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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071533 ID=TCONS_00071533|Name=TCONS_00071533|organism=Clytia hemisphaerica|type=transcript|length=1010bp
GTTTTACATTATTAAAAATTCTAACGgaaaatgaaatgaataaaaaactc
aGACAAATTTAAAATCTGCCAAAAATGACATAAAGAGTGCTAAATTGAAT
GCAGTACAATCTGAAGCTGACTCGGAGTTgactatttcaaaattcattcg
AAAACTTGAAGTTGTGACAAACAAAATCGTCAAGAAAGCTGCGATAAAAT
ATCAAATGATTAGAAATAAAGTTCAAGTATTATTGATAGCCAGCCACCAC
CTTCCTGTATGAAGTATTAGAACGAAAtgaaaagtcaagaaaaatatttc
ccatCTGTCCAGTGCACTGAAAAATATTATTCCTATATCTGAAGATCAAA
ATGTGAATCAAAAGTAAATTCAATACGAAACAAAGAAGTATCAACTGCGC
AAGTCACGTTTTTTCCTGTAAAACAATAATTAATCTTCGAAGCTTTTACA
GTATGATGATAAGCTGGCACTGCGAGTCACACTAGGTTAGGTTTTCAAGG
AAAATACGAGCTCTAACCTTCTCTTAAAAGCATTGTGTAACCTATTGCTT
GAATGTGAAACAAGCCAGCTAGAATATATGTAACCAGAAAAAGGTAACCC
TAGTTAGCATGtgagagaaaaacaaaaatatttttcctgcGTCAAATTCT
CATGGGCGCCCCCTCACTGAAAgttcatcaaaagttttgataaagCACAA
GCGTGCTTATTATCATCACAATCCACCTActaaaaaccaataaaattctT
CATAAAGATCAACAAACGATGGGGTCAGAAAGGTTTAATTATATCACATG
AAAAATCAATTGTCACTTGATGAATTTTTGACGTGTCATCCTAGTAGTGC
GTCATATAAGCGCCTGATATTTAGAGAGCTATCGAGAAAACATATTCATT
CCTTACGTAACTTAATTGGCAGATTGTTCCGTGGAAAGGGTGCGCCCTTC
ATAGATATCGAGGTTCCAAAAGTTGAAACGCAGCAGTTTCCAATAAAACC
CACCACAATA Run BLAST on NCBI transcript from alignment at scaffold_60:912564..913573 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071533 ID=TCONS_00071533|Name=TCONS_00071533|organism=Clytia hemisphaerica|type=transcript|length=1010bp|location=Sequence derived from alignment at scaffold_60:912564..913573 (Clytia hemisphaerica)
TATTGTGGTGGGTTTTATTGGAAACTGCTGCGTTTCAACTTTTGGAACCT
CGATATCTATGAAGGGCGCACCCTTTCCACGGAACAATCTGCCAATTAAG
TTACGTAAGGAATGAATATGTTTTCTCGATAGCTCTCTAAATATCAGGCG
CTTATATGACGCACTACTAGGATGACACGTCAAAAATTCATCAAGTGACA
ATTGATTTTTCATGTGATATAATTAAACCTTTCTGACCCCATCGTTTGTT
GATCTTTATGAagaattttattggtttttagTAGGTGGATTGTGATGATA
ATAAGCACGCTTGTGctttatcaaaacttttgatgaacTTTCAGTGAGGG
GGCGCCCATGAGAATTTGACgcaggaaaaatatttttgtttttctctcaC
ATGCTAACTAGGGTTACCTTTTTCTGGTTACATATATTCTAGCTGGCTTG
TTTCACATTCAAGCAATAGGTTACACAATGCTTTTAAGAGAAGGTTAGAG
CTCGTATTTTCCTTGAAAACCTAACCTAGTGTGACTCGCAGTGCCAGCTT
ATCATCATACTGTAAAAGCTTCGAAGATTAATTATTGTTTTACAGGAAAA
AACGTGACTTGCGCAGTTGATACTTCTTTGTTTCGTATTGAATTTACTTT
TGATTCACATTTTGATCTTCAGATATAGGAATAATATTTTTCAGTGCACT
GGACAGatgggaaatatttttcttgacttttcaTTTCGTTCTAATACTTC
ATACAGGAAGGTGGTGGCTGGCTATCAATAATACTTGAACTTTATTTCTA
ATCATTTGATATTTTATCGCAGCTTTCTTGACGATTTTGTTTGTCACAAC
TTCAAGTTTTcgaatgaattttgaaatagtcAACTCCGAGTCAGCTTCAG
ATTGTACTGCATTCAATTTAGCACTCTTTATGTCATTTTTGGCAGATTTT
AAATTTGTCtgagttttttattcatttcattttcCGTTAGAATTTTTAAT
AATGTAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071533-exon-scaffold_60-1491911889:912564..913573 | TCONS_00071533-exon-scaffold_60-1491911889:912564..913573 | Clytia hemisphaerica | exon |
| TCONS_00071533-exon-scaffold_60-1510915933:912564..913573 | TCONS_00071533-exon-scaffold_60-1510915933:912564..913573 | Clytia hemisphaerica | exon |
| TCONS_00071533-exon-scaffold_60-1575043694:912564..913573 | TCONS_00071533-exon-scaffold_60-1575043694:912564..913573 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:912564..913573 . |
Blast
The following BLAST results are available for this feature:
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