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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071545 ID=TCONS_00071545|Name=TCONS_00071545|organism=Clytia hemisphaerica|type=transcript|length=1208bp
cgctcgcaaaaaattggcaataataaaatttttaaacgaaaaaacgtcat
tgacagaaaaagtctgacaaatttaccgactcactgACTCAATTctattg
aatagaccttttatcaaagaggccaccctgttgaataattatgtagtcca
gcagaaaaacaatgatacacccATGCATAATCATCacaatatgcatgaaa
cagtaattatgcattgctgtatcattgtttgtatggctggactacataat
tatttaacagggttgcctctttgaaaaaaagtctattttcGAGAGTCGGT
TGAGCGACGCAatacgaagatatttgtgattgccgccttagtAACCACCA
Aatattaaattccctctgaaaaaactttttcggccatccgccaattattg
aattctcgccaaaatttcttcttttaatgtAGTTGCAATGTCACGTTGTG
TAATTAAAACTCCAGCAAATATCTTGATAACTCCATGTTTCATTGGAAAC
AGCAATAATAATCCAAAGGGCCATTCCAGGAGAAAGAACAAAGAATACGT
AACGCCACTTTCACTTTTGACTAGATGCCAGTAGTGACCTACATAGAGAC
AGTTGTTCAGCCGGGCATAGACTCCAATAATTGCAGTTGGCAACTGGACA
ATATCTTGAAATGGCCCAGAAAGTGAGCCcgaaataaaagaaacaaactG
GCTGCCAAACAGCAGCTGACAGTTGTATGTTTTGTTCAAGAAATTTTAAG
TCAATACTCGCAATGGTTACACAAAATTACTCGTCTTGGAACGGTGAATC
ATCAATCAAATCTTGCTTAAAGGTGATAAATGTTCTTTTGCTTCACTTCA
AATCATGGTAGAAATTCATGGTATATAACTTGATCTGGCAATTAATACAA
TGCAGTGAGTGATCTTAGTTGGGACATGCTATCAACTGTTATCATAGATT
AAGagtaattgaaacaataataaacttcttcttCTCTAATCTATCTTATT
TTTCTTGTCCACACAAAAACACATCCATCTTCCAAACCAAATGTTTAACC
TCAAAAGTGATTCTAGTGAAAGGAGGTTTGTTTTCAACAACATCACGAGT
GTGGTACTGTAGTTTGAATGGAATGATATCAATGAAGAACCATAAATTTC
ATATATAATTTTAGTTTATAACATCAAGAATTGTCTGCTGCTTGCACTTG
CAGTAGAA Run BLAST on NCBI transcript from alignment at scaffold_60:1225917..1227124 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071545 ID=TCONS_00071545|Name=TCONS_00071545|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at scaffold_60:1225917..1227124 (Clytia hemisphaerica)
TTCTACTGCAAGTGCAAGCAGCAGACAATTCTTGATGTTATAAACTAAAA
TTATATATGAAATTTATGGTTCTTCATTGATATCATTCCATTCAAACTAC
AGTACCACACTCGTGATGTTGTTGAAAACAAACCTCCTTTCACTAGAATC
ACTTTTGAGGTTAAACATTTGGTTTGGAAGATGGATGTGTTTTTGTGTGG
ACAAGAAAAATAAGATAGATTAGAGaagaagaagtttattattgtttcaa
ttactCTTAATCTATGATAACAGTTGATAGCATGTCCCAACTAAGATCAC
TCACTGCATTGTATTAATTGCCAGATCAAGTTATATACCATGAATTTCTA
CCATGATTTGAAGTGAAGCAAAAGAACATTTATCACCTTTAAGCAAGATT
TGATTGATGATTCACCGTTCCAAGACGAGTAATTTTGTGTAACCATTGCG
AGTATTGACTTAAAATTTCTTGAACAAAACATACAACTGTCAGCTGCTGT
TTGGCAGCCagtttgtttcttttatttcgGGCTCACTTTCTGGGCCATTT
CAAGATATTGTCCAGTTGCCAACTGCAATTATTGGAGTCTATGCCCGGCT
GAACAACTGTCTCTATGTAGGTCACTACTGGCATCTAGTCAAAAGTGAAA
GTGGCGTTACGTATTCTTTGTTCTTTCTCCTGGAATGGCCCTTTGGATTA
TTATTGCTGTTTCCAATGAAACATGGAGTTATCAAGATATTTGCTGGAGT
TTTAATTACACAACGTGACATTGCAACTacattaaaagaagaaattttgg
cgagaattcaataattggcggatggccgaaaaagttttttcagagggaat
ttaatatTTGGTGGTTactaaggcggcaatcacaaatatcttcgtatTGC
GTCGCTCAACCGACTCTCgaaaatagactttttttcaaagaggcaaccct
gttaaataattatgtagtccagccatacaaacaatgatacagcaatgcat
aattactgtttcatgcatattgtGATGATTATGCATgggtgtatcattgt
ttttctgctggactacataattattcaacagggtggcctctttgataaaa
ggtctattcaatagAATTGAGTcagtgagtcggtaaatttgtcagacttt
ttctgtcaatgacgttttttcgtttaaaaattttattattgccaattttt
tgcgagcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071545-exon-scaffold_60-1491911889:1225917..1227124 | TCONS_00071545-exon-scaffold_60-1491911889:1225917..1227124 | Clytia hemisphaerica | exon |
| TCONS_00071545-exon-scaffold_60-1510915933:1225917..1227124 | TCONS_00071545-exon-scaffold_60-1510915933:1225917..1227124 | Clytia hemisphaerica | exon |
| TCONS_00071545-exon-scaffold_60-1575043694:1225917..1227124 | TCONS_00071545-exon-scaffold_60-1575043694:1225917..1227124 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:1225917..1227124 . |
Blast
The following BLAST results are available for this feature:
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