica)
GCTTCCATTTTGTGAGTTTTTGCCGAGAATTTTTGAAAGTATgacttgga
aatattgaaattaatCGTTATTACATTCTATTTTACagttaaaaataatt
gaaacttataGAAGAAAGATCGAGCTACTGgtttatgtaatttttttctt
caaatatgtGCGTTTTCTTCGACATTGATGGGCACAATTTCGTCCATGTT
TAGTGATAGTTGAACCTAAACTTAAAAGTTCACAAAGAAATACATTTTAC
AAAGTATTCAAAATTTAGAAGATAGTATTTGTTTTATGGTATGAATTTAT
TCCAAGATATTCTAGTTCAATACTAGCAAGTATGATAtgaataatcaaaa
cattatgCAACAATATTTTGACCCACAACAACAGGCAACTATGAACGGTG
GATTCCCTGGAACTCAAGGATTTCAAGCAAATCAACAGAACATAAGTAGT
TCAATAAATGGACCGACACCAACTTCTAATGCTTACATGTCAAGTGCTGC
CGGCTATCAGCAAAACGGCGCTGCTAAATTCAACAATAACACAACTTCTA
ATGAAAGTGGTGAAAGCTTTGATAGTAACAATACAGCACAGAATCCTCCC
AACAGTCAAGCCCAGATGTTTCCTCCAAACTACATGGATCCTAGAATGGG
TGGGTTTGATCCCAGAAATAGACCAAACCTTGATCCAATGTCTTCTGGAA
TGGATGCATTTGGTCCAAAtacaaattttccaaataaaatgAGAATGAAT
GACAATATGGCTGCTTTTTTCAACAATCCTGCTGCAATGGCTGCACTTCA
AAGGCAAAGGATGGGAATGTATGGTCAAGGAAGAGAAAATGTAAGAATTT
AACAGACCAAATTTTTAGTGCTTTAACAAATAGCAATGATCTGTTGAAAA
ccaAACCATTTTGTAAGGGGTGAAGTCATTTGTCATATATCTTTCAGGCT
AGCAGTTAGtaacactaggaaatctagctttcagaaaaaacaacatcagt
catctacaggatgtatttacACAAAAAGGATAAGAGTTttctgaatcaag
ttcgcaagacaattaattaaaactttgaaacaaaataaaacgtgcagcag
ccaaaatcaaccaaccaaaatttgtcattcaattcctgagacagagcttc
gatttttaaggccttgtttataccctaaagtaaaaataattccgcacatg
taaatgggtcattgtttgaggtccggcaaaatttccgggaaacagcctat
ccggtggtgcaCGGATTTAGGTGGGTTctgcctcccccgtagatcttttt
cttgggaagttgatcttcaaattaattttcaaggttggcttggctcaaat
tttttcatctatggctcaaatttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtgcggcgcatttttttgcttgagagtcaag
taaacgatatagcgctttcgtagcattaatctttgatacgcattttggcg
ggacgctagtgtgactaactggctAGCTCTAACCAGCATCTAATATCATG
AAAatcagaatatgattcttcaatggaaatcaaaactatatagtgcactt
acaaacatcaatatgttagatctaacaaaaataataacagCAATGTCAtc
aatcagttacatcaatatgccttcttacctgtctttaaaaatataaataa
aagtaatcacgaaaaaggacgcgaaaaaaaaagacataagtgtgagaaca
gagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCAATCATTTATTCAAGCAAAGAGT
ACGTGAAGCGATtttagctttacgatagtgccgcggatcatcagtggata
gtattcaattatcattatccattttaatttttgtatgaagagttaggtct
atactgtcttTTGTAGGATGCAACCTTAGGTTGaatgcaatagacctttt
tttaaagaagccatgttgaataattatgtactccagcataaaaacaatga
tacagccatgcatagttactgtatcatgcatattttaaaattatgcatgg
ctgtatcataattattcaacatggctgcctctttaaaaaaaggttaaaaa
ctcCACTGACTCtagcagtgctgcaaataacggccggtgaccggtaaata
ccggtcattttgtagtttctaccggtcattctgaagctcagtttttcatt
ttgtccggttaaaattttAGATTAGAGGCTTCTTAATAGCGCTTCTAATT
AACAGAGGAgcagtttttaaatcaaaataggtgtttagccaatctaaagG
TTATTACAGACTACAAATTTTCTAAGATGGTTCCACCAGACCCCCGCTCG
TTACACTCGAAATATTGCTggccaactgaaatttccctatttgcagcact
gtctagcatcaaaataataataagaaaatatttagtACTGTATAGACAAA
TTTACAGTAACTTCAATTCCATTATAGCAACTAGATCTGGTCTGCCAAGT
AGTTAGTTTGAGTTTTTAAAGCAGCTTACTCAGAAGGTTTCATTTATAAA
CATTAAAAGACCACATGGATCAAATTAACGTACCACGATtcgtttttgaa
aatgtaagaagcaaaagttcaaaaatactGCAAAATTACAATGCAACATT
TTGGGGATTTGGCCCTTTTGTATGAAGTAGTTTCCCTTTTTCTTTCAGGT
GGTCTTTGCCAAGCTTCCCTCAGAATATGGGAATTCCCCAGGGTTTCCTC
TTTTTTGATACATGTAGTTTCTTACTAAGACAGGGGTGCTTTGTATGTTT
AGCTTTCCCTATAACTGGAGGCAAAAAAGTCATCTTCTCTGAAAAATGAT
TAGTTGAATCTTGAAGCAAGTAGTTTGAATCTTGAAGCAAATACAAATGT
TACTTTGCGATGCTATTTCAAATCATAAATTCAATACTCCTTTAGGTGAA
TGTTTATTTTCGTGATAAGTGGCAGATAATGTCCGGCCAGAATGATTGGA
GAAATTAAAACCAGCCTTTTTCAGCTCACTTTATTCCCAAAACGTGTGAC
TTTCAAATCGTTAATTCAATTCCTGGACCAGATAGTTGCCATGGCAGAAT
TAGACAAGGTTTGTGGCCAATATACAAAGTTACTGTACTGAAGTTGGTCT
ATGTAATGTCGACATCCATCGTCCAAGTCCAACATCCTTCTATAGATATA
GGAATAATGGGAAGGTTGGATCTACTgattaaaagaacattttttccttT
CTAACagctaaacaaagaaaatgcaGTCTCAATCAGCGATTCCAGCCTTT
GTATTTTGCTTTGtagacattagaccaacttacagtaatAATTATGCTTT
TGTGTGTTATTGTTGtgatgctggagttttttaTCATTCAACATGATACC
GGGGTCCTACAAATTGGTCTATTCTTCCACAGTAACTAACAGCAATTTTA
AGACGAAAAAAGTGCCTGTATAGTGAGATTCAAAGATCATACAGATGCAC
ATAGACCCACCTGCTGTGAATGAAATATACACAACATAAGTAATAGGCTG
TTTATTTTGGTTTTACTAGCGAATAATTTCAgattttggaagaaattttc
atagTTTAGAGTAAAAACAGGGTGTTGACCAGTGGCCAGACCTTTAATAG
GCCTAAGAAGGCCTTCAACCTTACATTGACCTTTAGCCCTAACCAAAAAA
ATGGGTTGGATCTTTGTTTTAAGTTATCACTTTCAGAGGGACAGTCAATG
ATAAATTTTCCTTAAATTAGTTTAGTTTCAAACTAACGAAAGGCCTTACT
TAGTCTTATTGCATCAAAAAAACTAGACAGAATCTTGTGATGATCAATGA
TGGATTTCAAATTGAATTCTCAAATCTTGTTAAATTAAGAATTCCCTTAA
AATCTTGATAAAAATATCCGAATAGCATAAGTTTGTCTTCAGGTTGTTAC
TGTTTGGAACTTTGTTTTATCTCCAAAATTGTATCACATTGTCAACACTG
AATCATTGCACTTTTGAATCTAATTGAGTATTGAAAAACCTATTACACTT
TTACActgaaaacctaaaaaaggtaaaaacagGAAATAATTGATTTTGGC
AGAGCCCTGTTTgtggccgggtagctcagttTGCAGACAATTGGCCTTAC
AATTCAACTAAGCAAAcaagtagcttagattgggaaATCTGATTTAGGCG
CTAAGTTATTGGGAGTAGATGTGGCACTCAATCTTAGCATTCAATTTCCC
AGGTGGTGATAGGAAATTGCCTGGGAGGGGAAGGGGTGGGAAACTTGGCC
TTTGGAAATTTTACCTTCCAAATATTGCCCCCTCCCTGCACTAATTTTGA
CCAACATTGAGATTATgcatacaaaatataaaaaaaatacttttttgaga
aaCTTATTCTTTGATCGATCCTGGACATAAATATGTTGACAAAAGTGTTA
TCATCCCTGTTTCATACTGAGTACAAGTTTGATCTCCTATATTTTATTAC
AATTTATTTTTATGCTCAAATGTCAGTCTTGTTATGCCTATAACAATTGT
TTAAGTTTAAGGATTACTCTGAAACTGTGAAATAGAATATATAGGTTAAG
gcattaaaatattatttatatCAAAGTTAAATTCAAAAATGATGCTGCAT
AATGTATAAAGTTTTGCTAGGCCATCGGAAGACTTGGatgacaatttgaa
atttcttaagaTGGATTTTTATGTtagaattctattgttttcttgctaaa
ggtaaaaaaacttgtaacttgaaTCTTGACTTTGGAAAAGAGTTTGGCTA
AAAGATTTTGGTTTTGCTCAGAACCATGGGAGGAATATACAGGCAAAAGA
GCTCACCATCTGATGTCCCTCTAaggcttcttctttttcaagctttttta
tttctgactATTGAGTTTCAAAATGTTTCTTTAATACTCCaacatacttt
aggcgtacaaaaagaaaattttgcaaattttagcctttttcgcaaaagtt
tatgttCATCTCCCCCCCCCCTCTTCAGAAAGGGGGGGACGAATTATGAT
GTAATCTTACCAGCCTCCCCAAATTCGTCTTTGCAAAGCATTTTTTTTCA
GGGGAAATTGATTAAAAGGACATTCACATATTGGTAGGGAGGGCAGGCCA
TATTTAGAAAGGCAGGGAAGCGTCCGTGGCCAAGAAGGGCACTTATTCTT
GTTTTTCTGTAAAAAGGCTGTTTTACCAAAATTCTAGtaatttcaggagg
ggcagcaTCCGATGACCAGATgctaaaagggcatgaaaaatggccttgAG
GGTGTAGAGACCCCTCTACACAccatggtaaattttatttcagATGGTCA
GATACAGTTCATAACTTCCAAATAGACTACCTCACACTTGAATTATTCAA
GTCAGAACAATTCCTTTCAGACAATTCGTTGGGAAATTTGAAATTGATAT
TTTGAGGTAGAGTTTTAGATgcaacttttcaatttttctttgtcGAAAGG
CTTATTTTGAGTGCTGGTACTGTCAGGTACTGAAATCTCATTCATTATGG
CATGCTGAAAACTCAGCCTGCTACCCCCAAGCTCTATGTTGATGGCAGAA
TGAGATGTCTAGTGCTTACACCAACAACTTTTCCTCCAGTGTGGTTGGTT
AATATTCAAGTCTCTCTGGTTAAAAGGTTATTGATGGCCTTATAACAGTC
CTTTTAGGAGATTTTACTAACATTTTACTCCACCGTTTACTATTCTATTA
TTTACCTCAGAGTTAAATTATGCTGCAACCATATAAATGGACAGAGCTCG
TCGTTGTAATAACTAGAAGAGCTGTACTTTTCCAAATGAATAAAAaccaa
aagaagaaagaaaaaaagattctatCCTTGTTGTTCACATTCTAAATCCT
GTtgatttgaataaaagaaattaattaATTACCCTTTCATTACGTTTTTA
ATTGCTTCATTCGCAATTTTTGATgacttttgtcatttttcaaaagtgaa
ttttgacttcaaaagcttacTAAAGAACTAAAGAACTACTGgactaaatt
taaaaagttataacCCAAAGTATAAGTTTGTTTTTCCTCTTTAcaatgga
aaaataattttgtaaaaattcaaattattttgagcacaGTTACCCTCGAA
ATACCTTTTTCTTGGTCACCTGGTATTATTCTGCATTAGAATTTCACCAA
TAAACAATTTCCTTCTTAGGTTTGACTGTCAATCCCATCTTCCCATTTCC
ATCCCTTCATTCTTTGTTATCCCCCCTCCCTAAGATAGGCAAGAAAAATC
ACAGGAAACGATCAGTCTACAGAATTAACCCATTGAGTATTGTTGTAGCA
CTCTATAGCACATACTTTTTTGCttagaatttcatgctctatccgaagtt
aaaaattttttttaatttgactttTGATTGGCCTAATTCGAATACCCtct
ctcaaaaaaattaaagacctaattaatttttttcttcaggatTTCATGTC
TCCGAATAATCCTTATGGGAACTTCAATCCCCAAGCAGCAAACTTCATGC
AGCAGCAACGATTTGCAGCTTTTCAAAGACAAATGCAGATGGGTGGTCGA
AATATGCAGCAATTTCCACCAACATCGAATGCTGGCAACCAACCAAACCC
CAAAGATAATGGAGAAGGTCCAAATTCATCTACACCAACCCCACAACAAC
AAAAACCAGCTACTCCTCAGCCAAACGACTCTTCACCAGCTCCAAGAGAA
AAGAAGTCAAAGAAAGGAAGGTCCAACACACCTAAGGTAACAAGACTTCT
GCCAAATATGTGTTAGTTGTGTAATATTAGAATAATTTGGATAAAAATGa
agctaaataaataaatggaaTAAAACTGGCCTAGATTTGGGTtgagaatt
ttctttttctgaaaacagaTGTAATAgtgtttgaattttgtttttagacC
AACAAATTAGCAAATGATAATGCAAATGCATTTCCAGCTAACAACCTCCC
AACGGCTGATGGCAATAACCCTCAATCGACTCAAGACCAAAGTAAATACT
TCATACTGTTcataattattttgttttaattttattgGGAAGAAAATGAT
TCATTTTACAATTAAATGCAATCCAACCAAATTACTTGTACAATTTTGCT
CATGCCAAAAATCGCTCCCTAGCCAATGGGGAACCCTAcggaatgaaaaa
aaacaacaaattgaatCAACAATAAAATCAACTACTGCCATGAATTTGAC
TGGTTAAAATcccctttttcttttaaaagttcAATTCACTCTTTGTTTTA
TGTCACGGTAGGATTGAGCTGTTCAACTCTTTTCTTACAACCATAGATAA
TGCTGCAATGATTGCTGCAGAGGCTGTACGTGTTGCTGCCGCTGCATCTT
CTCGAAAACCTGGAATGGCTCCTCAGCCAATGGGTGGACCCTACGGAATG
CCAGGGTATCCAATGAATCCAGTCCCTGGTATGCCTCCACATATGCAGCA
AGCACCTTACATGGGTCAGAATCAACAACCTCCTGACTTTGGTGCAATGT
CACCCAGTAAAGATATGTTAATGGCAATGAACCAAGGTCGTGGAACTCCT
CGCAACAATGTCCCACCGCCTCCCTACTCACCTTCACCATTCAGTAATGA
TAGCAATCACAGTGCTTCTGGATCAGTCAAAGGATCTTCGTCGAATCTGG
CAAATCTGCCCAAAGGCACACCTGTCAAAGCTGAAACCAATCCCAGTACT
GATGGTAAACTACATTTCTTTATCTTGTTAATGACTGCGACTTGTTAAAA
ATTGCTAATTTCCACTCTTCTTTTTTATGAAAGAGTAGTTTGAGAGCTGT
TTAGAGAACTGTGTTTTTATGTGAAACATCAAATTTGGAGACAGTGTTTG
TCTAGACGGATATCAAACATTTCTCATTAGCTGTTTTTAGCTTTGTTGAA
TATTTAGTTTGTGTATTGCTATTATTAAAGATCAGAAGCATGTGAATTCT
TGAATCTCATTAAACGGTTTTATATATCCTGCTCAGATTTTTTTACTAGT
ATATTACCATGACAAcgttataaaaaaattgattgttttttgaaaataac
aataagggtttttttacatgttctatttttagaagtaaaatttttcaaag
aggaaATGTGTCCTATTATGGATTATGACGCTTCAATGTTTTTATTGAGC
TTCTGActgttttaaaaataactttttcccacGGAAAATCCTCTTTTAGT
TGAGTCGCGTGATTAATTAATAATAGACATAGTATTTACACCTACATGTT
TTTGCATTTGATAGTAAATCCAAATCAAATGAATAGGGATGtctaaaaaa
aacttgaattgTGATTTGAGATAACCACAATCTGTTTCTTTTCCCTCCCT
CTTTGCTTCTTCTTCGTTTTACTTTCCCTTTTTGGACAAACAACTAGTCC
ACCTTTAGTGTTTCTTCTATttcaaatgtttattttttattccatTCAGA
TCAACAAGCTTCAACGGAAAACAGTTCGACTACTGATAAGaccatcaaaa
ttgaaaatggtaAGCAGTATTTCATTTTGAtgcttttctaaaaacaaatc
AATTAGCTGCCTGTATTTTACCGACTGGACGAATATCGAAGTAATtgtat
atttaattttagacGACCCTTCAAATGGCATCAACCTAAATAGCCAGCAA
CAACAGCCATCACCTTTCATCAACCACAATACAGTATTATCATCTCCACA
CACACCAGCTTCAAATGTACCAAACAATGCCTCTCCTGCACCATCTCCTT
TTCAAGACGACAACAACTACATCGACAATCTCAGCCCTTCGTGGCCTAAC
ACTCCACTCTCTCCTGTAAGTTGTATATCTCTTCCTACTCCTATTGAATT
ATTGTAAAATGTATGATAAATGTACATGGTGTCAAGCCCCGTAGAAACCT
GAAGGCCACCTAGGTGGGGTTAGGTGCTTGAATTTCGCAATTCCTTGGGG
TTATCTTGTTCATTTGGGGTACCAAGCTGTACCTAGCTGTACTTtccaaa
ttaaaaatatttcaaattgttgACTTTTTACCCCAGCATCTAGTTCCCCA
ATTTTAATTGTCTTTTATTTCGTTTCCCATTACGTCATCTTTTGGTATCC
TTTAaatgtgattgttttgatttacagttACCACCATTATAGCATGAATT
GTAGTGAAATTGATCGGCTGAATGGGGTACCTAAATCATGCCATTTCTCA
AGGAGACCTAAAACGTTGGGCACCTTACTTCAATAAAGAGACACCTAAAA
AGTTGGTTGAAACCATGCGCACTCGTACTTAGTCCTTCATACATCACGAG
AATCAAAACCCTGTCAAAACTGAACTTACAGACCTGTATTATTGCTGTGT
TCTTTTTTCATAGAATGCTCAAAAGAAGTTGAAAGCCAAGACTGCTCCTA
AGCAGTTTGACCAGGTATTGTGTCCTCTAATATCTCTTATATATGATTAA
ATTTGCCCATCAAAATAAGTCTATCAAACCCTTATCCCAATTTCCCGTTT
TACATTCTGTATAGTTTATGGCGATGATATTCTCTAGAAAAGCCTATTGT
TTCGTATTTGTCATTGAAGTTTTTTAAGCTTGAATTTCTCNGATGATATT
CTCTAGAAAAGCCTATTGTATGCCTAATTTAAAAATAAACGTTTTCGTAT
TTGTCATTGAATTTTTCATGTCTATTACTTTTGCAGTTGTCGAAAGTTTA
CGACGTTATTCAGGACGAAGAAAAACGAAACTTCTTCGACAAATATTTGG
CATTCATGAGTGTCAATGGTACGTTTGTTTTATAGTAGAATTGAAAACGT
TGGTAACGATAGAATATCAAACtatcttttgttaaaaaaatttgttatta
GTTGTATTGCTTGATTCACTTCATTCGGCTACGTTTTCTCGAAGTAAATT
TCGAATGGTACGCACTGATTTTAGATGAAGGTTCATTTTTTGTTAGTTGG
ATAATGCAGTAAGTATATATTGTCGTCTTTGCTTTTCAACAGGTACACCA
GTAACGAAACTTCCGGTAATCGGCAATAAAGCCCTTGACTTGTACAGCCT
TTTTCGATCCGTCTGTGAACGTGGTGGTATTCAACAGGTAAATATGAAAG
TTCTGTCTTTTCTGTATTTTAAGCGCTTCATCTTTCAcattcgatttaaa
aaaaatgcacGAGGTAATTTGATCCTCTGGGCTATCAAAAGCCAGTGGAT
AAATTTTGCAAAGAGTTGAAAAAACTTGTTGGGGTACTTTGTTgaggaaa
tctttttttattccCGTTTGCGATTATTTTCGGAAGGATTTCATCTTATT
TTTGATGGTTTGccgtattttcaattttctttttgcttacTCAGGTAATG
GAAAAACGaatcttcaaagaaattttgacgTGTTTGACTCTACCAGCTGA
AGACGCCACCGTAGCTTACATGCTAAAGGCGCAGTACATGACTTATCTCC
ATGCTTACGAGCTGAAGGCTAAAGAATCGTTACTCAAACAATGGGGTCAA
AAAAAGACGCTCGAAAACTCAGTACCTTCCACAGCAAACTCTGCTGTACC
TACTATCGCTCTCAACGATTCCTTCCAACCGGACGTGAAACCAGTTCTTT
CGAGTGGTGCGATGACAAACCAGAACGCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044281XLOC_044281Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071238-exon-scaffold_60-1491911889:365308..366147TCONS_00071238-exon-scaffold_60-1491911889:365308..366147Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:365308..366147TCONS_00071238-exon-scaffold_60-1510915933:365308..366147Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:365308..366147TCONS_00071238-exon-scaffold_60-1575043694:365308..366147Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:372097..372393TCONS_00071238-exon-scaffold_60-1491911889:372097..372393Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:372097..372393TCONS_00071238-exon-scaffold_60-1510915933:372097..372393Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:372097..372393TCONS_00071238-exon-scaffold_60-1575043694:372097..372393Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:372555..372648TCONS_00071238-exon-scaffold_60-1491911889:372555..372648Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:372555..372648TCONS_00071238-exon-scaffold_60-1510915933:372555..372648Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:372555..372648TCONS_00071238-exon-scaffold_60-1575043694:372555..372648Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:372954..373361TCONS_00071238-exon-scaffold_60-1491911889:372954..373361Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:372954..373361TCONS_00071238-exon-scaffold_60-1510915933:372954..373361Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:372954..373361TCONS_00071238-exon-scaffold_60-1575043694:372954..373361Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:374107..374166TCONS_00071238-exon-scaffold_60-1491911889:374107..374166Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:374107..374166TCONS_00071238-exon-scaffold_60-1510915933:374107..374166Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:374107..374166TCONS_00071238-exon-scaffold_60-1575043694:374107..374166Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:374270..374472TCONS_00071238-exon-scaffold_60-1491911889:374270..374472Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:374270..374472TCONS_00071238-exon-scaffold_60-1510915933:374270..374472Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:374270..374472TCONS_00071238-exon-scaffold_60-1575043694:374270..374472Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:375021..375071TCONS_00071238-exon-scaffold_60-1491911889:375021..375071Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:375021..375071TCONS_00071238-exon-scaffold_60-1510915933:375021..375071Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:375021..375071TCONS_00071238-exon-scaffold_60-1575043694:375021..375071Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:375344..375425TCONS_00071238-exon-scaffold_60-1491911889:375344..375425Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:375344..375425TCONS_00071238-exon-scaffold_60-1510915933:375344..375425Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:375344..375425TCONS_00071238-exon-scaffold_60-1575043694:375344..375425Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:375650..375744TCONS_00071238-exon-scaffold_60-1491911889:375650..375744Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:375650..375744TCONS_00071238-exon-scaffold_60-1510915933:375650..375744Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:375650..375744TCONS_00071238-exon-scaffold_60-1575043694:375650..375744Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1491911889:376002..376287TCONS_00071238-exon-scaffold_60-1491911889:376002..376287Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1510915933:376002..376287TCONS_00071238-exon-scaffold_60-1510915933:376002..376287Clytia hemisphaericaexon
TCONS_00071238-exon-scaffold_60-1575043694:376002..376287TCONS_00071238-exon-scaffold_60-1575043694:376002..376287Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:365308..376287 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	8.92345	5.85493	3.91415	4.55962	1.19652	3.7241	1.73678	0.414313	1.52825	1.74626	0	1.78902e-06	0	0	0	0	3.99367e-10	0	0	0	3.52557	3.18835	0	0	0	0
Blast
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BLAST of TCONS_00071238 vs. Swiss-Prot (Human)
Match: ARI3B (AT-rich interactive domain-containing protein 3B OS=Homo sapiens GN=ARID3B PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.918e-21
Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = 1 
Query: 1954 LSKVYDVIQDEEKRNFFDKYLAFMSVNGTPVTKLPVIGNKALDLYSLFRSVCERGGIQQVMEKRIFKEILTCLTLPAEDATVAYMLKAQYMTYLHAYELKAK 2259
             +K+Y++  D E++ F D    FM   GTP+ ++P++  + LDLY L++ V E+GG+ +++ K+I++EI   L LP    + A+ L+ QYM YL+AYE + K
Sbjct:  206 FAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKK 307
The following BLAST results are available for this feature:
BLAST of TCONS_00071238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARI3B1.918e-2138.24AT-rich interactive domain-containing protein 3B O... [more]
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