Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072773 ID=TCONS_00072773|Name=TCONS_00072773|organism=Clytia hemisphaerica|type=transcript|length=3656bpRun BLAST on NCBI transcript from alignment at scaffold_84:169188..176726+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00072773 ID=TCONS_00072773|Name=TCONS_00072773|organism=Clytia hemisphaerica|type=transcript|length=7539bp|location=Sequence derived from alignment at scaffold_84:169188..176726+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00072773 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.865e-21 Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 124 VKQMENDGMFEGDMLLTPDQQMAVQNGF--------TSIKKNFWPRTI--YYD*EPTLANERSIL-DAIADYEKYTCFKFVKRTNEKDYIYF-FKGSGCFSGVGYFPGSGKHSVSIGPGCSSKGVVIHEIGHRIGIYHEQGRVDRDKYINIHYENIVEKYKYAFRKFSSSQVTSHGTIYDF 630 K+ DG +L +P A F TS + WP + Y ++R+I A+ +EK+TC F++RT+E+ +I F ++ GC S VG G G ++SIG C G+V HE+GH +G +HE R DRD+++ I ENI +Y F K + +V+S G YDF Sbjct: 116 TKEAGKDGRENTTLLHSPGTLHAAAKTFSPRVRRATTSRTERIWPGGVIPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRR-GGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDF 295 The following BLAST results are available for this feature:
BLAST of TCONS_00072773 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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