|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071525 ID=TCONS_00071525|Name=TCONS_00071525|organism=Clytia hemisphaerica|type=transcript|length=931bp
AGGGGATGAGTGTTGGGAAGTTTGATCAACCTTTTCTTGTAGTTGTCTCA
TGCTTTCATGGACTTGagacattattccaagaagaggATATGGTTCTATT
CTTTTTGGTGTATCTATGAATATTCTAGATGAATATCCATATGTGTGTTT
TAAAGGAGTCATCCATAGTTTTGGGGAGTACGAAGATTTTGTTAGGTTAA
TCATTTTATAATGACCATTTGGGCTAACGGCAATCGGACCTTGGTTTGTT
TGCAGCACTGTTTGTTTGGGCAAGTCATCGCAATTTATTTGTGGAGAATG
AAAATGAGCTCTACGTGAAGGTATTTGAATATATTGCGTGACGTCAGAAT
CCGGAGTTTGTAAAGGGAAATATTGGAAACAAGAGTTGTTCAGCTTGGTA
TTATTAGACCTCCTATCCAGTTTTACACAAGTATAATGGACGGGACGGCA
TTCACTGACTTCATATGCATCACCAGCTGGGTGAGCAACTATGTCATTTC
TGCCAAATACCAATTCTGCGACCAAGTCAGGAAAATGGTTGGAAAGCCAT
TGGTGAATAGACCTAATCTCCTTTTGAATAAAACATGTTCGCTTTGCCTC
GCGTAAGGTTTGTTCTTTtatgtttatcaaattttcaattaGGTGCGCCT
GTACCAAGGGAAGTCCTTGTTCTTTAGAAAACTTTTTGGCaagaaatact
atctttttGAAGGAGGCTTGTCTATAATCAAATCGAGTTCCGTTGCCCTC
GATAATGATACCATTATCAAGTGTAAACCATTTACCTTTAGTAGTGGTCT
CATGGGAACTCAAAGGATGATTGAACGAGATAGTGAGGGAATATGGATAT
AATTACCTATTTTCTGTATAGTGACAGGCTCAGATATAGGTTTAATGTCG
ACGTAATCATGGTTTTTCACTTGGTTGGGCT Run BLAST on NCBI transcript from alignment at scaffold_60:730950..731880 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071525 ID=TCONS_00071525|Name=TCONS_00071525|organism=Clytia hemisphaerica|type=transcript|length=931bp|location=Sequence derived from alignment at scaffold_60:730950..731880 (Clytia hemisphaerica)
AGCCCAACCAAGTGAAAAACCATGATTACGTCGACATTAAACCTATATCT
GAGCCTGTCACTATACAGAAAATAGGTAATTATATCCATATTCCCTCACT
ATCTCGTTCAATCATCCTTTGAGTTCCCATGAGACCACTACTAAAGGTAA
ATGGTTTACACTTGATAATGGTATCATTATCGAGGGCAACGGAACTCGAT
TTGATTATAGACAAGCCTCCTTCaaaaagatagtatttcttGCCAAAAAG
TTTTCTAAAGAACAAGGACTTCCCTTGGTACAGGCGCACCtaattgaaaa
tttgataaacataAAAGAACAAACCTTACGCGAGGCAAAGCGAACATGTT
TTATTCAAAAGGAGATTAGGTCTATTCACCAATGGCTTTCCAACCATTTT
CCTGACTTGGTCGCAGAATTGGTATTTGGCAGAAATGACATAGTTGCTCA
CCCAGCTGGTGATGCATATGAAGTCAGTGAATGCCGTCCCGTCCATTATA
CTTGTGTAAAACTGGATAGGAGGTCTAATAATACCAAGCTGAACAACTCT
TGTTTCCAATATTTCCCTTTACAAACTCCGGATTCTGACGTCACGCAATA
TATTCAAATACCTTCACGTAGAGCTCATTTTCATTCTCCACAAATAAATT
GCGATGACTTGCCCAAACAAACAGTGCTGCAAACAAACCAAGGTCCGATT
GCCGTTAGCCCAAATGGTCATTATAAAATGATTAACCTAACAAAATCTTC
GTACTCCCCAAAACTATGGATGACTCCTTTAAAACACACATATGGATATT
CATCTAGAATATTCATAGATACACCAAAAAGAATAGAACCATATcctctt
cttggaataatgtctCAAGTCCATGAAAGCATGAGACAACTACAAGAAAA
GGTTGATCAAACTTCCCAACACTCATCCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071525-exon-scaffold_60-1491911889:730950..731880 | TCONS_00071525-exon-scaffold_60-1491911889:730950..731880 | Clytia hemisphaerica | exon |
| TCONS_00071525-exon-scaffold_60-1510915933:730950..731880 | TCONS_00071525-exon-scaffold_60-1510915933:730950..731880 | Clytia hemisphaerica | exon |
| TCONS_00071525-exon-scaffold_60-1575043694:730950..731880 | TCONS_00071525-exon-scaffold_60-1575043694:730950..731880 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:730950..731880 . |
Blast
The following BLAST results are available for this feature:
|
