TCONS_00073006 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00073006
Unique Name	TCONS_00073006
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2565

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_86:647127..661679-
coding sequence from alignment at scaffold_86:647127..661679-

transcript sequence

>TCONS_00073006 ID=TCONS_00073006|Name=TCONS_00073006|organism=Clytia hemisphaerica|type=transcript|length=2565bp
ATCATTGACAAGAAATTGTTGGTATTTTAGTCCGCAAATTATACTTCTAC
ATGTGAGCTTCGGATTccattcaagatggcggacaaAGCAGAAGAAAAAA
TGCCAGAATCCAAAAAATTGAAGTGCATTATCGCCGATTCAGcagcattt
ttgaaaaatgttgaccTTCAAAATCTTTCAGAACGCATTTTCACCATCAA
CGAAGTAATAAGGGAGATCCGAGACTCAGCCACAAGGAAACGATTGGCTG
TTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTCCACAGAATCACTAAGT
GCAGTGACTGAATTCTCCAAAAAGACTGGTGATTATAAAAGTCTGTCAGC
TGTTGATATTCGTGTATTGGCATTGACATATCAATTAGAGAAAGAGTTTG
GATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAACGACTCAAATAGTG
CAACATTCCAAGGTCAAGTCAGATAAACGTTTGGCGGGATTTTATTCTGA
ACCAAAAGAGTCTTCGTTGGATGCTCAAGATGACAATGGCACAACGACAG
GAGAGGAAGATACAAAAATGGAGTCCTCTTCAGATAAGTCTGAAGAAAAC
GAAAACAATAACAATATATCGACAGAAGAAGATGAAAGAGATGAATTAGA
AGAAAtggatgaagaagAAATGAACGAAGAAGGGacggaagaaaatgaag
acgatGGTGGGGGTTGGATTACACCAGGGAATATCAAAAAAGTCAAACGA
GAAATGGGTTGCAATGATGAAATTGATATGGAAAACTCAGACATTAAATG
TGCATGTCTAACTACAGATTTTGCGATGCAGaATGTTCTCATACAAATGG
GTTTGCATGTAATGTCTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAAT
TATATCCAAAAATGCTTTGGTTGTAATAAAGAAACACACGATATGGAGAA
GATATTTTGTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGTGA
CTATCGGTGAAGATGGAgtcattcaatatcatttaCCAAAACGGAAAAAG
AATCACAACCTTCGAGGAACTAAAttttcgATGCCATTACCCAAAGGTGG
CCGACACAGTGACCAACCGTATCTCTTAACAGAAGACCAGCATTTCTCGA
AAGACCGTATGCCGCAAAATCGCGATAAAGTAAATCCAATGGATCCGGAT
TACGTATCGCGAGTAAACCCGTTTACACAAAACGACGTTAACAGTCGAGC
TTTTCATTTGAACCTTCACGTAAAAAATAAACAACCACGTAACCCAAATG
AAACACGTAAGAAAAAGTCTGGACGTAAGAAGTAGGTGTTATTATTTCAT
GCATAATGATTGTCACTTATTTTctacaaacaatttttttatataaaata
attTNCAAAAATAAACAACCACGTAACCCGAATGAAACACGTAAGAAAAA
GTCTGGACGTAAGAAGTAGGTGTTATTATTTCATGCATAATGATTGTCAC
TTATTTTctacaaacaatttttttatataaaataatttcaatgagaTAAT
GGTTACAAATATTaatcacaaaagaaaatatatcaatttcctgtttttca
attttctggTTTCTCCTCGTTCTACTGAGTACCTTAATTAAGGGAAGACA
TTTTTGGGGGAATTCAATTTAgtgcaggaatttaatttgatggATTCTGG
CAAATTTTCTTTCCCTCTAGATTTCTCCACTTAAGGTAACTAAACacttt
ttgacttaaaaataaagttttttaaaaattgtagTAAATCAAATATGTTA
TAATGTcaaagtaataataataataacaaatattttacgTGGCATGCTTC
GAAAAATTCAACAGCTTTTAGACAGCTGAtgaattgtttccacgaagggc
cacAAAAAAGTGGAACGAATTTTGACAAAGTTGGGCTCTGAATTTTAAAC
AACAAAACCCTGTTTAGAGATGCACTTGTCTCTTTTTGTGAATTTCGAAG
CACTCAATGTGAAATGATTCTCCTTATCAACTCGTCCATCACCTCTTATA
AGAACTTGGATGGCGCCATCTTGAGAAGGGTCTTTCAAGTGCACGGTAAC
GAAATTGACAACTGCTCCACTGGTATCGTAGTATGGTGCTTTTTCGGTTG
ACGTACAATTTGTTTCGTGTGTACATGCATAAGTTGCGAATCCTGAAAAT
TCATCTGTTCCCAATACTGAGATGACTACGTCTCCAGGGAACTGTTAACg
tagaaatgtaaacattttaATTACAATTTGTAGGTGTCCTTCTCTTACGA
CATTGAGCACTTCTCGATACATATGTCTTTTTCATAAATCTTTTTCTATA
CTTTTTTTTAGGTTATGATCTTATAACATGCACTaagttataaaatttat
ttgtttattcGTCCTTTAGACTTACCTTAGCCGTGTTGAAGCAATAACCC
AATTCAAAGCCTACAACATCAGCTGTTTGAACGACTTCGTctgcagtagt
tttgaaaatggTAACCATATCTTGTGTTGTCTCTGCACCTGTAATTAACA
AGTGTTTAAGCTATG

Run BLAST on NCBI

protein sequence of TCONS_00073006-protein

>TCONS_00073006-protein ID=TCONS_00073006-protein|Name=TCONS_00073006-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MADKAEEKMPESKKLKCIIADSAAFLKNVDLQNLSERIFTINEVIREIRD
SATRKRLAVLPYEIEFREPSTESLSAVTEFSKKTGDYKSLSAVDIRVLAL
TYQLEKEFGSPENIKLEPKKTTQIVQHSKVKSDKRLAGFYSEPKESSLDA
QDDNGTTTGEEDTKMESSSDKSEENENNNNISTEEDERDELEEMDEEEMN
EEGTEENEDDGGGWITPGNIKKVKREMGCNDEIDMENSDIKCACLTTDFA
MQNVLIQMGLHVMSVQGRLIRQARNYIQKCFGCNKETHDMEKIFCPSCGN
KTLMKISVTIGEDGVIQYHLPKRKKNHNLRGTKFSMPLPKGGRHSDQPYL
LTEDQHFSKDRMPQNRDKVNPMDPDYVSRVNPFTQNDVNSRAFHLNLHVK
NKQPRNPNETRKKKSGRKK

Run BLAST on NCBI

transcript from alignment at scaffold_86:647127..661679-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00073006 ID=TCONS_00073006|Name=TCONS_00073006|organism=Clytia hemisphaerica|type=transcript|length=14553bp|location=Sequence derived from alignment at scaffold_86:647127..661679- (Clytia hemisphaerica)
ATCATTGACAAGAAATTGTTGGTATTTTAGTCCGCAAATTATACTTCTAC
ATGTGAGCTTCGGATTCCATTCAAGATGGCGGACAAAGCAGAAGAAAAAA
TGCCAGAATCCAAAAAATTGAAGTGCATTATCGCCGATTCAGCAGCATTT
TTGAAAAATGTTGACCTTCAAAATCTTTCAGAACGCATTTTCACCATCAA
CGAAGTAATAAGGGAGATCCGAGACTCAGCCACAAGGAAACGATTGGCTG
TTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTCCACAGAATCACTAAGT
GCAGGTAATTTTATCTTTCAGCAGAGTGGTATGGTAGAATAATATTTTTG
GGTGGCTGAGGATCAAAGTTGCCATGCCTTTCATAGATTCAAAGGAAAGT
CAGGAAGCAAAGATACTCACTACTGCAGATTCTCAGACAGCAACACGACC
CTCGATCGACATGGCCCGAGAATTCTCGGGCCTGTTCGGGCCATGTTCGG
GCCGAGAGACCCTATCAATTCTTTTGGCCCGAACATGACCCGAATCATTC
GGGCCATATTCGGGCCATGTCAGGAGATTCCATATTTAAATTGATTCCAT
ATTTAAATTGATTCAGCATGTTTGTTTAGTCAAACAAAATAGTACAAAAT
AAGATTTGTCTGTTTTGTTTATATCGCTCAAAAAAACTTTACGAGCTTCC
CGTGGACACAATGAAGTATAAGCCCGAAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAAGGTTAGAGATTGAAC
TCTAGCCATTCGGGCTTTAACTCAATGCATGGACACGCTTCAGTTTAAAA
CCAGGACCAGTTTAATAGCCAATATTTCCACCCTAAGTATATTTATAACT
ATGTTTTCATACCAAATAAGACATTTAATATTTATATGAATTTACAACAT
TCATATATTTAAAATATAATTAAGAGAAACCAAGTTTTTCTCAAAGAAAA
TGTTAAAAAAATGTCCTGAAATTACACGCCTGTTTAATTCATGTTTTCAA
AAATTGGCCCGTGCGTGGCCCGTGCGTGGCCCGAACACGGCCCGAATTCT
AGGGGCCAGCTCGGGCCATACTCGGGCTTTACGCGAATTCCAATAAAAGT
TTTGGCCCGAGAATTCTCGGGCCATGTCGAGGGTCGTAGACAGCACTTAC
TGGACTAATAGAACTGAACTAGACGGTTCCCGTCGTTGCAAACGCCGATT
TAGCTTGCGCATCAAAAGCCCTTGGGATGATAAAGATGGTATTGATGATG
CTCTCTAACTTTATTGGACCTACCTGGAGGTCCTATAAATTAACCTGTGT
TCGTCCGTCCAGGAAATTTTGGTTGTTTGGCGTGTTTTTATGAAAAAACT
GACCAAATTTTATATTTTTTTATAAGCACATTATCAATTACTTAGGTATT
AGCTTTTCTCTCAAGTGAGTTACGGCATGTCCAAAGAAAAAGTGAACCAG
TTCCACTCACTTTCAAAATGTCAAACATAGCTGGAAAGAAGCGCCTTGTG
ATGTAGATCAANAGTGAACCAGTTCCACTCACTTTCAAAATGTCAAACAT
AGCTGGAAAGAAGCGCCTTGTGATGTACATCAACGTGATAGGTGTTAGAA
AAATTTAACTTGAGGCTAAATGAAGTTATAGCCCAAAAACCTGTGTTATG
ACGTCATAAACGTTAGATAACATTACGTCATAAAACTAAAAATTTGAATA
TCTCGTGAACTAATAGTCATATAAACGTCAAATTTTGACCACAAATAGAT
ATTGATGTAAGAAAATCTCTGAGTTAAAAATCTTTTGAAAAAAATGATGA
CGTCATTTTTTATAGCCAAAAATCGAAATTGGCTTAAAAATGCTGACGTC
ATCATTTTTCAGGAGATTTTGAAAATTTTTCTTATAGAGAATTACGATAT
ATTTGTTCTGTCAAAATTTCATATTGATATCATTAATAGTTTATGAGTTA
TTTAAATTTTAAGTTTCGTGACGTAATGTTACGTAATGNNGAGATTGGCT
CTTTCATTCTTTATGATTTTTTGCACAAAGATGCATAACTATAAACCCTA
GCAGTTATATCAATATGCCTTCCCTGTCTTTAAAAATATAAATAAAAGTA
ATCACGGAAAAGGACGCAAAAAAAAAAGACATAAGTGTGAGAACAGAGTA
ATCAAACTCGTTAGAAAAAGTACCATTATAAGTCATAAAAAATCAACCTG
AATAAATGCAATCGAAATTCCAGAGAACTTCATAATTCTCCAAACAACAT
TACATTACTATGTCAAACCCCCATCACATAACCAGACGGTGTCAATCGAA
CGAATCGAACGCCGAATCAATTGAACGCAATTGAACGCAATCGAATAATT
GCAATTCGATTGTCGAACGCAATCGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCGATTACGT
TCGATTGTATTCGATTACGTTCGATTGTATTCGATTACGTTCGATTGATT
CAATTATATTAGATTTTATTCGCTTTGCTACGGTACTTAGGCACTCGGCC
ACCCGCTAAAAAGCCCTAACGGAGTGATCTAATTTAATTCAATCATACTC
ATCAAACATAATCCTCTAATCGAACGAAATCGAAGATTATTCGAATGCAA
ATGACAATTGAACACAGTTCAACTATCAATTGAACCAATCTAACCTTACT
CAAACGCAATCGAACACAATCGAATATTACCCAGGAATCAGCCGTTCGAT
TGAGATTCGATTACGTTCGACAATCGAATCGCAATTATTCGATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATCGAATCGCAATTATTCG
ATCGCGTTCGATTACGTTCGATTGGTTCGATTGCGATTTTTGTTCGAAGT
TGTTCGATTGACACCGTCTGGACATAAATTTTACAATTACGTCAGAGTAG
ACTACGCTCGCCACCGAAGAGGTTTATTTGGAAGGGTGCATGTCACTAGT
CCGACACTTTCTAGTCTGACAGTAAAATAGTCCGAATCTATAAAATAAAT
TTACAATTTAGAAGTCTTTTTTTCCGACGTCACTTTTGTCCGAAAACGAA
AGATTTTAGAGTGTCAAATGTTGAATAAGGGTTTTTCACTGAGATAATAT
TAATAAAAGTTCATTTTGGCGGCATTTTGACATAATTAGAAATAAAGGAC
CAATCAAATTTGCGTAAAGATGATTTATAGCAAAAAGAATGGGTTTAAAA
GGGTCCCTTTTTGCATGTTCAGAATTATGCTATAAGGGTTGTAATGTAAA
TCACAAACTTATTTAATTCCAGCCCCCCTCCCAAAGAAGGGTCGTAAAAA
CAGCTAAATCCAATTTCTTGACTCTTGAAAGCCTAATAAGCTTCCCAAAA
TTTAAGAAAAGTTGGGTTTAGGGGCCGAACCTTAAAGTCAGAACTTTGGA
TTTTTAGAAGCACGCTGTTGCTTATAAAAGATGTGCCTCCTTTTCGGCGA
TTCATATTTCGTTTTATATGTTTTTTTTTGACTCGTTGTCAGACAAAATT
GTTGTCGGAATACTGACGCATTCGTCAAATCCAACGTCGGGCATTTTTAC
TGTCGGAATAGAAAGTTTCGGACTACTGACGACCTCCCATTTGGAAAGGG
TAATTATATTTTATTGTTCGCTTCTTTTTTAAAGATTTGCCGGGTTGGAA
AAGTATGAATTTCTTTGTACATATTTTACCTACCCCAAATATTTAGGAGG
CTGAGTTTTAAACGAATCGTCAAGTTGAAACGGACGATAAATGTATCAAG
GTCTGTTTTATTTACCCCCTGGTGACTTAACAAAAGAGACTTAACTCGAT
GTCACAATCCAATTATTGAAAGTTTGTCTCGGCCTTTTTATAATGAGCGA
GACATACGTTCTCTGATTACTCAATTTTCATATTGACATTTTTGAGGCAT
TTTGATGTAACTACCTAGAATGTGACAGAGCCCGATTTTTGAAAAAAAAT
GTTTTTTGGGCAAATTTGGGCAAAAAAACAGCTGAAAAAACAGGTTTTTT
GGACTTTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAG
TATGCTAACATCATTGGTAAAAAATGGCTCAAGCAGATTTTTGCAAAAAA
AATTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAAT
AAGCATACATCAATGTTCTTAGTCAAATTACTCAATATTTTATGAGATAG
ATGTTTTTTTTTGCTCATGAGGGTTTACTTTTGAAGAATATGTGTGTTTA
GACATGAAATTTTGGTTGCTTGGCGTGTTTGTCTAGAAAAATTGGCCAAA
TTTGATATTTTTCTATAAGTACATTAGCAATTACTTAGGTATTAGCTTTT
CTCGAGATTGGCTCTTTCATTCTTTATGATTTTTTGCACAAAGATGCACA
TAACTATAAACCCTTGAATGTGACGGAGCTTGATTTTTGGAGAAAAAAAA
TTTTGCGTAAATTTCAGCTAAAAAACGGCTAAAAAAAGGGTTTTTTGGAC
TATGTGAAATATTGCATCATTGTATTTTTCTGATTTTTTGCATGAAAGTA
GGTAAAAGATGGCTCAGGCAGATTTTTGTAAAAAAAAGAATTTTTCAACT
CAAAAAACGCATCTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATA
TTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTCTTTTATAAGAAACAA
ACGACTAATTTTAATAGATCTTCACTATTTGTGTTCTGAATGATTGTTTA
CAGTCATGCTGACGTAGATATCAATTATATGTGTTAAATGCATAACCAGG
TAGGTCCATAAAAGTATCACTTGTTTTTAAGAGGAGTTTGAATTAGTTTT
CATCAACCACGGGAGTATATATATCGAGTAGTTGGAAGATTTCTCGTAAA
TACCTTTCTATGCTTCAAATTGAATGTGAGAATATGACTTGAAATCTTCA
CAATAAAATTAGCTTAGTACCGTGAGTGGTCCTAAATCCGACAGCCCTGC
CTATATAATAGACTATAATGTCGAGATGTCGTCAATTAATGTGATCAAAA
AAGTGTGAGTTGTAAAAATAATTACCTCTATTATTCTATTATTCTGAATC
TGTTGCTCGTGTTTAAAACATTAACAATTTTGTAATAAAAAAATTATGTT
TTGTATAAGAAGCAATTATTGTTATTTGGTTCAATTAGTTCAGTGTATCA
AATCTTACAAGCTTAGTTGACACTTTGGTATCTTCATTGCATCACAGTGA
AAGATTTGTTTTTATTTTATTTTTTATTTTTAAGACCCCATCGGATTTAG
GTAGGGCTGTCGGATTTAGGACCACTCACGGTAAACAGTAAACTGTCAAT
TATTAGAGTTTCTTCCAGAAGTTTGAAGGCAATTTCAATTTAATCGAAAA
CGGGAACTTATTAAGGGCTCTGACCATAGTTGAAAAATTGATTTAAGTAT
TTGAACATAAAAGTTATGTTTTAGGTTCTTTAACACTTTTGACTTTACAA
ATTGCTTTTTAATCAAATCCCTTCAGAGTAATTAAGAATTTAATTGCAAA
AATTATGTTATGAACTTTAAAAAGATGTTAATAATATGTTGCATCGCCTA
TAAAAAGCGCTAAGTTTTAATGGGTAATTTTAAGCGATATCAACAAGTGG
TGTTTGAAGTGGAGAATGAAGATCAACGTCAAAAAAACAATCCTACTACG
TATCTCCAAGGGCATACCCATTATTACCAACTACACAATAGACAATCAAC
CCATCACATCCAAACTGGAATGTAAATTTTTAGGTATGACCCTCAACTCC
ACTCTAAGCTTGAACTTTCATTTATCCAAGAAGATCGGTCAAGCTCATTC
CAAACTACATTATCTGATTAAGATGAATAACCTCAACTTTAGTATGAAGG
CTAAAAGAAAGGCATATATCCAACTTATCAGACCCATTCTAGAATATGGA
TCAGCTATGCTGTGCACTCTTTCAAAAGTCAACGAATCCAAACTTGAGAT
CTTCCAGAACAAATGTTTGAGATTAGTCACAAACTCCTCCAAGTACACTA
GAATCCAAACACTCCAGGACGAGAGCAACATTAAACCAATATGCAAAAGG
ATTAAAGATCTTGCCAAATCTTGGTTGACCCAAGCAAAGTCCAATGATAA
AAACAGTGTTTCTCTGATTCATGAAGTCTACTTCAACGGTTTTGACAATC
TACTAACTCCTCATGAGGTTATCTCTAACCATACCTAGATACTATGTCAC
AAAAACGTCATAGTATCTTTTTAACATTCGCTGATATCTTATGACACAAA
AAAATCTTCATTTCATGCACACTCACCACTTCTCTGTCTTCTCCCCTCTG
GGTTCACATCTCTGTCATAATATCATTTTAACTATTTTTAACACTCTATC
TCATATCTCGTACTATCCACATATACATAAACCCAATTAAATAAAAATAT
TGTAATCCTCTCTGAACGTACTTATCAAGTAATCACATTCATAACCACTA
CATACTCCTCTATCACAAAAAGACATACTCCATTGCTCACTAACATCTAT
AGATACTTTTCATTCACGTATTTGAGATACACACCTTTAATCAAGTATAT
AGTGGAAAAGGGCCTAGTCAGGTCAACCACTCAAAACACACAAATCAGAC
CTGATGGGTAATTAAGCTTTTTGTTTCAAAGTTTTTTCAAACTGTCTGCA
AAGAATTGAACTGTCTTAAATTTTTCAGAAAGAAAAATTTTCTAAATTTT
AATTATCAAAAGTTATGGATGTTTTTCTATGAAAAATTGGGATGGAAAAT
TGGTCAAAAAGCACTATTTTCAAGATTTTGAAGCAAATAAGCTTTTAGAA
AAATTTTCTGAAAAAATACCTTAAAGGAAGAAATTTTGGTGGGAATTTAA
TTTTGCGGGTGGCCGAAAAAGTTTTTTCAGAGGGAATTTAATTTGGCTGG
ATAAATTAAATTTGACGGGAATTTAATTTGGCGGTTTAGGATATTTTTGG
CCAAAAGTGTTATTTAAATAAGCAAAAAAATCTGTTTTAAGGCTTTAAAA
TAGGACAAATTTGAGGAATGCGTAAAATGAACTAAATTTGGTGGGAATTT
AATTTGGTGGATTTCGGCAAAATCCGCAAAACCCGCCAAATTTTCTTTCC
GCCAAAATTTCTTCCTTTAAGGTAGTTTTAGTTCGATAACAGATACACCA
TCTACTGCAAAAAAATTTTCAAAATGTTTTTTCTACGCCAAAACTAAGCT
CTTCAAAGTTGAAATACTCTTCTTCGCAAAAAGTCTTCATTTTCTTCTTC
ATCAAATTTTTTCATTGTGATTCTTAAATTTTCAGACTCACAGATAATTG
ACCTAAAAGAAAATGTATGACATGCCACAGTTTTAAGGGCGAAATGACGC
GTTTTAAAAGACCAAATAAAAAACACTTTGATTTCAAAACAATCATAAGC
ATATCCAAACTTACAGGACAACATTTTATATCCACTTCGCACGCGGAAGA
CCACCGTTTTTTACCTGTGCATTGACTATTTAAAAAATCAAATTTTACTA
TTTTTTTGTAGAAAGTGCCACGCCTTCTAAAATTCGAAACTTTATGTCAT
ATGATTTTTGAATAATTGAAATCAGCATTATTTTCGTTAAAAAGTAGGGG
CTTCTTCGTTCGATTCGAATGTCAAATCCTTTTTTGGACGGGGTTTTATC
GGAAGGTAGTGCTAATTTTTCGCACTCAATCATAGATGAAAATGAAATTT
TAAACACAAAATTAAAACCACAACGTATCATCAACTACTTTTTCGAAAGA
CAATAAGATTTTTTGTCTTTAAACTGCACGAAATCCCTCTTTCATACTGG
AAGCAACCCCCTGGCAAAATTTGAGAATAACAGCTCAGCTACCATCTTGC
GTTACACACATTTTTCATGAACTCATTTAGTATAGTAAGATAGTCATAGC
CAATTTCGAAAGACAATAAGATTTCTTGTCTTAAAACTGCACGAAATCCC
TCTTTCATACTGGAATCAACCCCCTTGCAAAATTTGAGAATAACAGCTCA
GCTACCATCTTGCGTTACACACATTTTTCATAAACGCCGTCACCCGGCGT
CGCAGTCGCCAAGTAGAGTGTTGTTGAACACATCAAAAGCCCTTTGGATG
GTGGGGGAGGGTAATAAGCTTGAATTCTAAGCCCAAAGAACGAAATATTA
TCAGTTATAACTGATTGAAGTTTGAGAAATCGCATATTTAATGTTTTGTG
ACGTCATTTGGGCCCTAAATGCAAATGACGTCATCAAAAGGTCAATAAAT
TGTTTACTTCACTGAAATCAATTTGTCATTTACCCAAAAGATTCTCTCTA
TGATTTCCGATCCAATGAGGGGTCAACCATTGCTTAATTTTTTCTCAAAC
TCGAGATATTGAATTTTTCAGGTTTTGATGACATCATCGGACCCAAAATG
CCTTAATTTGAATACATTTATTTTCGAAAGTTTCTATATACCCACTGTTA
CCCCTCCTATCTTATTCCCCATCGAATTTTCGATCCAATAAGCCTCTCCA
AATGTTTTTGTGCTTAGAATTTACTTCTTTAAGGTGGCATTCTTGTCCGA
GCCTCTGGTTTCTGTAGCAGGTGATATGTATCAGTGATATGTATTGGAAA
ATCCATAAAATTTGCTCTATTTTCTTGGCAAGTATCGGAAAATCCAAGGT
TTTCCCATAAAAAATCTTGAATGTTACGGAAATATCCTGAAGTTTTTCAA
AAGTAAATTGCTACGGAAAATCCATGTCGTCCACAAGGGGTAACGGACTA
TAACTTGAACCGCCTAATACAGGTGACTTTTTTATTCCATCTGCTTACTA
AACAATTTTTTTATAATTTGAAAAGTTCGCAAAGTGTGTATCTAGCTCTT
TCAGAAAATATCAAATAGAGGCATGGAAGACATGGGAATATTCCAGACCT
GATCAATCAAACTTGTCGAACCAATCGATGCGATATCAAACAATCAAACC
CCATCGAACGACTAAAGCTTGATATAAAAAATTAATCAAACCTAATCGAA
CACTCGCAATTTTTGATACAATACCGTGAGATCGGGTAACTTGCATCAGT
GGAGGCTAACATGCATAGCCCTCAAATGAATGACCTGGCTGGTCATTAAA
ATACAAAGTTAAATCAAAACAAAAACGGTAGAGTGGAGCTGTGAGCGGAG
CTGCGTAGTTCATTTGCTTTGAAATTTTGCTGCTTTGATTGATCCGTCAA
GATTAATGCTGCAAATGAAATTAGTATTTTTGAAAACTATGAGAAATTGC
CTAAAATTTGAACCAAGCCAACCTTGAAACTAATTTTAAGATCAACTTCC
TAAGAAAAAGATCTACGGGGGAGACCGAACCCACCTAGATTCACACATCG
CTGGATAGGCTATTTCCAGAATTAAAATAAAGGGATAATGATAATCGGAA
TCAGTGGATAGTATTTAATTATCATTATCCCTCACCCTTTATTGGTCCTC
ACAATGATCTTTCTATTAATAATTACTGTATTGTTTTATATTGCCATGTT
TCCATATTTCCTTCCAGTGACTGAATTCTCCAAAAAGACTGGTGATTATA
AAAGTCTGTCAGCTGTTGATATTCGTGTATTGGCATTGACATATCAATTA
GAGAAAGAGTTTGGATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAAC
GGTGTGTATACCATTCTCTAACAGTTGCTAAACTATTTTCAGAAGAGAGT
TGATTTAACATGGTACTTAGGCAATAAATTTTCTTATTCAATTACAAATT
TCAATTTTTTATACTTTTCCTTAATATACCTTGATGGAGAAATTTTGAAA
TTGTAGATGATTTCTTTCGGTAAACTAAAACACTATTTTCATTTCTCTTC
TACCAGACTCAAATAGTGCAACATTCCAAGGTCAAGTCAGATAAACGTTT
GGCGGGATTTTATTCTGAACCAAAAGAGGTAAGTAATTTATTTGGCTTAC
TAAAAAGCAAGTATCTGAATTAATTTTTTCAGTTCATATATATAAATTAG
TTTGCAAATAATTTACCCTTGCTACAATTCATTGCTTTGATAGAATATTC
ACACAAACAACTGGAGTGAACAGAACTTTTCTTACAATCATTTTCAGTCT
TCGTTGGATGCTCAAGATGACAATGGCACAACGACAGGAGAGGAAGATAC
AAAAATGGAGTCCTCTTCAGATAAGTCTGAAGAAAACGAAAACAATAACA
ATATATCGACAGAAGAAGATGAAAGAGATGAATTAGAAGAAATGGATGAA
GAAGGTAAGAACAACTGATAGGAATGTTAAAAATAAAAAAACTTAATTGC
TTTTTATTAAATCTTGTTTTCTCTTATTAGAAATGAACGAAGAAGGGACG
GAAGAAAATGAAGACGATGGTGGGGGTTGGATTACACCAGGGAATATCAA
AAAAGTCAAACGAGAAATGGGTTGCAATGATGAAATTGATATGGAAAACT
CAGACATTAAATGTGCATGTCTAACTACAGATTTTGCGATGCAGGTTAGT
TTTATGATTAAAACGGTTTTAAGGCTCATTTTATTCAAAGATCTTCAAAT
CATCTCTCCACTGTGTGCTTGTTGCCATATTATTATATGAATTATCTTGT
TGACTGAAATTTATAAATTATCTTAAGTTCCCTTGAGACTGCAATGGCTT
GTCTATTATTAAGCCAGTTCTGCTTCATTAAATGTCTGTAAATTGACGTG
GTCTAAGCTTTTGGATATTCCTATGCTATGAGTCTGCTATATGATCTGCA
AAAAGACAGTTTTTAAATTTCTTTAGAATGTTCTCATACAAATGGGTTTG
CATGTAATGTCTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAATTATAT
CCAAAAATGCTTTGGTTGTAATAAGTGAGTAAAAATAATGTGCTTTAGAA
CTTTTTTTCATTTTCAGCTATATTATAAGAGATGTTTGATTTTTCCATAG
TATAGTTTGTTTTATTTTATTTTATTATTTTATTTTCATCCTCCTTTCTG
GATGAGGCCTAGTCCTCCCTTATAATATCATGTTGTCTATTAAGAAAGAA
AGGTTTTACTAATGACACTGAAATTTTTACAGGTCTCAGCCGTAAATTTA
TAACTAAATCCTAATATTTCTATCTTCAGAGAAACACACGATATGGAGAA
GATATTTTGTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGTGA
CTATCGGTGAAGATGGAGTCATTCAATATCATTTACCAAAACGGAAAAAG
AATCACAACCTTCGAGGAACTAAAGTAAGCTAATGTACTGTAACTCTTTT
TCCTGGCTAATGATTTTATTTTTCTTGCAAAATACAAATGCTACTCTTTT
TTCCAAAATTGTATGATGACTATCCTTGAAAGTATCAAAATTATTTTCTC
GAACCTGCCAAATGATTTTCATTGAAAAAAAAATACAGAATTATTTTATT
TCTAAACTGTATGACGATTTTCCTTTTTCTATGTGAGTCTTTTCAAAACT
ACAGGATTTTCCTTGGAAAATAGAAGAATGATTTATTTTCAAAGAAACAG
GGTGATTTTCCTTGGAAAATACAAGAATGATTTAGTTTCAAGCCTACAGG
ATGATTTTCCTTGGAAAATACAAGAATGGTCCTTTTTCGAACCTATACAT
GTTTTTTTTTATAAGCATAACGCTTATAAGCATATGAGGGCTCAGATTTG
CAGATTTCCTAAACATAACATAAGCATATACGCTAGCCTGAAATATTTTT
CAAGTAGCCAATCTCTTTCTATTCAAAAAGGTTTGCAAGTGGTCAAGTAA
AAAAATACATTCCACGGCTAGCCACATTCCACTGCTCAAAAATTTAAATG
TTTTTTGAATCGAATATTAACAAAATTTTAAAGATTTTACTAAAAATTTG
GTTGGGTGAATCAAAAGCATAATAATTCTTAAGCATATAATAAGCATATA
ATAAGCATATTCTATGTCTGGATGCTTTGAAAGCTTAAGCATACTCGAGC
CTGACCAAGGGGCATACACTTGCTTATAAAAAAAAAACATGTAAGTTAAT
ACAAGAGTTTCTTTTCAAACTTACAGGGGATGATTTTCCTAGTGATTTTC
CTAGGAAAATACAAGAATGATTCTTTTTCAAAAATATCTTCAATGCTTCA
AGATTATCTTGTTAAAATATAAATATTCTCTCGTTGGAATTATTATCGTT
TGCTTCAATATGATTTAGGCTTGGGGACAGGAGAAGTTTTTTTTCGCGTT
GGTTCAATGGTTCAATATCCCACCAACACACAAAAAAGTGCCTGTCTCAT
GGTTTATTTTTTTTTATTTCATGGGACAAAAAGTGAGGGAAATACCCAAA
TACCCGTGGAGACACGAGAAAGCGTTTCAGGTATGTTGCATTGCACCAAC
GCGAAAAAAACTTCTCGTGTCCCCAAGCCTTTACTGTTTATTAATTTAAG
AAATTATCATTTTCAAAAGCAAAATATGTAATTTAAACATTCAATTATAT
TTTTTCTTTCAGTTTTCGATGCCATTACCCAAAGGTGGCCGACACAGTGA
CCAACCGTATCTCTTAACAGAAGACCAGCATTTCTCGAAAGACCGTATGC
CGCAAAATCGCGATAAAGTAAATCCAATGGATCCGGATTACGTATCGCGA
GTAAACCCGTTTACACAAAACGACGTTAACAGTCGAGCTTTTCATTTGAA
CCTTCACGTAAAAAATAAACAACCACGTAACCCAAATGAAACACGTAAGA
AAAAGTCTGGACGTAAGAAGTAGGTGTTATTATTTCATGCATAATGATTG
TCACTTATTTTCTACAAACAATTTTTTTATATAAAATAATTTNCAAAAAT
AAACAACCACGTAACCCGAATGAAACACGTAAGAAAAAGTCTGGACGTAA
GAAGTAGGTGTTATTATTTCATGCATAATGATTGTCACTTATTTTCTACA
AACAATTTTTTTATATAAAATAATTTCAATGAGATAATGGTTACAAATAT
TAATCACAAAAGAAAATATATCAATTTCCTGTTTTTCAATTTTCTGGTTT
CTCCTCGTTCTACTGAGTACCTTAATTAAGGGAAGACATTTTTGGGGGAA
TTCAATTTAGTGCAGGAATTTAATTTGATGGATTCTGGCAAATTTTCTTT
CCCTCTAGATTTCTCCACTTAAGGTAACTAAACACTTTTTGACTTAAAAA
TAAAGTTTTTTAAAAATTGTAGTAAATCAAATATGTTATAATGTCAAAGT
AATAATAATAATAACAAATATTTTACGTGGCATGCTTCGAAAAATTCAAC
AGCTTTTAGACAGCTGATGAATTGTTTCCACGAAGGGCCACAAAAAAGTG
GAACGAATTTTGACAAAGTTGGGCTCTGAATTTTAAACAACAAAACCCTG
TTTAGAGATGCACTTGTCTCTTTTTGTGAATTTCGAAGCACTCAATGTGA
AATGATTCTCCTTATCAACTCGTCCATCACCTCTTATAAGAACTTGGATG
GCGCCATCTTGAGAAGGGTCTTTCAAGTGCACGGTAACGAAATTGACAAC
TGCTCCACTGGTATCGTAGTATGGTGCTTTTTCGGTTGACGTACAATTTG
TTTCGTGTGTACATGCATAAGTTGCGAATCCTGAAAATTCATCTGTTCCC
AATACTGAGATGACTACGTCTCCAGGGAACTGTTAACGTAGAAATGTAAA
CATTTTAATTACAATTTGTAGGTGTCCTTCTCTTACGACATTGAGCACTT
CTCGATACATATGTCTTTTTCATAAATCTTTTTCTATACTTTTTTTTAGG
TTATGATCTTATAACATGCACTAAGTTATAAAATTTATTTGTTTATTCGT
CCTTTAGACTTACCTTAGCCGTGTTGAAGCAATAACCCAATTCAAAGCCT
ACAACATCAGCTGTTTGAACGACTTCGTCTGCAGTAGTTTTGAAAATGGT
AACCATATCTTGTGTTGTCTCTGCACCTGTAATTAACAAGTGTTTAAGCT
ATG

Coding sequence (CDS) from alignment at scaffold_86:647127..661679-

>TCONS_00073006 ID=TCONS_00073006|Name=TCONS_00073006|organism=Clytia hemisphaerica|type=CDS|length=10080bp|location=Sequence derived from alignment at scaffold_86:647127..661679- (Clytia hemisphaerica)
TTTTCGATGCCATTACCCAAAGGTGGCCGACACAGTGACCAACCGTATCT
CTTAACAGAAGACCAGCATTTCTCGAAAGACCGTATGCCGCAAAATCGCG
ATAAAGTAAATCCAATGGATCCGGATTACGTATCGCGAGTAAACCCGTTT
ACACAAAACGACGTTAACAGTCGAGCTTTTCATTTGAACCTTCACGTAAA
AAATAAACAACCACGTAACCCAAATGAAACACGTAAGAAAAAGTCTGGAC
GTAAGAAGTAGAGAAACACACGATATGGAGAAGATATTTTGTCCGTCTTG
TGGAAATAAAACTTTGATGAAGATCTCCGTGACTATCGGTGAAGATGGAG
TCATTCAATATCATTTACCAAAACGGAAAAAGAATCACAACCTTCGAGGA
ACTAAAAATGTTCTCATACAAATGGGTTTGCATGTAATGTCTGTCCAAGG
AAGATTGATTCGTCAAGCAAGAAATTATATCCAAAAATGCTTTGGTTGTA
ATAAAAATGAACGAAGAAGGGACGGAAGAAAATGAAGACGATGGTGGGGG
TTGGATTACACCAGGGAATATCAAAAAAGTCAAACGAGAAATGGGTTGCA
ATGATGAAATTGATATGGAAAACTCAGACATTAAATGTGCATGTCTAACT
ACAGATTTTGCGATGCAGTCTTCGTTGGATGCTCAAGATGACAATGGCAC
AACGACAGGAGAGGAAGATACAAAAATGGAGTCCTCTTCAGATAAGTCTG
AAGAAAACGAAAACAATAACAATATATCGACAGAAGAAGATGAAAGAGAT
GAATTAGAAGAAATGGATGAAGAAGACTCAAATAGTGCAACATTCCAAGG
TCAAGTCAGATAAACGTTTGGCGGGATTTTATTCTGAACCAAAAGAGTGA
CTGAATTCTCCAAAAAGACTGGTGATTATAAAAGTCTGTCAGCTGTTGAT
ATTCGTGTATTGGCATTGACATATCAATTAGAGAAAGAGTTTGGATCTCC
AGAAAATATCAAGCTTGAACCAAAGAAAACGATGGCGGACAAAGCAGAAG
AAAAAATGCCAGAATCCAAAAAATTGAAGTGCATTATCGCCGATTCAGCA
GCATTTTTGAAAAATGTTGACCTTCAAAATCTTTCAGAACGCATTTTCAC
CATCAACGAAGTAATAAGGGAGATCCGAGACTCAGCCACAAGGAAACGAT
TGGCTGTTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTCCACAGAATCA
CTAAGTGCAGTTTTCGATGCCATTACCCAAAGGTGGCCGACACAGTGACC
AACCGTATCTCTTAACAGAAGACCAGCATTTCTCGAAAGACCGTATGCCG
CAAAATCGCGATAAAGTAAATCCAATGGATCCGGATTACGTATCGCGAGT
AAACCCGTTTACACAAAACGACGTTAACAGTCGAGCTTTTCATTTGAACC
TTCACGTAAAAAATAAACAACCACGTAACCCAAATGAAACACGTAAGAAA
AAGTCTGGACGTAAGAAGTAGAGAAACACACGATATGGAGAAGATATTTT
GTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGTGACTATCGGT
GAAGATGGAGTCATTCAATATCATTTACCAAAACGGAAAAAGAATCACAA
CCTTCGAGGAACTAAAAATGTTCTCATACAAATGGGTTTGCATGTAATGT
CTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAATTATATCCAAAAATGC
TTTGGTTGTAATAAAAATGAACGAAGAAGGGACGGAAGAAAATGAAGACG
ATGGTGGGGGTTGGATTACACCAGGGAATATCAAAAAAGTCAAACGAGAA
ATGGGTTGCAATGATGAAATTGATATGGAAAACTCAGACATTAAATGTGC
ATGTCTAACTACAGATTTTGCGATGCAGTCTTCGTTGGATGCTCAAGATG
ACAATGGCACAACGACAGGAGAGGAAGATACAAAAATGGAGTCCTCTTCA
GATAAGTCTGAAGAAAACGAAAACAATAACAATATATCGACAGAAGAAGA
TGAAAGAGATGAATTAGAAGAAATGGATGAAGAAGACTCAAATAGTGCAA
CATTCCAAGGTCAAGTCAGATAAACGTTTGGCGGGATTTTATTCTGAACC
AAAAGAGTGACTGAATTCTCCAAAAAGACTGGTGATTATAAAAGTCTGTC
AGCTGTTGATATTCGTGTATTGGCATTGACATATCAATTAGAGAAAGAGT
TTGGATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAACGATGGCGGAC
AAAGCAGAAGAAAAAATGCCAGAATCCAAAAAATTGAAGTGCATTATCGC
CGATTCAGCAGCATTTTTGAAAAATGTTGACCTTCAAAATCTTTCAGAAC
GCATTTTCACCATCAACGAAGTAATAAGGGAGATCCGAGACTCAGCCACA
AGGAAACGATTGGCTGTTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTC
CACAGAATCACTAAGTGCAGTTTTCGATGCCATTACCCAAAGGTGGCCGA
CACAGTGACCAACCGTATCTCTTAACAGAAGACCAGCATTTCTCGAAAGA
CCGTATGCCGCAAAATCGCGATAAAGTAAATCCAATGGATCCGGATTACG
TATCGCGAGTAAACCCGTTTACACAAAACGACGTTAACAGTCGAGCTTTT
CATTTGAACCTTCACGTAAAAAATAAACAACCACGTAACCCAAATGAAAC
ACGTAAGAAAAAGTCTGGACGTAAGAAGTAGAGAAACACACGATATGGAG
AAGATATTTTGTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGT
GACTATCGGTGAAGATGGAGTCATTCAATATCATTTACCAAAACGGAAAA
AGAATCACAACCTTCGAGGAACTAAAAATGTTCTCATACAAATGGGTTTG
CATGTAATGTCTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAATTATAT
CCAAAAATGCTTTGGTTGTAATAAAAATGAACGAAGAAGGGACGGAAGAA
AATGAAGACGATGGTGGGGGTTGGATTACACCAGGGAATATCAAAAAAGT
CAAACGAGAAATGGGTTGCAATGATGAAATTGATATGGAAAACTCAGACA
TTAAATGTGCATGTCTAACTACAGATTTTGCGATGCAGTCTTCGTTGGAT
GCTCAAGATGACAATGGCACAACGACAGGAGAGGAAGATACAAAAATGGA
GTCCTCTTCAGATAAGTCTGAAGAAAACGAAAACAATAACAATATATCGA
CAGAAGAAGATGAAAGAGATGAATTAGAAGAAATGGATGAAGAAGACTCA
AATAGTGCAACATTCCAAGGTCAAGTCAGATAAACGTTTGGCGGGATTTT
ATTCTGAACCAAAAGAGTGACTGAATTCTCCAAAAAGACTGGTGATTATA
AAAGTCTGTCAGCTGTTGATATTCGTGTATTGGCATTGACATATCAATTA
GAGAAAGAGTTTGGATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAAC
GATGGCGGACAAAGCAGAAGAAAAAATGCCAGAATCCAAAAAATTGAAGT
GCATTATCGCCGATTCAGCAGCATTTTTGAAAAATGTTGACCTTCAAAAT
CTTTCAGAACGCATTTTCACCATCAACGAAGTAATAAGGGAGATCCGAGA
CTCAGCCACAAGGAAACGATTGGCTGTTTTGCCGTACGAGATTGAGTTCA
GGGAGCCCTCCACAGAATCACTAAGTGCAGTTTTCGATGCCATTACCCAA
AGGTGGCCGACACAGTGACCAACCGTATCTCTTAACAGAAGACCAGCATT
TCTCGAAAGACCGTATGCCGCAAAATCGCGATAAAGTAAATCCAATGGAT
CCGGATTACGTATCGCGAGTAAACCCGTTTACACAAAACGACGTTAACAG
TCGAGCTTTTCATTTGAACCTTCACGTAAAAAATAAACAACCACGTAACC
CAAATGAAACACGTAAGAAAAAGTCTGGACGTAAGAAGTAGAGAAACACA
CGATATGGAGAAGATATTTTGTCCGTCTTGTGGAAATAAAACTTTGATGA
AGATCTCCGTGACTATCGGTGAAGATGGAGTCATTCAATATCATTTACCA
AAACGGAAAAAGAATCACAACCTTCGAGGAACTAAAAATGTTCTCATACA
AATGGGTTTGCATGTAATGTCTGTCCAAGGAAGATTGATTCGTCAAGCAA
GAAATTATATCCAAAAATGCTTTGGTTGTAATAAAAATGAACGAAGAAGG
GACGGAAGAAAATGAAGACGATGGTGGGGGTTGGATTACACCAGGGAATA
TCAAAAAAGTCAAACGAGAAATGGGTTGCAATGATGAAATTGATATGGAA
AACTCAGACATTAAATGTGCATGTCTAACTACAGATTTTGCGATGCAGTC
TTCGTTGGATGCTCAAGATGACAATGGCACAACGACAGGAGAGGAAGATA
CAAAAATGGAGTCCTCTTCAGATAAGTCTGAAGAAAACGAAAACAATAAC
AATATATCGACAGAAGAAGATGAAAGAGATGAATTAGAAGAAATGGATGA
AGAAGACTCAAATAGTGCAACATTCCAAGGTCAAGTCAGATAAACGTTTG
GCGGGATTTTATTCTGAACCAAAAGAGTGACTGAATTCTCCAAAAAGACT
GGTGATTATAAAAGTCTGTCAGCTGTTGATATTCGTGTATTGGCATTGAC
ATATCAATTAGAGAAAGAGTTTGGATCTCCAGAAAATATCAAGCTTGAAC
CAAAGAAAACGATGGCGGACAAAGCAGAAGAAAAAATGCCAGAATCCAAA
AAATTGAAGTGCATTATCGCCGATTCAGCAGCATTTTTGAAAAATGTTGA
CCTTCAAAATCTTTCAGAACGCATTTTCACCATCAACGAAGTAATAAGGG
AGATCCGAGACTCAGCCACAAGGAAACGATTGGCTGTTTTGCCGTACGAG
ATTGAGTTCAGGGAGCCCTCCACAGAATCACTAAGTGCAGTTTTCGATGC
CATTACCCAAAGGTGGCCGACACAGTGACCAACCGTATCTCTTAACAGAA
GACCAGCATTTCTCGAAAGACCGTATGCCGCAAAATCGCGATAAAGTAAA
TCCAATGGATCCGGATTACGTATCGCGAGTAAACCCGTTTACACAAAACG
ACGTTAACAGTCGAGCTTTTCATTTGAACCTTCACGTAAAAAATAAACAA
CCACGTAACCCAAATGAAACACGTAAGAAAAAGTCTGGACGTAAGAAGTA
GAGAAACACACGATATGGAGAAGATATTTTGTCCGTCTTGTGGAAATAAA
ACTTTGATGAAGATCTCCGTGACTATCGGTGAAGATGGAGTCATTCAATA
TCATTTACCAAAACGGAAAAAGAATCACAACCTTCGAGGAACTAAAAATG
TTCTCATACAAATGGGTTTGCATGTAATGTCTGTCCAAGGAAGATTGATT
CGTCAAGCAAGAAATTATATCCAAAAATGCTTTGGTTGTAATAAAAATGA
ACGAAGAAGGGACGGAAGAAAATGAAGACGATGGTGGGGGTTGGATTACA
CCAGGGAATATCAAAAAAGTCAAACGAGAAATGGGTTGCAATGATGAAAT
TGATATGGAAAACTCAGACATTAAATGTGCATGTCTAACTACAGATTTTG
CGATGCAGTCTTCGTTGGATGCTCAAGATGACAATGGCACAACGACAGGA
GAGGAAGATACAAAAATGGAGTCCTCTTCAGATAAGTCTGAAGAAAACGA
AAACAATAACAATATATCGACAGAAGAAGATGAAAGAGATGAATTAGAAG
AAATGGATGAAGAAGACTCAAATAGTGCAACATTCCAAGGTCAAGTCAGA
TAAACGTTTGGCGGGATTTTATTCTGAACCAAAAGAGTGACTGAATTCTC
CAAAAAGACTGGTGATTATAAAAGTCTGTCAGCTGTTGATATTCGTGTAT
TGGCATTGACATATCAATTAGAGAAAGAGTTTGGATCTCCAGAAAATATC
AAGCTTGAACCAAAGAAAACGATGGCGGACAAAGCAGAAGAAAAAATGCC
AGAATCCAAAAAATTGAAGTGCATTATCGCCGATTCAGCAGCATTTTTGA
AAAATGTTGACCTTCAAAATCTTTCAGAACGCATTTTCACCATCAACGAA
GTAATAAGGGAGATCCGAGACTCAGCCACAAGGAAACGATTGGCTGTTTT
GCCGTACGAGATTGAGTTCAGGGAGCCCTCCACAGAATCACTAAGTGCAG
TTTTCGATGCCATTACCCAAAGGTGGCCGACACAGTGACCAACCGTATCT
CTTAACAGAAGACCAGCATTTCTCGAAAGACCGTATGCCGCAAAATCGCG
ATAAAGTAAATCCAATGGATCCGGATTACGTATCGCGAGTAAACCCGTTT
ACACAAAACGACGTTAACAGTCGAGCTTTTCATTTGAACCTTCACGTAAA
AAATAAACAACCACGTAACCCAAATGAAACACGTAAGAAAAAGTCTGGAC
GTAAGAAGTAGAGAAACACACGATATGGAGAAGATATTTTGTCCGTCTTG
TGGAAATAAAACTTTGATGAAGATCTCCGTGACTATCGGTGAAGATGGAG
TCATTCAATATCATTTACCAAAACGGAAAAAGAATCACAACCTTCGAGGA
ACTAAAAATGTTCTCATACAAATGGGTTTGCATGTAATGTCTGTCCAAGG
AAGATTGATTCGTCAAGCAAGAAATTATATCCAAAAATGCTTTGGTTGTA
ATAAAAATGAACGAAGAAGGGACGGAAGAAAATGAAGACGATGGTGGGGG
TTGGATTACACCAGGGAATATCAAAAAAGTCAAACGAGAAATGGGTTGCA
ATGATGAAATTGATATGGAAAACTCAGACATTAAATGTGCATGTCTAACT
ACAGATTTTGCGATGCAGTCTTCGTTGGATGCTCAAGATGACAATGGCAC
AACGACAGGAGAGGAAGATACAAAAATGGAGTCCTCTTCAGATAAGTCTG
AAGAAAACGAAAACAATAACAATATATCGACAGAAGAAGATGAAAGAGAT
GAATTAGAAGAAATGGATGAAGAAGACTCAAATAGTGCAACATTCCAAGG
TCAAGTCAGATAAACGTTTGGCGGGATTTTATTCTGAACCAAAAGAGTGA
CTGAATTCTCCAAAAAGACTGGTGATTATAAAAGTCTGTCAGCTGTTGAT
ATTCGTGTATTGGCATTGACATATCAATTAGAGAAAGAGTTTGGATCTCC
AGAAAATATCAAGCTTGAACCAAAGAAAACGATGGCGGACAAAGCAGAAG
AAAAAATGCCAGAATCCAAAAAATTGAAGTGCATTATCGCCGATTCAGCA
GCATTTTTGAAAAATGTTGACCTTCAAAATCTTTCAGAACGCATTTTCAC
CATCAACGAAGTAATAAGGGAGATCCGAGACTCAGCCACAAGGAAACGAT
TGGCTGTTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTCCACAGAATCA
CTAAGTGCAGTTTTCGATGCCATTACCCAAAGGTGGCCGACACAGTGACC
AACCGTATCTCTTAACAGAAGACCAGCATTTCTCGAAAGACCGTATGCCG
CAAAATCGCGATAAAGTAAATCCAATGGATCCGGATTACGTATCGCGAGT
AAACCCGTTTACACAAAACGACGTTAACAGTCGAGCTTTTCATTTGAACC
TTCACGTAAAAAATAAACAACCACGTAACCCAAATGAAACACGTAAGAAA
AAGTCTGGACGTAAGAAGTAGAGAAACACACGATATGGAGAAGATATTTT
GTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGTGACTATCGGT
GAAGATGGAGTCATTCAATATCATTTACCAAAACGGAAAAAGAATCACAA
CCTTCGAGGAACTAAAAATGTTCTCATACAAATGGGTTTGCATGTAATGT
CTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAATTATATCCAAAAATGC
TTTGGTTGTAATAAAAATGAACGAAGAAGGGACGGAAGAAAATGAAGACG
ATGGTGGGGGTTGGATTACACCAGGGAATATCAAAAAAGTCAAACGAGAA
ATGGGTTGCAATGATGAAATTGATATGGAAAACTCAGACATTAAATGTGC
ATGTCTAACTACAGATTTTGCGATGCAGTCTTCGTTGGATGCTCAAGATG
ACAATGGCACAACGACAGGAGAGGAAGATACAAAAATGGAGTCCTCTTCA
GATAAGTCTGAAGAAAACGAAAACAATAACAATATATCGACAGAAGAAGA
TGAAAGAGATGAATTAGAAGAAATGGATGAAGAAGACTCAAATAGTGCAA
CATTCCAAGGTCAAGTCAGATAAACGTTTGGCGGGATTTTATTCTGAACC
AAAAGAGTGACTGAATTCTCCAAAAAGACTGGTGATTATAAAAGTCTGTC
AGCTGTTGATATTCGTGTATTGGCATTGACATATCAATTAGAGAAAGAGT
TTGGATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAACGATGGCGGAC
AAAGCAGAAGAAAAAATGCCAGAATCCAAAAAATTGAAGTGCATTATCGC
CGATTCAGCAGCATTTTTGAAAAATGTTGACCTTCAAAATCTTTCAGAAC
GCATTTTCACCATCAACGAAGTAATAAGGGAGATCCGAGACTCAGCCACA
AGGAAACGATTGGCTGTTTTGCCGTACGAGATTGAGTTCAGGGAGCCCTC
CACAGAATCACTAAGTGCAGTTTTCGATGCCATTACCCAAAGGTGGCCGA
CACAGTGACCAACCGTATCTCTTAACAGAAGACCAGCATTTCTCGAAAGA
CCGTATGCCGCAAAATCGCGATAAAGTAAATCCAATGGATCCGGATTACG
TATCGCGAGTAAACCCGTTTACACAAAACGACGTTAACAGTCGAGCTTTT
CATTTGAACCTTCACGTAAAAAATAAACAACCACGTAACCCAAATGAAAC
ACGTAAGAAAAAGTCTGGACGTAAGAAGTAGAGAAACACACGATATGGAG
AAGATATTTTGTCCGTCTTGTGGAAATAAAACTTTGATGAAGATCTCCGT
GACTATCGGTGAAGATGGAGTCATTCAATATCATTTACCAAAACGGAAAA
AGAATCACAACCTTCGAGGAACTAAAAATGTTCTCATACAAATGGGTTTG
CATGTAATGTCTGTCCAAGGAAGATTGATTCGTCAAGCAAGAAATTATAT
CCAAAAATGCTTTGGTTGTAATAAAAATGAACGAAGAAGGGACGGAAGAA
AATGAAGACGATGGTGGGGGTTGGATTACACCAGGGAATATCAAAAAAGT
CAAACGAGAAATGGGTTGCAATGATGAAATTGATATGGAAAACTCAGACA
TTAAATGTGCATGTCTAACTACAGATTTTGCGATGCAGTCTTCGTTGGAT
GCTCAAGATGACAATGGCACAACGACAGGAGAGGAAGATACAAAAATGGA
GTCCTCTTCAGATAAGTCTGAAGAAAACGAAAACAATAACAATATATCGA
CAGAAGAAGATGAAAGAGATGAATTAGAAGAAATGGATGAAGAAGACTCA
AATAGTGCAACATTCCAAGGTCAAGTCAGATAAACGTTTGGCGGGATTTT
ATTCTGAACCAAAAGAGTGACTGAATTCTCCAAAAAGACTGGTGATTATA
AAAGTCTGTCAGCTGTTGATATTCGTGTATTGGCATTGACATATCAATTA
GAGAAAGAGTTTGGATCTCCAGAAAATATCAAGCTTGAACCAAAGAAAAC
GATGGCGGACAAAGCAGAAGAAAAAATGCCAGAATCCAAAAAATTGAAGT
GCATTATCGCCGATTCAGCAGCATTTTTGAAAAATGTTGACCTTCAAAAT
CTTTCAGAACGCATTTTCACCATCAACGAAGTAATAAGGGAGATCCGAGA
CTCAGCCACAAGGAAACGATTGGCTGTTTTGCCGTACGAGATTGAGTTCA
GGGAGCCCTCCACAGAATCACTAAGTGCAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_045281	XLOC_045281	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00073006-protein	TCONS_00073006-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_86	supercontig	scaffold_86:647127..661679 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.1872	35.9752	16.7823	13.8404	32.3022	24.8893	26.3928	29.7087	29.5746	30.2268	34.894	34.5925	60.0849	69.4703	45.0028	45.725	24.1829	34.1229	23.0497	23.1054	38.0418	34.4616	65.967	56.4187	40.5628	49.2621	30.6836	40.3653	51.987	54.4867

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR014881	NOB1_Zn-bd
IPR033411	Ribonuclease_PIN
IPR017117	Nob1_euk
IPR029060	PIN_domain-like

Vocabulary: **Biological Process**
Term	Definition
GO:0042274	ribosomal small subunit biogenesis
GO:0000469	cleavage involved in rRNA processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0004521	endoribonuclease activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0042274	ribosomal small subunit biogenesis
molecular_function	GO:0004521	endoribonuclease activity

Blast

[Close]

BLAST of TCONS_00073006 vs. Swiss-Prot (Human)
Match: NOB1 (RNA-binding protein NOB1 OS=Homo sapiens GN=NOB1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.535e-57
Identity = 98/205 (47.80%), Postives = 141/205 (68.78%), Query Frame = 1

Query:  715 WITPGNIKKVKREMGCNDEIDMENSDIKCACLTTDFAMQNVLIQMGLHVMSVQGRLIRQARNYIQKCFGCNKETHDMEKIFCPSCGNKTLMKISVTIGEDGVIQYHLPKRKKNHNLRGTKFSMPLPKGGRHSDQPYLLTEDQHFSKDRMPQN-RDKVNPMDPDYVSRVNPFTQNDVNSRAFHLNLH----VKNKQPRNPNETRKK 1314
            WITP NIK++++E+   ++ D+   D++  CLTTDFAMQNVL+QMGLHV++V G LIR+AR+YI +C GC K T DM ++FC  CGNKTL K+SVT+ +DG +  H  +  K  N RG ++S+P PKGG+++  P+ LTEDQ F + R+ Q  R K N   PDY++ V+PF +ND++SR+  L +        ++  NPN +RKK
Sbjct:  208 WITPSNIKQIQQEL---EQCDVPE-DVRVGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSYILRCHGCFKTTSDMSRVFCSHCGNKTLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAINPH-LTEDQRFPQLRLSQKARQKTNVFAPDYIAGVSPFVENDISSRSATLQVRDSTLGAGRRRLNPNASRKK 407

HSP 2 Score: 134.42 bits (337), Expect = 2.205e-33
Identity = 67/125 (53.60%), Postives = 92/125 (73.60%), Query Frame = 1

Query:  127 IIADSAAFLKNVDLQNLSERIFTINEVIREIRDSATRKRLAVLPYEIEFREPSTESLSAVTEFSKKTGDYKSLSAVDIRVLALTYQLEKEFGSPENIKLEPK--KTTQIVQHSKVKSDKRLAGFY 495
            ++AD+ AFL++  LQ++ + I+TI EV+ EIRD ATR+RLAVLPYE+ F+EP  E +  VTEFSKKTGDY SLSA DI+VLALTYQLE EF    ++K EP+  K +  +QH   ++   ++GF+
Sbjct:    7 VVADAGAFLRHAALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLVTEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHP--ETPLHISGFH 129

The following BLAST results are available for this feature:

BLAST of TCONS_00073006 vs. Swiss-Prot (Human)

BLAST of TCONS_00073006 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOB1	2.535e-57	47.80	RNA-binding protein NOB1 OS=Homo sapiens GN=NOB1 P...	[more]

You are here

TCONS_00073006 (transcript) - C. hemisphaerica