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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072758 ID=TCONS_00072758|Name=TCONS_00072758|organism=Clytia hemisphaerica|type=transcript|length=888bp
NNTCATTAAATTAACTAAGTGAAAAAAGCaattaaatgaataaataatta
aaagtaATTATCCTAGAGTGACACATTGTTGacaaaaatgaactttaaaA
CAAAGGACACTCCACATGAGAATTGAGAAACTGATGTGTCACAAGGGACT
GAatgaaagaaaagaacaaaggaaaacaAGTGAGACTCAATGAAAActgt
gaaataaattttttggtttttctaattttataatttttatggaAACATAT
TCAACAATACCAANNNNNNAAGCAGCGGCGGCGGTGAGTAGAGGGAGGCG
GTCGTAATTGAACACCGCCTTCAAACAACCACCCTCGTCCAAAATATGTT
AAGCTTCGAAACATGGCGGAGCTTAAAAGAGGCGcgaaaaaacataaaca
aatatggcAGAGTTCAATATTCGATTCACATCATAACCATAATGCCAAGT
TTTAGAGAGATTAGAGAAGCTCTTTTATTTGGTTACTATGATAATATTTT
AGATGATCAagaatttttgttgttgtatgACTTACATAGATCAAGAAACC
CAGATTTTCCATACTGGAGACATGCTGAATTTGACTTGGATAAGCTAAAT
GAAGATGAATGTATTGCTAACTTCAGGTTCAAGAAAAATGacatttatat
tttgaaagaacTTTTTCAAATACCAGATGAAGTAGTTTGCTATAACAGAT
CAAAACTCGATGGTATTGAAGCGTTGTGTATTTTTTTGGGACGATATGCA
TATCCAGGATAATCCAGTAAGATATGGATCCATGATACCAATTTTTGGAA
GGTCAGTTCCTGAGTTGTGCATGACTAATTATAACATTTTAAACCATATT
CATAATAACTATGGCAGACTTTTATCAGGATTTAATCA Run BLAST on NCBI protein sequence of TCONS_00072758-protein >TCONS_00072758-protein ID=TCONS_00072758-protein|Name=TCONS_00072758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MLSFETWRSLKEARKNINKYGRVQYSIHIITIMPSFREIREALLFGYYDN
ILDDQEFLLLYDLHRSRNPDFPYWRHAEFDLDKLNEDECIANFRFKKNDI
YILKELFQIPDEVVCYNRSKLDGIEALCIFLGRYAYPG Run BLAST on NCBI transcript from alignment at scaffold_83:23810..24697 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072758 ID=TCONS_00072758|Name=TCONS_00072758|organism=Clytia hemisphaerica|type=transcript|length=888bp|location=Sequence derived from alignment at scaffold_83:23810..24697 (Clytia hemisphaerica)
TGATTAAATCCTGATAAAAGTCTGCCATAGTTATTATGAATATGGTTTAA
AATGTTATAATTAGTCATGCACAACTCAGGAACTGACCTTCCAAAAATTG
GTATCATGGATCCATATCTTACTGGATTATCCTGGATATGCATATCGTCC
CAAAAAAATACACAACGCTTCAATACCATCGAGTTTTGATCTGTTATAGC
AAACTACTTCATCTGGTATTTGAAAAAgttctttcaaaatataaatgtCA
TTTTTCTTGAACCTGAAGTTAGCAATACATTCATCTTCATTTAGCTTATC
CAAGTCAAATTCAGCATGTCTCCAGTATGGAAAATCTGGGTTTCTTGATC
TATGTAAGTcatacaacaacaaaaattctTGATCATCTAAAATATTATCA
TAGTAACCAAATAAAAGAGCTTCTCTAATCTCTCTAAAACTTGGCATTAT
GGTTATGATGTGAATCGAATATTGAACTCTgccatatttgtttatgtttt
ttcgCGCCTCTTTTAAGCTCCGCCATGTTTCGAAGCTTAACATATTTTGG
ACGAGGGTGGTTGTTTGAAGGCGGTGTTCAATTACGACCGCCTCCCTCTA
CTCACCGCCGCCGCTGCTTNNNNNNTTGGTATTGTTGAATATGTTtccat
aaaaattataaaattagaaaaaccaaaaaatttatttcacagTTTTCATT
GAGTCTCACTtgttttcctttgttcttttctttcatTCAGTCCCTTGTGA
CACATCAGTTTCTCAATTCTCATGTGGAGTGTCCTTTGTtttaaagttca
tttttgtCAACAATGTGTCACTCTAGGATAATtacttttaattatttatt
catttaattGCTTTTTTCACTTAGTTAATTTAATGANN Coding sequence (CDS) from alignment at scaffold_83:23810..24697 >TCONS_00072758 ID=TCONS_00072758|Name=TCONS_00072758|organism=Clytia hemisphaerica|type=CDS|length=417bp|location=Sequence derived from alignment at scaffold_83:23810..24697 (Clytia hemisphaerica)
TTATCCTGGATATGCATATCGTCCCAAAAAAATACACAACGCTTCAATAC
CATCGAGTTTTGATCTGTTATAGCAAACTACTTCATCTGGTATTTGAAAA
AgttctttcaaaatataaatgtCATTTTTCTTGAACCTGAAGTTAGCAAT
ACATTCATCTTCATTTAGCTTATCCAAGTCAAATTCAGCATGTCTCCAGT
ATGGAAAATCTGGGTTTCTTGATCTATGTAAGTcatacaacaacaaaaat
tctTGATCATCTAAAATATTATCATAGTAACCAAATAAAAGAGCTTCTCT
AATCTCTCTAAAACTTGGCATTATGGTTATGATGTGAATCGAATATTGAA
CTCTgccatatttgtttatgttttttcgCGCCTCTTTTAAGCTCCGCCAT
GTTTCGAAGCTTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072758-exon-scaffold_83-1491911889:23810..24697 | TCONS_00072758-exon-scaffold_83-1491911889:23810..24697 | Clytia hemisphaerica | exon |
| TCONS_00072758-exon-scaffold_83-1510915933:23810..24697 | TCONS_00072758-exon-scaffold_83-1510915933:23810..24697 | Clytia hemisphaerica | exon |
| TCONS_00072758-exon-scaffold_83-1575043694:23810..24697 | TCONS_00072758-exon-scaffold_83-1575043694:23810..24697 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_83 | supercontig | scaffold_83:23810..24697 . |
Blast
The following BLAST results are available for this feature:
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