TCONS_00073052 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073052
Unique NameTCONS_00073052
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1827

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073052 ID=TCONS_00073052|Name=TCONS_00073052|organism=Clytia hemisphaerica|type=transcript|length=1827bp
GTTTTTACCTattaaattcaagaaaaaaacaatatcCAGAGCTTTTCGAC
TAGCGGGATTTCTCGCAGATTCCCAACGTGCGGAAAAGGTCAGTATATAA
GaccgaaaatgaaagtgaaagtgaaattgCGTTTTGAGCCAGATTCCAGG
AAGAATACACAGTCAGTCGTCTCTTGCACATCTAACACAGTGATATTTTG
AGATAATGGATACACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATT
CGACCATATGTCAGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTT
TGGCCTTGAACTTGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATG
ATGATAGAAACTTTCGGGTTCAAGGTCGACTGAAGAATGATGACATCACA
AGAAAATTcgttctgaaaattttcaattttggatcAGCACCAAAACTTTC
AATGGAGCTAGCTGTTGATCTATTAATACGATGTGGTGAACAATGTTCTG
ATTATTTAAAAGTCTCTACACCAATCAAATCTTTACAAAACGGTCATTCT
ACTGAAAATGTTGAATTTATTTCAAGTTTTGATATTCCTGTACTTGAATT
TGCATCATATAATAATTGCACAAAAGAAGATTTGATTGAAACAGGGGCAC
TGAGAGTTGGTACATCAGGAGAAGTGACTTGTCGCCATCATGTGAGACTA
CTGACTTATCTTGAAGGAAGagttcctgatttttgtaaagaCAATCTTAC
AGACTCTTTCGTTCGACATTGGGGTGCAACTTGTGCAAGAATTTGTAATG
CATTTGAAGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATGG
AACCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCTG
TATCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAGT
TCGAAACTGAAACGTTACCTCTGctgaaaaaacatttaaaaatgtcATAC
ATACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATAG
CATTGATGGAGTAttggattttgatgatatagcaTGGTCGTTCCCGGTTG
TCGATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGAG
GAtatatttcataatttgaatcTACTTTATAAAGGATTTACATCCACACG
TTGTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTAC
GGTATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGAC
CCAGATAATGATTATTTGCTTCTCCATacggcagataattttaaaagaat
aGATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGTT
CAGAAGATTGAGACAAGTTTCTGTTCCTTTCCTTCTTCATTACTTCCCAA
TACAATAACAACATGTTTGACAACATTGTATTCTATAATAAAGGATTAAT
CTAATACTCTACTGATATccaattttaaaaacacttccTTGCCACAGAAC
CTGTGGATAATTCTGTTTCCGTTAGGAAATCCCCTAAACTTGAGAGAAAC
AGTACAATGTTGAGAATTATATCACTACCAAATACCAAAAGGGATTGATC
CTTTTAATACACAACCCCTAATCATAAAGCAACAATCATCGTATGtttct
ttttctaatttgaTAGTTTTCTTTTCGGATTTTGGTTTGTACATTTAAAT
CAAACTGTATTTAAGACTCTTATAATTTTGCTTAGAATTTTAAAATATGT
TAGTGAGAAAGATAATCACGAGAGGAA
Run BLAST on NCBI

protein sequence of TCONS_00073052-protein

>TCONS_00073052-protein ID=TCONS_00073052-protein|Name=TCONS_00073052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MDTQSVFLLDGELRIRPYVSKVQLKEIALKCFGLELDENVKPVEMVSYDD
RNFRVQGRLKNDDITRKFVLKIFNFGSAPKLSMELAVDLLIRCGEQCSDY
LKVSTPIKSLQNGHSTENVEFISSFDIPVLEFASYNNCTKEDLIETGALR
VGTSGEVTCRHHVRLLTYLEGRVPDFCKDNLTDSFVRHWGATCARICNAF
EGEAKSEGDRGGWIWNLVTCPQYLTEDYLSTCIKDHEQRKVLSSIIREFE
TETLPLLKKHLKMSYIHNDLNEANLLVSANDSIDGVLDFDDIAWSFPVVD
LGICMMYLSLASQEEDIFHNLNLLYKGFTSTRCLNDVEDSALYNICLLRY
AEVTVISLYQHEFVDPDNDYLLLHTADNFKRIDYLRSAGPTIFKKRVCSE
D
Run BLAST on NCBI

transcript from alignment at scaffold_86:1029767..1036254-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073052 ID=TCONS_00073052|Name=TCONS_00073052|organism=Clytia hemisphaerica|type=transcript|length=6488bp|location=Sequence derived from alignment at scaffold_86:1029767..1036254- (Clytia hemisphaerica)
GTTTTTACCTATTAAATTCAAGAAAAAAACAATATCCAGAGCTTTTCGAC
TAGCGGGATTTCTCGCAGATTCCCAACGTGCGGAAAAGGTCAGTATATAA
GACCGAAAATGAAAGTGAAAGTGAAATTGCGTTTTGAGCCAGATTCCAGG
AAGAATACACAGTCAGTCGTCTCTTGCACATCTAACACAGTGATATTTTG
AGGTAGGTTTCATTTTTTGTGAGCTAGTCTTAGTAGGTGACACAGATTTT
TTGAAGAAAATGTCCCAATTTTAGAACATAAGAACATCTCATTCACGAAA
ATTTTTAAGCTAATTGAAAAAAATATCCCGGCTGAAAATTTTAAAACTGT
TGCAGAAAGATTTATGATTTTTAAAATAGTCCCTGAATGAATACCGTGAA
GTCGAGTAACTTGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATGAC
AGAGCAATCAAAGCAGAAAAATTTCAAAACAAATGAACTACCGTGAGATT
GGGTAACTTGCATTGCATCAGTCAGTGTATAGACCTAAAGCTCTAAAACA
GCATCTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAA
CTATAAAGTGCACTTACAAACATCAATTTGTCAGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATAACCGCACTGTCATCATTGACAAT
AAAACAAACGATTTTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTCC
ATCGAAATGATCTATCACAACTCAGTCTACCATTTTTAGCGCGATCCGAG
GATTGAGCTGAGAACGCTCCGCGAACTCCTGCGCGGATGAAAAACTTCAA
TCTGCCAATCATTTTCTCAAGCGAAGAGTACGCGAAGCGATTCCAGCTTT
ACGATAGTGCCGCGTGTCATCAATGGATAGTATTCAATTATCATTATCCC
TTTATTTTCATTCCTAGAACTTTTGCGAAAAAAAGGAAAAATAGAAAAGT
TGTATTTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTATG
TGGCGTTTTTTTGCAAACTTCAAAAAACTGATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGCCTTTGCGGGACTTTGGCTTAAGTGCTTGAGTGCAGCATAGGGTA
CAAAGTCCAAACATGCGTTTCCCGTAATTTTTGTGTGAAGAGTTAGGTCT
ATACTGTCAGTGGTAGACAGGAGACCCGTCGTGTTTTTTTTTATAATTTG
ATGTACACAAGCAGACAAGACAGGTTCGAGCTGTGAGTCCAATATATTGG
ATAAACCAAATTTCGAAAGTTGCGCTTTCTCTAAGAAAGTGTGACCAGTA
AAAGAATAGGCCGTTCGTAAAAAATTGTTTGGTTCCCGTCACCCGACGGA
CCGTGATTTCTACTGAAAAATTCTCATTCACATTTTCCTGACAGCTGAAA
CTCCACCATCACCATCCATGTTTTCTTTTTTGAGAGAAAGAGCAAACGCT
AATCTCGCCCAAAAAAACAATTCGAAACCTGTTAATTCTGTTTTTTCCTG
ATTTTCAAGTCCGATTTTTCATTGCGGACCATATGGAAGCATCAAAACAA
ACCAGCGGAGCTTTTGTAAAATGAACAAGAGGCTTAGGGCGATCAAACGT
TTGTTTACCACCCTTTTCTAAGGAAAATTCCGCCCTCTTGGACTGTTTCG
TTCAAACAGAAAATATTTTTCGCCCGACCGACCGACCGACCCACTTTTTT
ATGACTGGAATGACGGGAACCAAGGGATTTTTTACCAACGGCCATAACAA
AATTTGATTGGCTATGTTTTCAACCGTTATTAGGTTCTGAGGAATTCAAA
CTCTCAGCCCGTACCATGCTATACATTTCGCCATCAGTTTATCAAAGAAG
AAATCATAGCATGGATTCTCAGGCTACATCAGTGGAGGCAAACATATATA
GCCCTCAAATGAATGACCTGTCTGCCTGGTCATTAAAATACAACTATGCA
GCTCCGCTCACAGCAGCTCTACTCTACCATTTTTGTTTTGATTTAGCTTT
GTATTTTAATGACCAGCCAGGTCATTCATTTGAGGGCCATGCATGTTAGC
CTCCACTGATGCAAGTTACTTAAAAATAAAATAAAATTTGACACCTAGAA
ATTTTAACTTAGAGTAGACATTTGACACATTTCCAATTCAAATTTATTTT
TTATCTTTAATATATCATTTGAACGGTATATACCGTAAGTTGGCCTAATG
NTTTTTATCTTTAATATATTATTTGAACGGTATATACCGTAAGTTGGCCT
AATGTCGACATCCCTCTTCTAATAGACCTTTTTTCAAAGAGGCCACCCTG
TTGAATAATTATGTAGTCCAGCAGAAAAACAATGATAAAACCATGCATAA
TTATTACAATATGCATGATACAGTAATTATGCATGGCTCTATCATTGTTT
CTATGGCTGGACTACATAATTATTCAACAGGAAGTCATCTTTGTTAAAAG
GTCTATTTCGACATCCTTTAGAGATAGGAATAATAGGAAGGTCGGAATCA
CTGATGGACTCCTCAACTGATCGCTTAGCAAAAAAAATAAGTTTCAATAA
GCGATTCCGACCTTCCTATCATTCATATCTTTAAATAAGGATGTCAAAAT
TAGAAGAGGGATGTCGAAATTAGACCAACTTACTGTAACTCATTGAACAT
TATATTTTGTATAATACAATGTGTTGTCTGATCTTATCTATATCAGTGAA
AGGTTTTAAACTGCGTTTTATTCTTATCTTTTCGTTACAGATAATGGATA
CACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACCATATGTC
AGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCCTTGAACT
TGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATGATGATAGAAACT
TTCGGGTTCAAGGTAAATATTAAGGTGGTTTTTTTTCAACTTCAATTGCT
GAATTGAGCTAGAATTAGTATAGTTGACGCTCTCTAATTCGATCTTCAAG
GGGAATTGGATTTGCATCGAATAAGGGAGCGTGGGTTATGAGAGTTTCTT
GTTGACAAGGACTTTAAATTTCATCAAATAAGGGAGCTCTATCAAATAGT
AGAACGTCGAATTAGAGAGTGTCAACATTATATGTATTTCAACTGTATAT
ATACACTTTAGCAAACAGAAACTTGAAAGATCTTCGGAAACTTTGGCCCT
TATTGTATAGGTTTACGCGTTTGATTTTTTAGGAAAGTTTATAAATCATT
AAAAAGTATATACAAAACCTGAAACTGTAACTAATATTTTCACCTTTCAG
TCTTCTTAAACTTGCACTTTAATAGCTGTTTTAAATTTATTATGAATCAA
TAAATTTTTGTCAGTATTTGAAGTTACTGCTCTGCTTCAGTGGTGGCTGA
AGAACTGTTTAATGTGCAAAAATTTTCAAATTTCAAAGATCGATTTTGTA
AGATAGAGCAACAGGCAACATTTTGCCATTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGAATTTTTGGGAAATTTTCAGGAGAGATACATAAAAT
TGTCATTAATATCATGTTCAAATATCTAAAACATTATCTTTAAAGGAAAG
AAAAAAAAATGGCAATGTTTACATTTCTCTAACCTTCCACAGTACTAAAG
TGAGCATTTTTACCTACCGCCTCTACGGTGGAGATGGCGAGACTGTTAAA
TGGTGTATTGTCCAATGATTGAATGAATGTGCAAATTTTCCAATTTTCAA
GTTTGTTTCCGTTTTTTACCGAAAAAGTTCCCGATTTACTGAAAAATTGG
GTTTGCGTGAATTGGAAAAAACGTTTGCGTGATTGCGTGAATTGAGGGTT
CGCTGGGGGAGAAGGCTCATTCACATTGACATTTTGTTAGCAAATACCAA
TTTAAAATTCCGACCAAATTTTTTTTTAATTTTTACTCTTTTCTTAATTA
ATCCCCCTATGAAAGTTTAAAACCCCAAATTTTATCCGTAAAAAAAGTCC
CACCCCTTCCCTAACAAGCCTTTCTCAAAATCATAATTGGAAGGCTTTCT
ATATTTGAAACACATTGTTTTTACATCTTAGGTCGACTGAAGAATGATGA
CATCACAAGAAAATTCGTTCTGAAAATTTTCAATTTTGGATCAGCACCAA
AACTTTCAATGGAGCTAGCTGTTGATCTATTAATACGATGTGGTGAACAA
TGTTCTGATTATTTAAAAGTCTCTACACCAATCAAATCTTTACAAAACGG
TCATTCTACTGAAAATGTTGAATTTATTTCAAGTTTTGATATTCCTGTAC
TTGAATTTGCATCATATAATAATTGCACAAAAGAAGATTTGATTGAAACA
GGGGCACTGAGAGTTGGTACATCAGGAGAAGTGACTTGTCGCCATCATGT
GAGACTACTGACTTATCTTGAAGGAAGAGTTCCTGATTTTTGTAAAGACA
ATCTTACAGACTCTTTCGTTCGACATTGGGGTGCAACTTGTGCAAGAATT
TGTAATGCATTTGAAGTGAGTGATTTATTTATTGCACCACCCGTCTTTTC
TAAACTCCATGTTAGTTATTCCAATGGGGAATATCTTTCGGTCTATGGTA
TCCGAAATAATATGTAGCACTGTCTTTGGTAAAACAAACCCACCTTTATC
AATACTAAAGGCTTAGGGACACGAGAAGTTTTTTTCACGTTGAGGCAATG
CAACATGCTCCATCCCACCAACCTGAAACGCTTTCTCAGGTTTCAACCCC
ATTTTCCATTTAATAACATTTATGCTTCTCTCACTTTTGTCCCAGGGACA
AAATCAACGTGTCTTTTGGGTAAATTTCCCTGCATTGCACCAACGCGAAA
AAAACTTCTCATTTCCCCAAGCCTTAATATATGTAATATAGAAACTTTTC
ACATATTTTTTGTCCTTAGGGAGAAGCAAAATCAGAAGGCGATCGTGGAG
GTTGGATATGGAACCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTAT
TTGAGCACCTGTATCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTAT
TATAAGAGAGTTCGAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAA
AAATGTCATACATACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGT
GCTAATGATAGCATTGATGGAGTATTGGATTTTGATGATATAGCATGGTC
GTTCCCGGTTGTCGATTTGGGTATTTGTATGATGTATTTATCCTTAGCAT
CTCAAGAAGAGGATATATTTCATAATTTGAATCTACTTTATAAAGGATTT
ACATCCACACGTTGTTTAAATGATGTCGAGGATTCGGCATTGTATAATAT
CTGTTTATTACGGTATGCAGAAGTGACTGTCATCTCACTTTATCAACATG
AGTTTGTTGACCCAGATAATGATTATTTGCTTCTCCATACGGCAGATAAT
TTTAAAAGAATAGATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAA
GAGAGTTTGTTCAGAAGATTGAGACAAGTTTCTGTTCCTTTCCTTCTTCA
TTACTTCCCAATACAATAACAACATGTTTGACAACATTGTATTCTATAAT
AAAGGATTAATCTAATACTCTACTGATATCCAATTTTAAAAACACTTCCT
TGCCACAGAACCTGTGGATAATTCTGTTTCCGTTAGGAAATCCCCTAAAC
TTGAGAGAAACAGTACAATGTTGAGAATTATATCACTACCAAATACCAAA
AGGGATTGATCCTTTTAATACACAACCCCTAATCATAAAGCAACAATCAT
CGTATGTTTCTTTTTCTAATTTGATAGTTTTCTTTTCGGATTTTGGTTTG
TACATTTAAATCAAACTGTATTTAAGACTCTTATAATTTTGCTTAGAATT
TTAAAATATGTTAGTGAGAAAGATAATCACGAGAGGAA

Coding sequence (CDS) from alignment at scaffold_86:1029767..1036254-

>TCONS_00073052 ID=TCONS_00073052|Name=TCONS_00073052|organism=Clytia hemisphaerica|type=CDS|length=3618bp|location=Sequence derived from alignment at scaffold_86:1029767..1036254- (Clytia hemisphaerica)
GGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATGGAACCTTGT
GACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCTGTATCAAAG
ATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAGTTCGAAACT
GAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTCATACATACATAA
TGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATAGCATTGATG
GAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCGGTTGTCGATTTG
GGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGAGGATATATT
TCATAATTTGAATCTACTTTATAAAGGATTTACATCCACACGTTGTTTAA
ATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTACGGTATGCA
GAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGACCCAGATAA
TGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAAGAATAGATTATC
TGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGTTCAGAAGAT
TGAGTCGACTGAAGAATGATGACATCACAAGAAAATTCGTTCTGAAAATT
TTCAATTTTGGATCAGCACCAAAACTTTCAATGGAGCTAGCTGTTGATCT
ATTAATACGATGTGGTGAACAATGTTCTGATTATTTAAAAGTCTCTACAC
CAATCAAATCTTTACAAAACGGTCATTCTACTGAAAATGTTGAATTTATT
TCAAGTTTTGATATTCCTGTACTTGAATTTGCATCATATAATAATTGCAC
AAAAGAAGATTTGATTGAAACAGGGGCACTGAGAGTTGGTACATCAGGAG
AAGTGACTTGTCGCCATCATGTGAGACTACTGACTTATCTTGAAGGAAGA
GTTCCTGATTTTTGTAAAGACAATCTTACAGACTCTTTCGTTCGACATTG
GGGTGCAACTTGTGCAAGAATTTGTAATGCATTTGAAATGGATACACAAA
GTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACCATATGTCAGCAAA
GTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCCTTGAACTTGATGA
AAATGTTAAACCAGTGGAAATGGTGTCCTATGATGATAGAAACTTTCGGG
TTCAAGGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGATATGGAA
CCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCACCTGTA
TCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGAGAGTTC
GAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTCATACAT
ACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATGATAGCA
TTGATGGAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCGGTTGTC
GATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGAAGAGGA
TATATTTCATAATTTGAATCTACTTTATAAAGGATTTACATCCACACGTT
GTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTATTACGG
TATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGTTGACCC
AGATAATGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAAGAATAG
ATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTTTGTTCA
GAAGATTGAGTCGACTGAAGAATGATGACATCACAAGAAAATTCGTTCTG
AAAATTTTCAATTTTGGATCAGCACCAAAACTTTCAATGGAGCTAGCTGT
TGATCTATTAATACGATGTGGTGAACAATGTTCTGATTATTTAAAAGTCT
CTACACCAATCAAATCTTTACAAAACGGTCATTCTACTGAAAATGTTGAA
TTTATTTCAAGTTTTGATATTCCTGTACTTGAATTTGCATCATATAATAA
TTGCACAAAAGAAGATTTGATTGAAACAGGGGCACTGAGAGTTGGTACAT
CAGGAGAAGTGACTTGTCGCCATCATGTGAGACTACTGACTTATCTTGAA
GGAAGAGTTCCTGATTTTTGTAAAGACAATCTTACAGACTCTTTCGTTCG
ACATTGGGGTGCAACTTGTGCAAGAATTTGTAATGCATTTGAAATGGATA
CACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACCATATGTC
AGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCCTTGAACT
TGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATGATGATAGAAACT
TTCGGGTTCAAGGGAGAAGCAAAATCAGAAGGCGATCGTGGAGGTTGGAT
ATGGAACCTTGTGACGTGTCCTCAGTATCTTACCGAAGATTATTTGAGCA
CCTGTATCAAAGATCACGAGCAGAGAAAAGTGTTATCTTCTATTATAAGA
GAGTTCGAAACTGAAACGTTACCTCTGCTGAAAAAACATTTAAAAATGTC
ATACATACATAATGATTTGAATGAAGCCAATCTTTTGGTAAGTGCTAATG
ATAGCATTGATGGAGTATTGGATTTTGATGATATAGCATGGTCGTTCCCG
GTTGTCGATTTGGGTATTTGTATGATGTATTTATCCTTAGCATCTCAAGA
AGAGGATATATTTCATAATTTGAATCTACTTTATAAAGGATTTACATCCA
CACGTTGTTTAAATGATGTCGAGGATTCGGCATTGTATAATATCTGTTTA
TTACGGTATGCAGAAGTGACTGTCATCTCACTTTATCAACATGAGTTTGT
TGACCCAGATAATGATTATTTGCTTCTCCATACGGCAGATAATTTTAAAA
GAATAGATTATCTGAGATCGGCAGGTCCAACAATATTTAAAAAGAGAGTT
TGTTCAGAAGATTGAGTCGACTGAAGAATGATGACATCACAAGAAAATTC
GTTCTGAAAATTTTCAATTTTGGATCAGCACCAAAACTTTCAATGGAGCT
AGCTGTTGATCTATTAATACGATGTGGTGAACAATGTTCTGATTATTTAA
AAGTCTCTACACCAATCAAATCTTTACAAAACGGTCATTCTACTGAAAAT
GTTGAATTTATTTCAAGTTTTGATATTCCTGTACTTGAATTTGCATCATA
TAATAATTGCACAAAAGAAGATTTGATTGAAACAGGGGCACTGAGAGTTG
GTACATCAGGAGAAGTGACTTGTCGCCATCATGTGAGACTACTGACTTAT
CTTGAAGGAAGAGTTCCTGATTTTTGTAAAGACAATCTTACAGACTCTTT
CGTTCGACATTGGGGTGCAACTTGTGCAAGAATTTGTAATGCATTTGAAA
TGGATACACAAAGTGTATTCTTGTTGGATGGTGAATTAAGAATTCGACCA
TATGTCAGCAAAGTTCAATTGAAAGAAATTGCATTAAAATGTTTTGGCCT
TGAACTTGATGAAAATGTTAAACCAGTGGAAATGGTGTCCTATGATGATA
GAAACTTTCGGGTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045294XLOC_045294Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073052-proteinTCONS_00073052-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073052-exon-scaffold_86-1575043694:1036053..1036254TCONS_00073052-exon-scaffold_86-1575043694:1036053..1036254Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1575043694:1033093..1033264TCONS_00073052-exon-scaffold_86-1575043694:1033093..1033264Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1575043694:1031190..1031623TCONS_00073052-exon-scaffold_86-1575043694:1031190..1031623Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1575043694:1029767..1030785TCONS_00073052-exon-scaffold_86-1575043694:1029767..1030785Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1510915933:1036053..1036254TCONS_00073052-exon-scaffold_86-1510915933:1036053..1036254Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1510915933:1033093..1033264TCONS_00073052-exon-scaffold_86-1510915933:1033093..1033264Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1510915933:1031190..1031623TCONS_00073052-exon-scaffold_86-1510915933:1031190..1031623Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1510915933:1029767..1030785TCONS_00073052-exon-scaffold_86-1510915933:1029767..1030785Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1491911889:1036053..1036254TCONS_00073052-exon-scaffold_86-1491911889:1036053..1036254Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1491911889:1033093..1033264TCONS_00073052-exon-scaffold_86-1491911889:1033093..1033264Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1491911889:1031190..1031623TCONS_00073052-exon-scaffold_86-1491911889:1031190..1031623Clytia hemisphaericaexon
TCONS_00073052-exon-scaffold_86-1491911889:1029767..1030785TCONS_00073052-exon-scaffold_86-1491911889:1029767..1030785Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1029767..1036254 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.85088	8.14662	2.87991	1.87776	6.11042	4.30486	9.9454	10.229	8.97902	7.19808	8.46388	7.46224	6.95604	7.76912	7.95324	6.86691	8.16438	7.77139	5.66404	5.48891	10.2944	8.40699	8.59821	9.05366	4.13416	5.7278	3.93867	3.0411	4.259	4.68639
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002575Aminoglycoside_PTrfase
IPR011009Kinase-like_dom
Blast
[Close]
BLAST of TCONS_00073052 vs. Swiss-Prot (Human)
Match: HYKK (Hydroxylysine kinase OS=Homo sapiens GN=HYKK PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.969e-21
Identity = 96/385 (24.94%), Postives = 164/385 (42.60%), Query Frame = 2 
Query:  251 RPYVSKVQLKEIALKCFGLELDENVKPVEMVSYDDRNFRVQGRLKNDDITRKFVLKIFNFGSAPKLSMELAVDLLIRCGEQCSDYLKVSTPIKSLQNGHSTENVEFISSFDIPVLEFASYNNCTKEDLIETGALRVGTSGEVTCRHHVRLLTYLEGRVPDFCKDNLTDSFVRHWGATCARI---CNAFEGEAKSEGDRGGWIWNLVTCPQYLTEDYLSTCIKDHEQRKVLSSIIREFETETLPLLKKHLKMSYIHNDLNEANLLVSANDS--------IDGVLDFDDIAWSFPVVDLGICMMYLSLASQEEDIFHNLNLLYKGFTSTRCLNDVEDSALYNICLLRYAEVTVISLYQHEFVDPDNDYLLLHTADNFKRIDYLRSAG 1372
            +P  S+ Q   +    FGL++ + V+P  + SYDD+NF V    K  D   ++VLKI N  ++                 +  D ++V   I           + F+ +   P          TK D   T +L    SG     + VRLLTYL GR     +  ++   +   G   A++      F     S   R  +IWNL   P  L E YL   +  +  R+++  +I  F+ E +  L  H +    H DLN+ N+L+ ++ S        + G+LDF D+++ + V ++ I +MY+ + S+          +  GF S   L  VE  AL+ +   R+ +  V++ Y  +    + DYL++     +K +  +   G
Sbjct:   14 KPTFSEEQASALVESVFGLKVSK-VRP--LPSYDDQNFHVYVS-KTKDGPTEYVLKISNTKAS-----------------KNPDLIEVQNHI-----------IMFLKAAGFPTASVCH----TKGD--NTASLVSVDSGSEIKSYLVRLLTYLPGR--PIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKNVP--LLEKYL-YALGQNRNREIVEHVIHLFKEEVMTKLS-HFRECINHGDLNDHNILIESSKSASGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSP--IQVGGHVLAGFESITPLTAVEKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMG 352
The following BLAST results are available for this feature:
BLAST of TCONS_00073052 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HYKK9.969e-2124.94Hydroxylysine kinase OS=Homo sapiens GN=HYKK PE=1 ... [more]
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