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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072986 ID=TCONS_00072986|Name=TCONS_00072986|organism=Clytia hemisphaerica|type=transcript|length=295bp
CAATGACACACTTGATCTTTCAAGAAGAGAAGACCTCTCAGTTTCATTCT
CAGGTCAGAGACTCCAAAACACAAACAGCTGTAAATACCTTGGAGTCCTC
ATTGATGACAAACTCAATTGGAAACAGCAAGTCAACATGGTAGGCACCAA
AATCAAACGAGGAGTAGGTATGATACATAAAATAGGTAGGTTTCTTGCAA
AGAGAAACCTGATATCGTTGTATTACTCACTCATTCAATCCCACCTAACA
TATTGTATTACATCATGGGGTGGTCCTGAGACTGCTGGGCTAAAT Run BLAST on NCBI transcript from alignment at scaffold_86:125955..127573- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072986 ID=TCONS_00072986|Name=TCONS_00072986|organism=Clytia hemisphaerica|type=transcript|length=1619bp|location=Sequence derived from alignment at scaffold_86:125955..127573- (Clytia hemisphaerica)
CAATGACACACTTGATCTTTCAAGAAGAGAAGACCTCTCAGTTTCATTCT
CAGGTAAGAATTGTGAATTCGAATCCTTATTCTTGGATATAAACCTAGGG
TCTGAGCATATCCTTGTTGGGGTTGTCTACAGACACCCTAGTGGTTGTGT
TAAGGAATTCAATCAAATTTTTGACACAAAAATCTTTAAAAAAATTCGAG
ATACAAGGAAAAAATCATTATTATGGGAGATTTCAATATAAACTTAATTA
ACAGCAATTCTCATCGAAACACTGAAATTTTTCTAGATAATATGTTACTG
AACTCAATGCTTCCTTATATAACTCAACNCCACAATGGCTTAAATATTTT
ATTTGAAATGCATGCTCCTCACAGGCTTACCACAAAAAAAGAACTGAGGA
AAACAGATAAACCTTGGATGACTGAAAAAATGATTAAAAAAATAAAATAC
AAAGATTTTGTATATGGCCAACATATGAGAACAAAGTGCTTAGAATTAGA
AAAAGAATACCTCATTGCAAAAAAAAGATATTACATGCGAAACAAATAAA
TTAAAATTTAATCACCTAAAAACAAAATTTTCAAACTGTAGTAAGAATAT
CAAAAAATTTTGGAAAAACATAAATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAGCAGGCT
CGTTAAAAGATCTCTTAAAAAGAAAGAATATGGGTGTGCCATCTTTCTTG
ACTTGGCTAAAGCCTTTGATACTGTGAACCACACCATTCTTCTCCAAAAA
CTCGACAACCTTGGAGTTAGAGGCCCCACTCTCAGTTGGTTTAAAAGCTA
TCTAACAAACCGTTTACAATCTGTTATAATAGACCAAGTCAAATCAGATC
CTCTTGAAATGTCACATGGAGTGCCACAAGGATCCGTACTTGGTCCTCTG
CTCTTTCTGATTTACATCTTTATCTAGTATCCTTTTTGCAGATGACACTT
GTCTTTTCCTTAGTGACAAAGATCCTAATCAACTTAAAAACTCTCTCAAT
CAAGAATTAGATAAGATCTCTAATTGGCTCACAACCAACAAACTTACTCT
TAATGTCTCCAAATCAAACTTCATCCTGTTCTATGGCAAACATAACAAAA
TTAAAGACTTTAACTTGACTATTTCAGGTCAGAGACTCCAAAACACAAAC
AGCTGTAAATACCTTGGAGTCCTCATTGATGACAAACTCAATTGGAAACA
GCAAGTCAACATGGTAGGCACCAAAATCAAACGAGGAGTAGGTATGATAC
ATAAAATAGGTAGGTTTCTTGCAAAGAGAAACCTGATATCGTTGTATTAC
TCACTCATTCAATCCCACCTAACATATTGTATTACATCATGGGGTGGTCC
TGAGACTGCTGGGCTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072986-exon-scaffold_86-1575043694:127521..127573 | TCONS_00072986-exon-scaffold_86-1575043694:127521..127573 | Clytia hemisphaerica | exon |
| TCONS_00072986-exon-scaffold_86-1575043694:125955..126196 | TCONS_00072986-exon-scaffold_86-1575043694:125955..126196 | Clytia hemisphaerica | exon |
| TCONS_00072986-exon-scaffold_86-1510915933:127521..127573 | TCONS_00072986-exon-scaffold_86-1510915933:127521..127573 | Clytia hemisphaerica | exon |
| TCONS_00072986-exon-scaffold_86-1510915933:125955..126196 | TCONS_00072986-exon-scaffold_86-1510915933:125955..126196 | Clytia hemisphaerica | exon |
| TCONS_00072986-exon-scaffold_86-1491911889:127521..127573 | TCONS_00072986-exon-scaffold_86-1491911889:127521..127573 | Clytia hemisphaerica | exon |
| TCONS_00072986-exon-scaffold_86-1491911889:125955..126196 | TCONS_00072986-exon-scaffold_86-1491911889:125955..126196 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:125955..127573 - |
Blast
The following BLAST results are available for this feature:
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