TCONS_00072077 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072077
Unique NameTCONS_00072077
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072077 ID=TCONS_00072077|Name=TCONS_00072077|organism=Clytia hemisphaerica|type=transcript|length=1142bp
AGAACAGCATGGATTTCATCAGAAGCACATGGCCGACTTTAACTGGAGGA
AGGATTTGGTAGAAATTTCTTGATACAGATAGAACTGAGGATTAGTTAGT
AGTTACAGTCAAGTTGCTTGtccatttttttatttacaattataaatatt
aagatttttttctcttttatttttagaaaaaacctAGACcacaaaaataa
tatcaaatgtCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGG
GCAAGCTGTTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAAAGCCAA
TACAAAATTTTGCACCCAATAATATATCCAGGTCTATTTTACAGTCAAGC
TGTAGATGTTTTCACACTGAAGGTGACGGAGACTTGgcaaactttttaaa
agaagaaattgcttatgaagaagaaaatgtgaCTGACGGGCCAGAATTGC
ATAATTTTACGGTGGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAAC
TTCAATGGAGAAAGAGTTGACGTCGTTTTCAATATCAATGAGAACGAGAA
TGTGGATGAAGGATTGAACATTGAAGAATCGGAATACAGTCAAGACCAAG
ATGATGTCTCTCTACCAGAGGAACTGTACAGTATGTTAATGACGACATTA
CTGGAGCGTGGAATTACCGGAGCTTTCGTGAACGACCTCCTGGATTTCAG
TACGGCCTCAGAACACAAACAGTACGTCAAATTTCTTAAGGAATTACAGG
TATTcgcaaaagaaaaatgaaaatatcacatggaaacttttctatttttt
atatatttcttatTCGCTTTGTAGATATAGAAGTTTATAGTAGTGCATCA
TATTTTTTCTTGGCAAATAAATagttaaatttacaatttacaatatttta
gtGCACTTATATAATATTTGTGTCTTAACCTCAATTTCGAAAATAACCCC
TAAATTTTTACTGAAACGTTCATTTTTAGGCCATGTCATTCACAAAAACG
TTTGGTATCGTTAATGCGGAAATTTTTCCCTTAATTTGTGTTTAAAAATT
CGTCcaagaaagtgaagaagaaaataatgaacttcttgtagaatagcgct
ataattaccatttttacAAGAATGaaacttcaatcttagatc
Run BLAST on NCBI

protein sequence of TCONS_00072077-protein

>TCONS_00072077-protein ID=TCONS_00072077-protein|Name=TCONS_00072077-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MSFARSLFRFSKSCGQAVVCSTSSKTVIRKPIQNFAPNNISRSILQSSCR
CFHTEGDGDLANFLKEEIAYEEENVTDGPELHNFTVDIQGPKVNLSRNFN
GERVDVVFNINENENVDEGLNIEESEYSQDQDDVSLPEELYSMLMTTLLE
RGITGAFVNDLLDFSTASEHKQYVKFLKELQVFAKEK
Run BLAST on NCBI

transcript from alignment at scaffold_70:180369..189607-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072077 ID=TCONS_00072077|Name=TCONS_00072077|organism=Clytia hemisphaerica|type=transcript|length=9239bp|location=Sequence derived from alignment at scaffold_70:180369..189607- (Clytia hemisphaerica)
AGAACAGCATGGATTTCATCAGAAGCACATGGCCGACTTTAACTGGAGGA
AGGATTTGGTAGAAATTTCTTGATACAGATAGAACTGAGGATTAGTTAGT
AGTTACAGTCAAGTTGCTTGTCCATTTTTTTATTTACAATTATAAATATT
AAGATTTTTTTCTCTTTTATTTTTAGAAAAAACCTAGACCACAAAAATAA
TATCAAATGTCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGG
GCAAGCTGTTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAAAGCCAA
TACAAAATTTTGCACCCAATAATATATCCAGGTCTATTTTACAGTCAAGC
TGTAGATGTTTTCACACTGAAGGTAACAGAACAAAAAACCTTGCCTTGTA
GGGCCACATTTTTGCACCCAAAAAGGTGCGCATGCTACGTTCAAATCATT
GGGCTCCTCCTGAGAAAATCCAATATAATGGGGTGGACGACAGGAACTTT
AAGACTAAAAATGCACTTGGAACTCTAGCTAGTCAGATTTCTGTAATGCT
ATATATATACCTAAGTTCCGCTCCATTTTGTAGTCATATAACATATACTG
TACCAGACGTCCGCGCTCAATAGGATCGTTAAGTAATTCATCGATTACAT
ATCGATCCGTCATCAAGCCGTTCCGATGATCGACCCTATCGAGCGCGGAT
GTCTGGACTGTAACAAAATGTGTCAATTTTTTTTTTTTTTGAATTTCAAA
AAAATATTTCAATCTGCTGCCCCCTGTAATAGAAACTTTAACCCTAGGCT
GCATTTTTGTAAATCTTTGACAGTAGGAAGAAGGACCCTGCCGACGCACC
GGACTGTCCGGTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACAC
CGGATGCAATAAGTCCAGTGTCAGAGTCCAGTGTCAGAGTCCGGTGTTGC
ATACAGGGAATTTTGGACGCCAGACATTTATGAAACAAAAAATTAAGAAA
CACCGGACCCACGCCGGACTTGTCATGTCCGGTGTTTTGATAGATTGTCC
GGTGGAAAAAAATATCCTTCTTCAACACCGGACATCTGACTTCTTTAAGT
CCGGTGTAGAGATTGTCCGGTGGTAAAAAAAATTCTCATTTTACACCGGA
CTTTCGCGTGTCCGGTGTTCGTTAAGTCCGGTGCGTCGGCAGGGTCCTTA
GGAAGACTATATGTATATGTAGACCTTTTCCAATGACAATGTCATGTTTA
AAAAAATTAATGAACACTAAAATAATCATGCATATCTTATCAAGTTATGA
CTTTTTTTAGGACTCAAAACTTTTTCATTAGAAAGAGAAACTGAGAGAAA
GGCTAAACTTAGATTTTGATGAGTCATTCGTTGAGTTTGGTCCGCAATAT
CAAAAGTCATGCTTGAATAAGAAAATCATTTCTATTATTAAATTCTTATT
GAACAGAGACAGTGAATTATTACCTTTCGCCCAAATAAAGTGTTTTATAA
ATTGCGACTAAAATTAGAAAATCTTGAAAATATCCAATTTATCCTGAAAT
TGGATCTAATTTTTGACCCCAAAATTTCGAGAGTGATGCTGATTGGGCTC
TTCCAGAAAAAAAATTGAATATGGGGAGTGGAAGATCTAACACTTTTTGG
AAATATACCTCCCCCCCCCCAGGACAAGCATAAATTGACCCCCGGGACAT
TCATAATTACCCTAATCAGAGCAATTTTGCCTGCTAAACAAGGCAAATTT
TGTAGATTTTTCACTAATTCTAACTTATTTCTTGCACACCTGGTATTGTT
AACCTGGCTTTAGGGTACTAAAATCTTTAGGCTTGAATTTAATTTGAGAG
ATTAAGATTATTCTAAACTTGTACTCAAAAAGTTTTTTGGTTTTGTTTTA
GGTGACGGAGACTTGGCAAACTTTTTAAAAGAAGAAATTGCTTATGAAGA
AGAAAATGTGACTGACGGGCCAGAATTGCATAATTTTACGGTATGATTAT
CGTACATTATTATCTGTAACAGTACTGTACGCACCTCTAAAAGTTTCCAG
AGTCTTACTTAAGTCTTATAGTTTGTGGTTTATACAATTAGGGTGAAGTT
TTCTTTTAGTCAACTTCCTGTAACCTCTATTGGGCTCTTCCAGAAAATGT
TCGTACATGAGGGGTGGAGGATATTTTGTCTGGGGGGTAGCAAAAAATCA
TCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTCCGGGGGGGGGGGTAAATTTGCTCTGTCC
GGGGGTAATTTGGGTTGTCCGGGGGTCAACTGATGCTTGTCCGGGGACCA
AAAGTCACTTTGTTCAGGGGATAAATCACTGAAAATTGTTATATCCTCCA
CCCCCCATATTCTAGCTTTTTCTGGAAAAGCCCATTATGATTTTGCTTCT
AATTAAGAATTTGTCATGATAGACCGTTTGAAAAAAAAAATTTGAAATAG
ATCATTTTTCTTTTATACGTCATTTATAGACAATGAAATTGTATGACTTA
TATTTTTTAGGTGGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAACT
TCAATGGAGAAAGGTAAAAACTTCACCAAATTTTTATTTAATTCTTGAGA
AAGATAGAATGTGAGCTTAGCTATCTTAGCTATCTGGAGAAAGAATGTGG
TCTACATATCTGCATTACTTTGGTTATTGAATTTCCTAATAGAAAAGGTT
CACGAGTATATACACGTATTTTTTTTGTAAGAACATCCAAACATTTTGAA
ACCTCCAGATATTCTTAACTTTTTGAGTTTTTAAAGCCTAAAAATGTTTT
TATTTTCATCAATGAGTGAGTGTTTTTATCCATTCTCCTAAGAAATTGGG
TGTTTTAGGGTCAACAAAGCCTTAAATGTTCTTAACTTATTCTCAATATT
TTGACCATTGAAGTCTTATGTTCTTATATAGTTTGTTCTTATAAAAGAAG
AAACGTGTACCTTAACCCTTTCCGGACGCATGATTTCACGGTTATATGAC
GCAAACAAAAATTTGATTTTTGACTGGCTTCACTAAAATTGCAATAGAAA
GTGATCGATAAAAGATATCACGATAAGTAATACCTTGTTTTTTTCACATG
TAATAAGGGTTTTGAAATACCAAAAAAAAATTTTTAAATATGGCTGACAC
CTGGTCACGTGACCTAAAAATCGGCAGATTTTTTTTCGGAAAGGGAAGAT
TTTTGACTTTGAATAAAGAAATAGAGCTAAAGGCATTTACTTTACGCCTT
GAACTTTGAATATGATTTAGAGATTTGAATTACTGGCCGGGTAAAAAAAA
TTTCATGTCAAAAGCTTTCCAAGAATCTGAGTAAAGTGATTTTTTGTCCA
AATTTTTGAGCAATTTTTCCCTTACAGATTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGAGTAAATTTACAACAAACATTGAAAATTTATAATTCTAGTTGTAAACA
AGATATCGAAAAGCGGTTTTTTGCAGGTTACGGGAAATTTATGTCAAAAT
CATTATTCAAAACCATGTTATTGTATTTTGGCGCGAAAACTGTTAAAATC
TTTTACAAAGCTATCCCGTGCGTCATATAGGAACACGATTCATGGGCCAC
CCAGTGGCCCGTGCGTCCGGAAAGGGTTAAGGGAAGAAATTTTCGTGGAA
TTTAATTTTGTGGTTGAGAAGAATTTTTGTTTAAAAAATATGGCTCATTT
TGCCCCAAAAACACCAATCAATTCTATAGGTGATTTTTTAATCATGAGAA
TATTCTTGTTTCGCGGATTTGTCAAAAAACTGCGAAATTAAATTCCGCAA
AAATTTGTTCCCTTAAGGTACCTGTTTTTTTTAATTTCATGCAGAGTTGA
CGTCGTTTTCAATATCAATGAGAACGAGAATGTGGATGAAGGATTGAACA
TTGAAGAATCGGAATACAGTCAAGACCAAGATGATGTCTCTCTACCAGAG
GTATAATATAACTCAATTTGAGTCAAAAATGATATACTGCACGTAAGCAC
GAAATAATATATATAATATCCTACTCAGCGAGGAGGTAAAGCCATTTCAA
TCTTTTTCCAAGCAACTCTATTTTGCCAGATGTTGAACATGGCCGTCCAA
CTTTAGTGAAAGGTCCAAAAGAGGCTTAAAATTGACTCTTTTCAGTACAG
AAGAAATAAAACAAAGCTTTAAAAGCTAATTAGGGCGAAAGAAATTACCC
TTATGGTACATTTTTTGAAAATGTTATTTTAAGTTAAGAATGGCCAGAAA
TTTTGCCCAAAAAGATACGATGAATTACGATGATGTTTTCAAAATTTCGC
TACTACTTTTTACAGTCACTACATAACCCCCTAAATATAAGTCACACGTG
CCCTACTTTATTTTTCTGAATAAGGTACAACTGCTTTATCAATGCAGGCC
TTTACGAATTCATGTAAACTCATACTCATACTCATCAGAGACCCAAAAGA
CTTGGTTCTTCTAGAAATCAAGAATTGTTACATTTAAGTGAACTTATTTT
GGCTAATTTGGCAAGTTTAGTCAAAGTTGTCGTTAATTTTCTTTCTTTTT
TTTCGTTTTCCAAAATAACCCCTAAAATTCATCAAAAGGTCATTTCTCGC
CCAAATTGGGCTCTTCCAGAAAATGTTCGTACACCCCGGGTGGAGGATAT
ATTGTCCGGGGGGTAGCAAAAATTCGTCAAAATTTACCTTGTCCGGGGGG
TAATTTTGCTCTGTCCGGGGGTAATTTCGGGTGTCCAGGGGGTCAGCTGA
TGCTTGTCCGGGGGGTGAAACCCGTTGTCCAGGGGGTTAAAAGTCACTTT
GTCCGGGGGGTAAATTTGCTCTGTCCGGGGGTAATTTCGGGTGTCCAGGG
GGTCAGCTGATGCTTGTCCGGGGGGTGAAACCCGTTGTCCAGGGGGTTAA
AAGTCACTTTGTCCGGGGGGTAAATCACTGAAAATTGTTATATCCTCCAC
CCCCCGTATACAAGTTTTTTCTGGAAGAGCCCATTGAAAAGTTTAACCGT
TCGCCTAAATAAGTTCTCGCCAAAATTATCTCCCCTTCGTGTAACAACAT
TATTCATAAAAAAGTTTTAAATTCATGATATGCACCATTGCAATGTCTTC
CACGGACCCAACAGCTGATTGGTTGAAAGTGCAGTAGGTTGCCCCCCCCC
CCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGCATTTGGTAATGAGTGAATCTATTCTGTTCTAAA
ATTATGTACTAATAATAACTTCTCCTAGTTTTCGCACATCAATTATATTC
AGATAATATTGATTCAGATTGATTTTGCTTGAAGATATTTGTTATGTATT
GTCTTGCAAAAGCAACGGATAATATTTACTTGATCCGTAAAAAATGTCGG
CCGTTCTTTTCAATTCTTTTTCGACATTTTTAACGTCGAAGCGTTCTCTA
TTGTTCTGCTTGGATGATTTGTTAAGATTCGTTTACTAGAATGTTACGTT
GAGATTCCCTCCAGATCGATACAATCCACACTTTTATGTTATCAATATCA
ATATGTCTTATACATACTCAACTTCCCAACCATTTATTGTGGTTTACTAC
CAAAATTGGGACTCCAGTGCAGTATTCTCTGAATTGGGTTAAACTTATTC
CCACAGTTAGACAAGTGAGAGTTAGACTTGCGTAACCTTTCTGCATCTTT
ACCAAATATTACCAAGACTACATACAGTACTATGAAAAGAAGTGAGATTT
GATGAAATTGCTAACGCATTAGGCTCTTCCAAAACATGTTCGTACATGGG
GGTGGGAGTGAGGATATATTGTCCGGTGGGTAGTGAATAAATTGTCCGGG
GGAGTAAATGCGCTCTGTATCGGAGTGATTTTGAATGTCCGGGGTTCGAC
TGATGCTAGTCCGGGCGGTTAGACTCAGTTGTCCAGGCAGGGGGGTAAAT
GTTACAACGCTAGGGGGTAAATTTTCTAAAATGTTATACCCTCCACCTCT
AATATTCTTTTTTTTCTGGAAGAGCCCATTAGGATCTCTAAAAGTTTGTT
TTTTTCATCGTCTTCAGGAACTGTACAGTATGTTAATGACGACATTACTG
GAGCGTGGAATTACCGGAGCTTTCGTGAACGACCTCCTGGATTTCAGTAC
GGCCTCAGAACACAAACAGTACGTCAAATTTCTTAAGGAATTACAGGTAT
TCGCAAAAGAAAAATGAAAATATCACATGGAAACTTTTCTATTTTTTATA
TATTTCTTATTCGCTTTGTAGATATAGAAGTTTATAGTAGTGCATCATAT
TTTTTCTTGGCAAATAAATAGTTAAATTTACAATTTACAATATTTTAGTG
CACTTATATAATATTTGTGTCTTAACCTCAATTTCGAAAATAACCCCTAA
ATTTTTACTGAAACGTTCATTTTTAGGCCATGTCATTCACAAAAACGTTT
GGTATCGTTAATGCGGAAATTTTTCCCTTAATTTGTGTTTAAAAATTCGT
CCAAGAAAGTGAAGAAGAAAATAATGAACTTCTTGTAGAATAGCGCTATA
ATTACCATTTTTACAAGAATGAAACTTCAATCTTAGATC

Coding sequence (CDS) from alignment at scaffold_70:180369..189607-

>TCONS_00072077 ID=TCONS_00072077|Name=TCONS_00072077|organism=Clytia hemisphaerica|type=CDS|length=2820bp|location=Sequence derived from alignment at scaffold_70:180369..189607- (Clytia hemisphaerica)
GAACTGTACAGTATGTTAATGACGACATTACTGGAGCGTGGAATTACCGG
AGCTTTCGTGAACGACCTCCTGGATTTCAGTACGGCCTCAGAACACAAAC
AGTACGTCAAATTTCTTAAGGAATTACAGGTATTCGCAAAAGAAAAATGA
AGTTGACGTCGTTTTCAATATCAATGAGAACGAGAATGTGGATGAAGGAT
TGAACATTGAAGAATCGGAATACAGTCAAGACCAAGATGATGTCTCTCTA
CCAGAGGTGGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAACTTCAA
TGGAGAAAGGTGACGGAGACTTGGCAAACTTTTTAAAAGAAGAAATTGCT
TATGAAGAAGAAAATGTGACTGACGGGCCAGAATTGCATAATTTTACGAT
GTCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGGGCAAGCTG
TTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAAAGCCAATACAAAAT
TTTGCACCCAATAATATATCCAGGTCTATTTTACAGTCAAGCTGTAGATG
TTTTCACACTGAAGGAACTGTACAGTATGTTAATGACGACATTACTGGAG
CGTGGAATTACCGGAGCTTTCGTGAACGACCTCCTGGATTTCAGTACGGC
CTCAGAACACAAACAGTACGTCAAATTTCTTAAGGAATTACAGGTATTCG
CAAAAGAAAAATGAAGTTGACGTCGTTTTCAATATCAATGAGAACGAGAA
TGTGGATGAAGGATTGAACATTGAAGAATCGGAATACAGTCAAGACCAAG
ATGATGTCTCTCTACCAGAGGTGGATATCCAGGGTCCGAAAGTTAATTTG
TCAAGAAACTTCAATGGAGAAAGGTGACGGAGACTTGGCAAACTTTTTAA
AAGAAGAAATTGCTTATGAAGAAGAAAATGTGACTGACGGGCCAGAATTG
CATAATTTTACGATGTCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTC
CTGTGGGCAAGCTGTTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAA
AGCCAATACAAAATTTTGCACCCAATAATATATCCAGGTCTATTTTACAG
TCAAGCTGTAGATGTTTTCACACTGAAGGAACTGTACAGTATGTTAATGA
CGACATTACTGGAGCGTGGAATTACCGGAGCTTTCGTGAACGACCTCCTG
GATTTCAGTACGGCCTCAGAACACAAACAGTACGTCAAATTTCTTAAGGA
ATTACAGGTATTCGCAAAAGAAAAATGAAGTTGACGTCGTTTTCAATATC
AATGAGAACGAGAATGTGGATGAAGGATTGAACATTGAAGAATCGGAATA
CAGTCAAGACCAAGATGATGTCTCTCTACCAGAGGTGGATATCCAGGGTC
CGAAAGTTAATTTGTCAAGAAACTTCAATGGAGAAAGGTGACGGAGACTT
GGCAAACTTTTTAAAAGAAGAAATTGCTTATGAAGAAGAAAATGTGACTG
ACGGGCCAGAATTGCATAATTTTACGATGTCTTTTGCAAGAAGTTTATTC
AGGTTTTCAAAGTCCTGTGGGCAAGCTGTTGTTTGTTCAACCTCATCTAA
GACTGTCATAAGAAAGCCAATACAAAATTTTGCACCCAATAATATATCCA
GGTCTATTTTACAGTCAAGCTGTAGATGTTTTCACACTGAAGGAACTGTA
CAGTATGTTAATGACGACATTACTGGAGCGTGGAATTACCGGAGCTTTCG
TGAACGACCTCCTGGATTTCAGTACGGCCTCAGAACACAAACAGTACGTC
AAATTTCTTAAGGAATTACAGGTATTCGCAAAAGAAAAATGAAGTTGACG
TCGTTTTCAATATCAATGAGAACGAGAATGTGGATGAAGGATTGAACATT
GAAGAATCGGAATACAGTCAAGACCAAGATGATGTCTCTCTACCAGAGGT
GGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAACTTCAATGGAGAAA
GGTGACGGAGACTTGGCAAACTTTTTAAAAGAAGAAATTGCTTATGAAGA
AGAAAATGTGACTGACGGGCCAGAATTGCATAATTTTACGATGTCTTTTG
CAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGGGCAAGCTGTTGTTTGT
TCAACCTCATCTAAGACTGTCATAAGAAAGCCAATACAAAATTTTGCACC
CAATAATATATCCAGGTCTATTTTACAGTCAAGCTGTAGATGTTTTCACA
CTGAAGGAACTGTACAGTATGTTAATGACGACATTACTGGAGCGTGGAAT
TACCGGAGCTTTCGTGAACGACCTCCTGGATTTCAGTACGGCCTCAGAAC
ACAAACAGTACGTCAAATTTCTTAAGGAATTACAGGTATTCGCAAAAGAA
AAATGAAGTTGACGTCGTTTTCAATATCAATGAGAACGAGAATGTGGATG
AAGGATTGAACATTGAAGAATCGGAATACAGTCAAGACCAAGATGATGTC
TCTCTACCAGAGGTGGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAA
CTTCAATGGAGAAAGGTGACGGAGACTTGGCAAACTTTTTAAAAGAAGAA
ATTGCTTATGAAGAAGAAAATGTGACTGACGGGCCAGAATTGCATAATTT
TACGATGTCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGGGC
AAGCTGTTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAAAGCCAATA
CAAAATTTTGCACCCAATAATATATCCAGGTCTATTTTACAGTCAAGCTG
TAGATGTTTTCACACTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044765XLOC_044765Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072077-exon-scaffold_70-1575043694:189236..189607TCONS_00072077-exon-scaffold_70-1575043694:189236..189607Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1575043694:187618..187706TCONS_00072077-exon-scaffold_70-1575043694:187618..187706Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1575043694:186495..186547TCONS_00072077-exon-scaffold_70-1575043694:186495..186547Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1575043694:185008..185113TCONS_00072077-exon-scaffold_70-1575043694:185008..185113Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1575043694:180369..180890TCONS_00072077-exon-scaffold_70-1575043694:180369..180890Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1510915933:189236..189607TCONS_00072077-exon-scaffold_70-1510915933:189236..189607Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1510915933:187618..187706TCONS_00072077-exon-scaffold_70-1510915933:187618..187706Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1510915933:186495..186547TCONS_00072077-exon-scaffold_70-1510915933:186495..186547Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1510915933:185008..185113TCONS_00072077-exon-scaffold_70-1510915933:185008..185113Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1510915933:180369..180890TCONS_00072077-exon-scaffold_70-1510915933:180369..180890Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1491911889:189236..189607TCONS_00072077-exon-scaffold_70-1491911889:189236..189607Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1491911889:187618..187706TCONS_00072077-exon-scaffold_70-1491911889:187618..187706Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1491911889:186495..186547TCONS_00072077-exon-scaffold_70-1491911889:186495..186547Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1491911889:185008..185113TCONS_00072077-exon-scaffold_70-1491911889:185008..185113Clytia hemisphaericaexon
TCONS_00072077-exon-scaffold_70-1491911889:180369..180890TCONS_00072077-exon-scaffold_70-1491911889:180369..180890Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072077-proteinTCONS_00072077-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_70supercontigscaffold_70:180369..189607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
107.312	101.017	32.023	13.355	20.3243	19.6788	19.289	29.5305	15.1801	11.1719	5.85067e-09	6.38295	4.02868	12.8471	11.3514	10.4304	30.3735	27.8306	2.0408	3.74844	27.1625	26.6383	68.6307	61.1263	14.7532	18.2792	21.8234	14.2684	42.1248	39.8342
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
Vocabulary: Cellular Component
TermDefinition
GO:0005759mitochondrial matrix
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005759 mitochondrial matrix
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072077 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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