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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071537 ID=TCONS_00071537|Name=TCONS_00071537|organism=Clytia hemisphaerica|type=transcript|length=1461bp
TAATATTTGCTAATCAAAAGCACCTTTTCTTTTGTCCGAACGACCCCTGC
TGATCCGTTTGTAAACAAAGGCTAGTcagcaaatttttttgattagGGGA
ACACTATTTGTGACGTCTACTCGCGAAAAACACATTTTTACCCACCGCAA
GACGATAATGAATAggtttatttgttttgataGGCGTTATTTATTTACGT
CGCAAAATGAAACATGACCCTTGCAAGGAAATGAATGCAGGCATCGTATA
GGCTTTCGCTTTTCTTACTTCATTTCGATTCATGGCACAATCGTGTGATT
CTAATTCATGATTTATCAGGTCATCCTCACAGGTGGAGAGCTAAGGTTCA
TACCTCATCATGACATTTTTGGTAAGAGACAACACTCCGTCGTATTGTTT
TTTTTCGGAGATGATACAGAACAAAGAGTTTGCTTGATAATGATTTGCAG
TCTTGTTTTTTAAATGCTTTTTTCGTTACATATTTTATCGACATATTCAA
TTACACGTGATATTCTTTTAAGGTATAAGTTGCATAGCTGTACTGTTTGC
TTACTTGTTGTTTGTCGTGGTTATTTAGCTTAACTTATAATTCAAGACTC
TTTCAACGCTCAGGTAGTGGTAGGGCTagaaaggaatcttcaacctttct
caagcaagaaaaagtgaagccttaagtttgCCCCGCATTTAGAATGTTTG
CTTGGAAAACACAGGTCATGTGTTCTGGATAGGAAATTGGTGGCTTCATT
TGTCATCCAGGAGTATCGGATCTAGCCCtttcggggctttgaaatcaatg
gctTTAATCCTTGGGAATCTATTATTCTCAGTGTTGCTCAATCTTTAAAT
TCACATAATACGAAATTATGCTTCCATTCTTGGAATGCAAATTGACCCAG
GAAGACCAGTTGGTAAATCAGAACAGATGCATAGCAAGTGTTAAACAGCC
ATTCACATCATGGACTTCAAGTATCATTTGTAGGCTGCTGACTTCCagta
acggattcgtgctccttatggATATATAATATGCTATGTGTAGTTTTTCG
AGGTCTATGATTCAGACTATATCATTTGAGGGTCTGAGGTTAGACCTTTA
CTTTTTACGCCTTTATCAAGTTTTATCGTACGACTGTAAATAATTTATTA
CTGTTTTATTGCCGCTATCAAAAACTTGTTCTTGTGTGTTATATGATACG
TTTGCGCTGAGATAGATCTTTATCCAGATTGTAGTTTGTCAGGTTGTCAG
TAAAAATGGTGCTTGATGGACAAATGTTATAATTGGatatttgaataaaa
gaagtttCCCCCGCAAACATTGTTATGATTTAATGATTTACTTAGAGAAA
TACCCGAAAGTCTGTTACCCAACCCTTTCtgttatagtagggggaaattt
gttcgtttttttgaggtcgctcgatttttttagtcaaagcacttgttgtA
CAtgtttggaa Run BLAST on NCBI transcript from alignment at scaffold_60:942152..943612 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071537 ID=TCONS_00071537|Name=TCONS_00071537|organism=Clytia hemisphaerica|type=transcript|length=1461bp|location=Sequence derived from alignment at scaffold_60:942152..943612 (Clytia hemisphaerica)
ttccaaacaTGTacaacaagtgctttgactaaaaaaatcgagcgacctca
aaaaaacgaacaaatttccccctactataacaGAAAGGGTTGGGTAACAG
ACTTTCGGGTATTTCTCTAAGTAAATCATTAAATCATAACAATGTTTGCG
GGGGaaacttcttttattcaaatatCCAATTATAACATTTGTCCATCAAG
CACCATTTTTACTGACAACCTGACAAACTACAATCTGGATAAAGATCTAT
CTCAGCGCAAACGTATCATATAACACACAAGAACAAGTTTTTGATAGCGG
CAATAAAACAGTAATAAATTATTTACAGTCGTACGATAAAACTTGATAAA
GGCGTAAAAAGTAAAGGTCTAACCTCAGACCCTCAAATGATATAGTCTGA
ATCATAGACCTCGAAAAACTACACATAGCATATTATATATccataaggag
cacgaatccgttactGGAAGTCAGCAGCCTACAAATGATACTTGAAGTCC
ATGATGTGAATGGCTGTTTAACACTTGCTATGCATCTGTTCTGATTTACC
AACTGGTCTTCCTGGGTCAATTTGCATTCCAAGAATGGAAGCATAATTTC
GTATTATGTGAATTTAAAGATTGAGCAACACTGAGAATAATAGATTCCCA
AGGATTAAagccattgatttcaaagccccgaaaGGGCTAGATCCGATACT
CCTGGATGACAAATGAAGCCACCAATTTCCTATCCAGAACACATGACCTG
TGTTTTCCAAGCAAACATTCTAAATGCGGGGcaaacttaaggcttcactt
tttcttgcttgagaaaggttgaagattcctttctAGCCCTACCACTACCT
GAGCGTTGAAAGAGTCTTGAATTATAAGTTAAGCTAAATAACCACGACAA
ACAACAAGTAAGCAAACAGTACAGCTATGCAACTTATACCTTAAAAGAAT
ATCACGTGTAATTGAATATGTCGATAAAATATGTAACGAAAAAAGCATTT
AAAAAACAAGACTGCAAATCATTATCAAGCAAACTCTTTGTTCTGTATCA
TCTCCGAAAAAAAACAATACGACGGAGTGTTGTCTCTTACCAAAAATGTC
ATGATGAGGTATGAACCTTAGCTCTCCACCTGTGAGGATGACCTGATAAA
TCATGAATTAGAATCACACGATTGTGCCATGAATCGAAATGAAGTAAGAA
AAGCGAAAGCCTATACGATGCCTGCATTCATTTCCTTGCAAGGGTCATGT
TTCATTTTGCGACGTAAATAAATAACGCCtatcaaaacaaataaaccTAT
TCATTATCGTCTTGCGGTGGGTAAAAATGTGTTTTTCGCGAGTAGACGTC
ACAAATAGTGTTCCCctaatcaaaaaaatttgctgACTAGCCTTTGTTTA
CAAACGGATCAGCAGGGGTCGTTCGGACAAAAGAAAAGGTGCTTTTGATT
AGCAAATATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071537-exon-scaffold_60-1491911889:942152..943612 | TCONS_00071537-exon-scaffold_60-1491911889:942152..943612 | Clytia hemisphaerica | exon |
| TCONS_00071537-exon-scaffold_60-1510915933:942152..943612 | TCONS_00071537-exon-scaffold_60-1510915933:942152..943612 | Clytia hemisphaerica | exon |
| TCONS_00071537-exon-scaffold_60-1575043694:942152..943612 | TCONS_00071537-exon-scaffold_60-1575043694:942152..943612 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:942152..943612 . |
Blast
The following BLAST results are available for this feature:
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