TCONS_00072770 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072770
Unique NameTCONS_00072770
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072770 ID=TCONS_00072770|Name=TCONS_00072770|organism=Clytia hemisphaerica|type=transcript|length=4277bp
TGTGCATCGACCACAGAGTAGAGTGAAGAAGAGTAATAAAATTGAGCTGG
AATTCATTTCAGACATTGAAACATGAGATTCGGGTTCGCTTTACTTCTTC
TAGTAGCCTTTGCCAGCGCATGGGTAAAGCAAATGGAGAACGATGGTATG
TTTGAAGGAGACATGTTGTTGACACCTGATCAACAGATGGCTGTTCAAAA
TGGATTCACTAGCATCAAGAAAAATTTCTGGCCAAGAACCATTTATTATG
ACTAGGAACCTACGCTAGCTAACGAGCGGAGTATTTTGGATGCGATAGCC
GATTATGAGAAGTACACATGTTTCAAATTCGTGAAAAGAACGAACGAGAA
AGATTACATCTATTTCTTCAAAGGGTCAGGATGTTTTTCTGGAGTTGGAT
ACTTTCCAGGCTCAGGGAAACATTCAGTATCCATCGGACCTGGGTGTTCA
TCCAAGGGTGTGGTCATTCATGAAATCGGACATCGAATCGGAATCTACCA
CGAACAAGGGAGAGTTGACAGAGATAAATACATCAACATCCATTATGAGA
ACATTGTTGAAAAATACAAATACGCTTTCCGAAAATTCTCATCATCACAA
GTGACGTCACACGGCACAATTTATGATTTCANCTTTCCGAAAATTCTCAT
CATCACAAGTGACGTCACACGGTACAATTTATGATTTCAGAAGCGTGATG
CATTATGGGTCGAAAGCCTTCTCAAAGAATGGGAAACAAACCATCACGAC
CAAAGACCCAAAATATCAACACCAGATTGGTAATCGACAAGGGTTCAGTG
AACTTGATAAAATACAAATCAATCGAATGTATAAATGCTCAGAAGCCCCG
CCAACAAACACACCAAAACCAGCAACTGTTCCCACTCAAGCACCCAGTGG
ACCCAAAGTGGTTTTGAAGCATGGTCACTGGAGAAGTCTTTCATTGAACA
ATGCAGGAGAGCTTATCTTCACCACCCGCTGTAAACACGCTTTCGAGAAA
ATCGATGGAGGACATTTTCGTGTACATGGTACATGGAGATGTATCGAGCC
CGGAAGAAATGATGTTTTGATGGCAGGTAGGTCAATTTAGGTCATATTTT
GATACTTTGATATGATATTTTGTCAATTACCTATTaggtatttaaaaata
caacCTAACGTAGATATCTTTCAAGTTGAACAGTTTCGAATCGAAATAGA
AGCAAACGAGGAACCCCATAAACAAATCATTCTTGGTCGTTTacgccttt
ttttataagaacatccaaaattttgaagcctttggatgttgagttttaag
cctaaaaatgttcttaacatgttcttattttcaccattttttgagcattt
gtGCCCATTTTTTCTAAGNaaatgttcttaacatattcttattttcacca
ttttttgagcatttctgcccattttttctaaaaaaccgGCTGGTTTAGAG
TcgtcaaagccttaaaatgttcttaacttgttcttaacatttcggccatC
AAAGccgtttgttcttataaaaacgtgtatcaaaTTAAAACTAGGTACCC
CTTAATTGATATAAGATGTAATCAAATGATATGATTAGGGGTCCCATAAA
CAAATATTGACCGTTTTATCAAATTTAAACTAAGGTACCCCTccattttt
aggaattttaatCTTTAAAAGTTAATTTTCAACTCACAATCTAATAGGTA
ACAAGTGTGTATCGAATTACGAAAGGACGGACATCCAACCAGACGGTTCT
TTCTCCATCCTTCACAAACCTTCTGGCAAATGTATCCATCCCAAAGGTGG
AAGCTCGTACCCCCGTGACGGCACTGTAGCGCTGATTTATAGAGGTTGTA
GTGGAAAGCGTCTCAAATTCAAACAAGAAGAAATATAAcacatttttgtt
tgtttgtagcattttttttcatagaactGNTAGCGCTGATTTATAGAGGT
TGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAATATAAcacatttt
tgtttgtttgtagcatttttttcattgaaCTATTCATCTAGAATATAAAC
TTTAGTCTTTAAAACGACTGGAAAAGAAAAGATATTCGAATGACAATCGT
TGTCGAAAAAACATTCAAATGACAAAACAGTGGCCTGTCCACCGGTGTTT
AGCCATccttacaaaaatattttatcaaaacacaTCCTACGAAAGGAAAT
TGATTTGAAGATTTTAATAAaaccttcttcttctccttctgATATTTTAG
CATTACTAGGGCAAACGTTTTTGTCGCCAAATTTACCAGGAAGTTCCTTT
TCCGAATCTAGACAGGCTATTTTTGATAACCTCTCCAAAAGAACATGGAT
TTTAACAAATGTGTATACAGTGTAGACAACTGTCGGACCCATAATCATCA
ATATTGGTAACTCATAGCAACTAGTAGTAAACACTaattatttttctcac
aaaaatGGCTGCTCCCTATTATTTGCACACAAGTCGTTACAAAATAATGA
GACAGGATAATTACAAAACCATTGAGCTCGCCGATTTGCTTTATTTCTCG
AAAATATTAACACAATGAAAGTCATCAACTATATACTAACTTGTGAAGTC
AAATGAGAAAGTGAAACGTATCAAAAAAATCtccgaaaatttatttgaaa
aacaGATGTAGAACAAATGCTTTGGAAAGGGAGTACAGTGCGGAACGAAA
ATTTcgcaagaaaaaataaaatccacAATATGGAATCGAAGGAGATCTAC
CAATACAAGGATATTGTACTACGGGAAAAGCCGTTAACAGCTTTCAAACC
GAACTTAAAAATCGTACAAAATATACGGCGAATCGAAAATGAGTTACGAC
GTCAACAAACCCAATACGACGATAAAACACAATGGATACGTAACGTCGTT
CAATTACGAACTCATCAACGACAACGTATCCGAAATTTAACAAACAACTA
CCGGCATCATACAAAAACCGATTTTACACCGATCAGGAAAAAACACGACA
ACGACGTCTATTGTCGGATCTTAGGACAGGCATATTGCCGAGAATGTAAT
CTAAAAGTCAAAATTGAAGAACGTAAACAACAGACCAAGAATTTTCTCGA
AAACAACATCGAAACAGCAGATAAACCTTTGACGTCAAAAGAAAAAGCCG
TCTTGGCGATTCTACCGACGACGACCGTCGATAAACAACCGGGTTTAGAA
TATACTCAAAAATACAATGAAGATTTGAACCAATACAGACTTATTCCTTT
GCTGAGTTCTGACGAGCCGTTGAAAAAGACGTTTAAAAAGGCGGCACACA
CTGTTCAAAATGGTCGTATCATTAACATTGTGAAGAAAACTGacagtgaa
aaaaaatcagaaaaatcaaaatccgAAACAACAACGAATAACAATAAAGA
TACCAAAAATTTAGTGAAAGAAACTGCAACTCCGCCAAATTCACTTCAAA
CGCCACCACCCACAAGGGCAACATCCACCATAAGCCAACAAGAAAAACCG
CCCATAAGATCAGGAGATTCTTCTTCGTTTAAACCGCGTACAGACTTAGA
ATGGTTCCATGATATTTCGAAAAGACGTAAGAGCAACGTCGTACAAGATC
GCAGACTTCCAGATTATTTCGATGTCATTCAACTAGCTGAGAAACTATCC
TCTCTATTTCGCGAACGCCATTTACCGCCTGAGCGGAGCTTCAGTCGAAT
AAGCAATGTTTCATCAGTTGACCTCGATCCAAATGATTTGGGAAGAATCC
CAATGGATAGAGGTACATTAAAATCACGTGCAGTTACAAGACAATCTTCA
GCTATTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAGTAGCATGAATCA
AACATCAAATATTCCTTTTGACGGAGAGCAAGTTAACTCTGAACTCAAAG
CAGAGACAAATGGAGATTCTGGGACACAAGGCGTTGATTGCAACAGCCGG
AACGAGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAATTATTCGGATAG
TCATATTGGAGACAATTTACGAGACGAACTTGAGGATATTAGATCACTTC
TGAATCTTGGTGGAGGAGACAGTGATGTCGAGGATGAGAGAGATGTTGGT
CGAAAATTTTCAGACGATGAGTTTTCATCAGATGAGGATGAAAATTATGG
AGGAAGGTTGCTTCCGATCATCCCACCCACTGTCAATATGACTGCGTTTA
GAAACATTTATAAAGAATATAACGATTATTAGACAATTGAAGGAAATATA
TACTTTGTAAATCTCTTATCTTACCCT
Run BLAST on NCBI

transcript from alignment at scaffold_84:169188..176726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072770 ID=TCONS_00072770|Name=TCONS_00072770|organism=Clytia hemisphaerica|type=transcript|length=7539bp|location=Sequence derived from alignment at scaffold_84:169188..176726+ (Clytia hemisphaerica)
TGTGCATCGACCACAGAGTAGAGTGAAGAAGAGTAATAAAATTGAGCTGG
AATTCATTTCAGACATTGAAACATGAGATTCGGGTTCGCTTTACTTCTTC
TAGTAGCCTTTGCCAGCGCATGGGTAAAGCAAATGGAGAGTAAGTAAATT
CTACTTTAAACCTTCGCTCGCTCCGGGCACATCACGCTCTACTCTAAAAG
GATATGGCGAATTTAATGATCTGACCTACTTCTTCAGCCAAAGCATTCAA
AACCTCGTTGCCATTTGCCTGTAATTCAAAGGGAAACTGACTGCCTGGGT
TCTAATGATTATGTTTATAATCAACATTTGTTTCGGTGCGATtattttgc
tttagccaatcactgcgctcaaaaaattattcaatattCTTCCCAAATCT
GGAAGGAGGTCAAAGCGATTCACCAACCCGGACAGATCTGGACAGATTCT
GTTACGGACGGACTCAGTCCATTtttagagtgaatacgtgcCATGCGCGG
AGTAATCATAATCTGCTCGGAGGTTACCGATGAATATATTTTACCATCTA
TCTCCTCTTTTCAGACGATGGTATGTTTGAAGGAGACATGTTGTTGNAAT
CTAGTCGGAGGTTACCGATGAATATATTTTACCATCTATCTCCTCTTTTC
AGACGATGGTATGTTTGAAGGAGACATGTTGTTGACACCTGATCAACAGA
TGGCTGTTCAAAATGGATTCACTAGCATCAAGAAAAATTTCTGGCCAAGA
ACCATTTATTATGACTAGGAACCTACGCTAGGTGAGACGAATCTACCCTG
TATTTGAAAAAATGACTTTATACACAAATTTCCTTTTAGTatattcatgt
aaaaaagtcacaaaaacgtcgagtaaagctctgattggctgaatatTGCA
CACATaagcatatatttttttcaaaatgtcaagaGTATGAAGTAATCTTT
GCAtgtctcagccaatcagagcttttcgacgttttttcttgaacttgtta
catgaatctgctaataagAAAATCATGTATTGTATATAATGATTGATTGA
CTCCTACTTGATCCAAAGATTCAAAAGTGACAAGATATGTGATATTTTAT
CGATACGCAAAGCATGGCAATGGCTaggcaattttttaaatttaagggGC
TGAAAGAGCTTTTCTGGGACCCGTTTTGagtcaattcaaaaaaatcccTG
GGAAAACGACTTAAATGTAGCTTTCCTTGGCAAAATATTGAGGGGGTCAT
GATAAAGTAACGGGGCCATCGCATGGTAAAGTAACGGGGCTATGGTATCT
AATccaaaacaatgaaattcaaacagaaaatgaaTATCTTGAGAAACTTA
TGATGAGAACAGTCAATGACTTTTGAGGTACTCGCTTTTGGATTTTCgta
ttaatttcaaattttcagaaaccTCCTTTAGAGTTCCAGTTTTTTTAGGG
GAGGCCCCGGATGAAAAATCTCCTGCCTCCTCAGCAGGAGGAGGGAGACT
TTCTTCTAGAAAAATCCAATAAGTGATCTTTAATTGATGATTgataatac
agttgacgctctctaattcgattttcgagGGGAATTTTGTTTTAATCGAA
TAATGGAGTTTATCGAATAtcagaacgtcgaattagagagcgtcaactgt
tattttttgttattttttcgcTCCAGCTAACGAGCGGAGTATTTTGGATG
CGATAGCCGATTATGAGAAGTACACATGTTTCAAATTCGTGAAAAGAACG
AACGAGAAAGATTACATCTATTTCTTCAAAGGGTCAGGGTAAGTGAAATT
ATACATGCTTTGAGTGGCTTTTTTACTACCAAAAAACCAACCAATTTAAG
AAATTACCATCATAAGGTATGGTCCTCTACTAAATACTATCCTCGGATAA
AAACATGCCATTTGGGGAAACAGTCGGGGAAATGTGACTAATAATTGAGC
GATTTTGTATTGCTTCtatgaaaagtttttgaacttgtttttaaaagttt
aaattaaaggttagaaaatttggaaaatcgaCTTTTAATTTCGAGTTGAT
TGAATTTGAACTAGCGAGCACCTTTATCATTTTGTTTCTTAGTGAgtgtg
acgtctagtataggctacatAAGAACAACTTGAAACTACCACATACATAT
ACAATTTTAAGGTAGAtgataagttttttttctctcgATTTTAGATGTTT
TTCTGGAGTTGGATACTTTCCAGGCTCAGGGAAACATTCAGTATCCATCG
GACCTGGGTGTTCATCCAAGGGTGTGGTCATTCATGAAATCGGACATCGA
ATCGGTAAGTTTTCCGAAAATAAATTCAATGGACGATCGCGGTTTGTATC
GAGTATCGAGACGTAAAAAACCTAAACGTAATTTTGGAAAGTAGGTCTAC
TGTTGAAGACAGAAAATTGGGTTGATTTTGTTACCggaaatttttgatga
aaaactgGATAAACTAATTTTCGGTGGTGAATTTTTCATTCAAGTTTCGA
CGCTGTGACGAAAATAGCTGAAAAGATTGAAGGAATTGCGGAATTGGGTA
CCCCTGAAACACTCCCACTAAAACATAAAGcgttttattttcatatttat
ctCTTTCAAAAGGAATCTACCACGAACAAGGGAGAGTTGACAGAGATAAA
TACATCAACATCCATTATGAGAACATTGTTGAAAGTAAGTATGTGATTGG
CTGATCAAACCAAATACTTGAAATCTATTGACTGATCAAATGAAATTTAT
TGgcttaaacttaaaaaaaaagactcAAACATAAAAGAAACTGTCCGAAA
TAGCTTTTCCCCTCAGTTTTAACTTAGGGGCTGTTCATATGGAGGCGGGC
TGGCCCGGCTTGGTAAGGTGGGATGGATTTTCGAACGTCACGTGATCTAT
TTTTAGCTATTTGATTCGTCAAAATCTGTGATATAACGTTCGAAAATCAA
TACCACCTCGCTTCCATATAAACAGCCCCTTAGAGTACAGAGCATTATCA
AAGTTTAACGGAAAGGTTTCGAAGCGAATTTTAACTTTAAGGAAACCATT
AATTAACAcatctcctaccatttgcttacacagcatttttaagcaaaaga
agaaaaaacaattttctccTCTTTTGGCGCCGCTCgagcacaaattttga
aaaattcttctgtttattttgctttgtcagcatGGAGGCGCGCCTCCTTT
ctttatcataaaaaaagaatatcttttaaataattatttttatcatttcc
aGAATACAAATACGCTTTCCGAAAATTCTCATCATCACAAGTGACGTCAC
ACGGCACAATTTATGATTTCANCTTTCCGAAAATTCTCATCATCACAAGT
GACGTCACACGGTACAATTTATGATTTCAGAAGCGTGATGCATTATGGGT
CGAAAGCCTTCTCAAAGAATGGGAAACAAACCATCACGACCAAAGACCCA
AAATATCAACACCAGATTGGTAATCGACAAGGGTTCAGTGAACTTGATAA
AATACAAATCAATCGAATGTATAAATGCTCAGGTAAAATGATCTTTAAAA
TACCTACAATCTACAATCTTCAAAGCAAAACAAAGTCCGGTATCTGTAGG
CGCGCTGCTATCACTTCTTTCAACTTCAATCGTTTTGCTTGACACTTCTA
CCTGACTGACCTGTAATCAAAGCCCTGGACTTAGCTATATCCGCCAAGTT
TGATATTAGTTATTAGAAAATCTCTTCCTAATGATAGCATAATTCTATGC
AGAGTCTATTAACGAGTTAATACAATTTTCCGTTTAAAATTTCTTGTCCC
TCATCGAATAGTGATACGATAAGGGTGCCAAGCCGTATCATTATTCGATG
AGGGTCAAGAAATTTTATACATTGACCCACATCGACCAATGAAATTTCCA
GGCTGGTGAGTGATCCACATGGAGAGTTGCTTGAAAGTCTTATAACTGTG
ACAAGGGCTACAAAGTGTAAAACAATATAAACATATCTGACTATTTCATT
ATATCattgatttttccaaaaacgtccgttcaaagattttggttggcTGT
AATATAGTAACTATCTGGTGGTGGTTCTACAAGATCTGCCCCCTATCTAT
TTAGAAGCCCCGCCAACAAACACACCAAAACCAGCAACTGTTCCCACTCA
AGCACCCAGTGGACCCAAAGTGGTTTTGAAGCATGGTCACTGGAGAAGTC
TTTCATTGAACAATGCAGGAGAGCTTATCTTCACCACCCGCTGTAAACAC
GCTTTCGAGAAAATCGATGGAGGACATTTTCGTGTACATGGTACATGGAG
ATGTATCGAGCCCGGAAGAAATGATGTTTTGATGGCAGGTAGGTCAATTT
AGGTCATATTTTGATACTTTGATATGATATTTTGTCAATTACCTATTagg
tatttaaaaatacaacCTAACGTAGATATCTTTCAAGTTGAACAGTTTCG
AATCGAAATAGAAGCAAACGAGGAACCCCATAAACAAATCATTCTTGGTC
GTTTacgcctttttttataagaacatccaaaattttgaagcctttggatg
ttgagttttaagcctaaaaatgttcttaacatgttcttattttcaccatt
ttttgagcatttgtGCCCATTTTTTCTAAGNaaatgttcttaacatattc
ttattttcaccattttttgagcatttctgcccattttttctaaaaaaccg
GCTGGTTTAGAGTcgtcaaagccttaaaatgttcttaacttgttcttaac
atttcggccatCAAAGccgtttgttcttataaaaacgtgtatcaaaTTAA
AACTAGGTACCCCTTAATTGATATAAGATGTAATCAAATGATATGATTAG
GGGTCCCATAAACAAATATTGACCGTTTTATCAAATTTAAACTAAGGTAC
CCCTccatttttaggaattttaatCTTTAAAAGTTAATTTTCAACTCACA
ATCTAATAGGTAACAAGTGTGTATCGAATTACGAAAGGACGGACATCCAA
CCAGACGGTTCTTTCTCCATCCTTCACAAACCTTCTGGCAAATGTATCCA
TCCCAAAGGTGGAAGCTCGTACCCCCGTGACGGCACTGTAGCGCTGATTT
ATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAATATAA
cacatttttgtttgtttgtagcattttttttcatagaactGNTAGCGCTG
ATTTATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAAT
ATAAcacatttttgtttgtttgtagcatttttttcattgaaCTATTCATC
TAGAATATAAACTTTAGTCTTTAAAACGACTGGAAAAGAAAAGATATTCG
AATGACAATCGTTGTCGAAAAAACATTCAAATGACAAAACAGTGGCCTGT
CCACCGGTGTTTAGCCATccttacaaaaatattttatcaaaacacaTCCT
ACGAAAGGAAATTGATTTGAAGATTTTAATAAaaccttcttcttctcctt
ctgATATTTTAGCATTACTAGGGCAAACGTTTTTGTCGCCAAATTTACCA
GGAAGTTCCTTTTCCGAATCTAGACAGGCTATTTTTGATAACCTCTCCAA
AAGAACATGGATTTTAACAAATGTGTATACAGTGTAGACAACTGTCGGAC
CCATAATCATCAATATTGGTAACTCATAGCAACTAGTAGTAAACACTaat
tatttttctcacaaaaatGGCTGCTCCCTATTATTTGCACACAAGTCGTT
ACAAAATAATGAGACAGGATAATTACAAAACCATTGAGCTCGCCGATTTG
CTTTATTTCTCGAAAATATTAACACAATGAAAGTCATCAACTATATACTA
ACTTGTGAAGTCAAATGAGAAAGTGAAACGTATCAAAAAAATCtccgaaa
atttatttgaaaaacaGATGTAGAACAAATGCTTTGGAAAGGGAGTACAG
TGCGGAACGAAAATTTcgcaagaaaaaataaaatccacAATATGGAATCG
AAGGAGATCTACCAATACAAGGATATTGTACTACGGGAAAAGCCGTTAAC
AGCTTTCAAACCGAACTTAAAAATCGTACAAAATATACGGCGAATCGAAA
ATGAGTTACGACGTCAACAAACCCAATACGACGATAAAACACAATGGATA
CGTAACGTCGTTCAATTACGAACTCATCAACGACAACGTATCCGAAATTT
AACAAACAACTACCGGCATCATACAAAAACCGATTTTACACCGATCAGGA
AAAAACACGACAACGACGTCTATTGTCGGATCTTAGGACAGGCATATTGC
CGAGAATGTAATCTAAAAGTCAAAATTGAAGAACGTAAACAACAGACCAA
GAATTTTCTCGAAAACAACATCGAAACAGCAGATAAACCTTTGACGTCAA
AAGAAAAAGCCGTCTTGGCGATTCTACCGACGACGACCGTCGATAAACAA
CCGGGTTTAGAATATACTCAAAAATACAATGAAGATTTGAACCAATACAG
ACTTATTCCTTTGCTGAGTTCTGACGAGCCGTTGAAAAAGACGTTTAAAA
AGGCGGCACACACTGTTCAAAATGGTCGTATCATTAACATTGTGAAGAAA
ACTGacagtgaaaaaaaatcagaaaaatcaaaatccgAAACAACAACGAA
TAACAATAAAGATACCAAAAATTTAGTGAAAGAAACTGCAACTCCGCCAA
ATTCACTTCAAACGCCACCACCCACAAGGGCAACATCCACCATAAGCCAA
CAAGAAAAACCGCCCATAAGATCAGGAGATTCTTCTTCGTTTAAACCGCG
TACAGACTTAGAATGGTTCCATGATATTTCGAAAAGACGTAAGAGCAACG
TCGTACAAGATCGCAGACTTCCAGATTATTTCGATGTCATTCAACTAGCT
GAGAAACTATCCTCTCTATTTCGCGAACGCCATTTACCGCCTGAGCGGAG
CTTCAGTCGAATAAGCAATGTTTCATCAGTTGACCTCGATCCAAATGATT
TGGGAAGAATCCCAATGGATAGAGGTACATTAAAATCACGTGCAGTTACA
AGACAATCTTCAGCTATTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAG
TAGCATGAATCAAACATCAAATATTCCTTTTGACGGAGAGCAAGTTAACT
CTGAACTCAAAGCAGAGACAAATGGAGATTCTGGGACACAAGGCGTTGAT
TGCAACAGCCGGAACGAGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAA
TTATTCGGATAGTCATATTGGAGACAATTTACGAGACGAACTTGAGGATA
TTAGATCACTTCTGAATCTTGGTGGAGGAGACAGTGATGTCGAGGATGAG
AGAGATGTTGGTCGAAAATTTTCAGACGATGAGTTTTCATCAGATGAGGA
TGAAAATTATGGAGGAAGGTTGCTTCCGATCATCCCACCCACTGTCAATA
TGACTGCGTTTAGAAACATTTATAAAGAATATAACGATTATTAGACAATT
GAAGGAAATATATACTTTGTAAATCTCTTATCTTACCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045177XLOC_045177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072770-exon-scaffold_84-1491911889:169188..169326TCONS_00072770-exon-scaffold_84-1491911889:169188..169326Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:169188..169326TCONS_00072770-exon-scaffold_84-1510915933:169188..169326Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:169188..169326TCONS_00072770-exon-scaffold_84-1575043694:169188..169326Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:169840..169968TCONS_00072770-exon-scaffold_84-1491911889:169840..169968Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:169840..169968TCONS_00072770-exon-scaffold_84-1510915933:169840..169968Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:169840..169968TCONS_00072770-exon-scaffold_84-1575043694:169840..169968Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:170864..170975TCONS_00072770-exon-scaffold_84-1491911889:170864..170975Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:170864..170975TCONS_00072770-exon-scaffold_84-1510915933:170864..170975Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:170864..170975TCONS_00072770-exon-scaffold_84-1575043694:170864..170975Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:171382..171491TCONS_00072770-exon-scaffold_84-1491911889:171382..171491Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:171382..171491TCONS_00072770-exon-scaffold_84-1510915933:171382..171491Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:171382..171491TCONS_00072770-exon-scaffold_84-1575043694:171382..171491Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:171800..171871TCONS_00072770-exon-scaffold_84-1491911889:171800..171871Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:171800..171871TCONS_00072770-exon-scaffold_84-1510915933:171800..171871Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:171800..171871TCONS_00072770-exon-scaffold_84-1575043694:171800..171871Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:172440..172719TCONS_00072770-exon-scaffold_84-1491911889:172440..172719Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:172440..172719TCONS_00072770-exon-scaffold_84-1510915933:172440..172719Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:172440..172719TCONS_00072770-exon-scaffold_84-1575043694:172440..172719Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1491911889:173292..176726TCONS_00072770-exon-scaffold_84-1491911889:173292..176726Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1510915933:173292..176726TCONS_00072770-exon-scaffold_84-1510915933:173292..176726Clytia hemisphaericaexon
TCONS_00072770-exon-scaffold_84-1575043694:173292..176726TCONS_00072770-exon-scaffold_84-1575043694:173292..176726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:169188..176726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0268883	0	0.0456093	0.0865034	0.0726162	0.0567645	0.0691453	0.0688215	0.090731	0.17098	0.084197	0.0543384	0.264802	0.500853	0.478899	0.461392	0.041749	0.183283	0.471708	0.484225	0.682476	0.864322	0.140191	0.458044	0.475458	0.511835	0.234037	0.238207	0.0391202	0.0346278
Blast
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BLAST of TCONS_00072770 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.913e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  124 VKQMENDGMFEGDMLLTPDQQMAVQNGF--------TSIKKNFWPRTI--YYD*EPTLANERSIL-DAIADYEKYTCFKFVKRTNEKDYIYF-FKGSGCFSGVGYFPGSGKHSVSIGPGCSSKGVVIHEIGHRIGIYHEQGRVDRDKYINIHYENIVEKYKYAFRKFSSSQVTSHGTIYDF 630
             K+   DG     +L +P    A    F        TS  +  WP  +  Y        ++R+I   A+  +EK+TC  F++RT+E+ +I F ++  GC S VG   G G  ++SIG  C   G+V HE+GH +G +HE  R DRD+++ I  ENI    +Y F K  + +V+S G  YDF
Sbjct:  116 TKEAGKDGRENTTLLHSPGTLHAAAKTFSPRVRRATTSRTERIWPGGVIPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRR-GGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDF 295
The following BLAST results are available for this feature:
BLAST of TCONS_00072770 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL29.913e-2134.25Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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