TCONS_00073054 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073054
Unique NameTCONS_00073054
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073054 ID=TCONS_00073054|Name=TCONS_00073054|organism=Clytia hemisphaerica|type=transcript|length=2578bp
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTA
GCTGGAAAAGATCCAATTTTGGGCAAAGATGTGAAACTTAGTCCTCAACA
ATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAG
AAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAAC
TCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCAT
CCCTTACGTCATTGACTGCTCACTCGAGAACCTTCCCGATGCAGTCGACT
CCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTT
GTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCA
CTGCTGGGGAAACGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTT
ACGGATGTGAATATCAACACGTCATGACTCACGAAATTGGTCACGTTGTT
GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT
TCACTGGGAAAATATTGGTCAATTCAAGAGTGCTTTCGATATTGTCAAGA
ACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTATGCACTAC
CCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTCCAAAACA
AGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTCGATGCTA
AGCAAACTTCATTGATGTACAACTGCCCAGCCATCGAAAAACAACGCAAA
GCAGCTGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAG
TGAATGTGTCGATAAAAACCAATATTGTAAAGATTGGGCCAAAGCTGGTC
ATTGTTCAAAATCTTCATACACACGTGAACACTGTAAATTATCATGTGGT
TCACCAACCGCATGTCAAGGATCTGACTGTATCGACAAATACGCAGATTG
TCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACTGTTGCCA
GGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGGTCTCCACCAACC
CAACCACCAACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGT
TACCAAAGCACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGC
CAAAGCCAAATGGAAAATTCCTAGGAACAGGTATCTTGTGCATCGACACA
CACAACAAGTGTGGCGAATGGGCTCAACAAGGAGAATGCAAAGCCAACCC
TGGATGGATGTTACGTAACTGTATGAAATCTTGCAACGTCAAAACTTGCG
ATAAAGGAATCCAAAAACCTCAAGGACAATGTGCTAATCCCCTTGGTTTG
GCCATGGACGAGCGTGGTCAATACAAAATCCCAGATAGCGCTTTTTCAGC
ACCTACTGGATGGTTGGCTCCAGgaGCTGGATGGGAAGCTTCCGCCTCAA
ACGCCCGTCTCTACATGGGTGACGATTATGATAAAAAACGTATTGGTGCA
TTCTGCTCCGCCTCACACGATGCCGCCAAACAAGCCAATGGATACGTTCA
AGTTGACTTGGGAAAACAAAATACCATCCGATACATCGCTACACAAGGTC
GTGACAAATATTTTGAGagaatcgagaaattcaagatcTCATACAGTAAT
GATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGACAAGATAAGCT
TTTCGACGGTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCA
CGCCCATCAAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTAC
CCATGTCTCCGTATGGAATTGTACGGTTGttaagaaaaattatgaaaaat
tatgaaaaacattgaaacaTAGAATTATTGTAGAAATCAAACGTGAAATA
TAAATCTTATTTTTCTCGAAGTAataccattttttgaattttttttgact
ttgaaagAGATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCA
ATATCTTTAGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCC
CTGGTCAATTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGA
AACAGCAAGACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATT
ATATATAGTTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACAT
ATGTTTCTCAAATTAAATTAactagattttgaaaaagattagGTCGACCC
TGTGTATTTCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATG
CCAGAAAGAAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCA
AATTAAAGGTCTTTGGTTTTGAATATTGTGTTTAAGTCCCaaggggctag
agaggaatcccCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCG
CCGCATTACCATTAGGAATGACGGCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:1090236..1102305-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073054 ID=TCONS_00073054|Name=TCONS_00073054|organism=Clytia hemisphaerica|type=transcript|length=12070bp|location=Sequence derived from alignment at scaffold_86:1090236..1102305- (Clytia hemisphaerica)
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTT
GAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGC
GGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATT
TAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTTTTCC
CTAAAAAGACCAATTTATAGGTGATTTTCTAAACCATGAGAATATTTCGT
GCTTCACTGAATTCAATTTCGCAGATTTCTCGATAAACCACGAAATTAAA
TTCCACAAAAATTTATTCCGCGAAAATCCAGTGGGGATGGGTTTGAAGTG
CAATTTTTGAATATTGAATGGAACCCACCAAGTCAAGAAATTCATGAAAC
AAATCAAGTCAGATTTTGAAGTTACTAATACATTGCTTCTCTGTTCAATT
ATAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTAG
CTGGAAAAGATCCAATTTTGGGCAAAGGTAAGCAATCTACTTCCCAAAAA
AGAGGTTCTAAAAGTTACAAAGGTTTGACTCAAAATCAAGGTTTAAAAGG
CTTTTGAATAATTAAAGGAAGGGCTTAACTTTTGATCAAACGCTTTCTTT
TAGAGACATGGCATTTGGTAGAGTACTAAACTAGGGGCTAAACTGTGCTT
TCATTTTTTAATGGAGATGAAACAGCAGACTTGCCTTAGTAATATTCTAC
AGACAGAAGCTAAATTGATCGAACCCTGTCTTCAACAATCACAGGCTAAG
CTTCGGTTTCATAAATTAAAACAATCACACGAAAATTTCAAAATCTATTA
TTTTCCTTACAGATGTGAAACTTAGTCCTCAACAATTGCCCGGTAAACTT
TACTNCACGAAAATCAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATT
GGTTTAATCTTTTTGAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAG
GAACAAATTTTTGCGGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGA
AGTTTCGCAAAATTTAATATCGCGGTTAAGAGGATATTTTGTATAAAATA
AGACCTATTCTTCCCTAAAAAGATTAATTAGATCAATTTATAGGTGATTT
TCTAAACCATGAGAATATTTCGTGCTTCACGGAATTCAATTTCGCAGATT
TCTCGATAAACCACGAAAGTAAATTCCACAAAAATTTATTCCGCGAAAAT
CCAGTGGGGATGGGTTTGAAGTGCAATTTTTGAATATTGAATGGAACCCA
CCAAGTCAAGAAATTCATGAAACAAATCAAGTCAGATTTTGAAGTTACTA
ATACATTGCTTCTCTGTTCAATTATAGATGAAGTTGGTCATTTTAATTGC
TGCATTTATTCAACTTTCCTTAGCTGGAAAAGATCCAATTTTGGGCAAAG
GTAAGCAATCTACTTCCCAAAAAAGAGGTTCTAAAAGTTACAAAGGTTTG
ACTCAAAATCAAGGTTTAAAAGGCTTTTGAATAATTAAAGGAAGGGCTTA
ACTTTTGATCAAACGCTTTCTTTTAGAGACATGGCATTTGGTAGAGTACT
AAACTAGGGGCTAAACTGTGCTTTCATTTTTTAATGGAGATGAAATAGCA
GACTTGCCTTAGTAATATTCTACAGACAGGATAAATTGATCAAACCCTGT
CCTCAACAATCACAGGCTAAGCTTCGGTTTCATAAATTAAAACAATCACA
CGAAAATTTCAAAATCTATTATTTTCCTTACAGATGTGAAACTTAGTCCT
CAACAATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAA
ACAAGAAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATG
ATAACTCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCT
GTCATCCCTTACGTCATTGACTGCTCACTCGGTAAGATAATATTTTAATG
TTTCATCTACTTCCTTCAAACCAACTTATTTCCGAAAAGGAGTGTTGAAC
CAATGACACTTAATAATTCTTTAATGATTCCCCTTTAAGAAAGTAAAAAG
ATTCAAACTTACAGTGTGCATCTTTTCCAGGGTTTTAGCAGGTTTCCCAA
TCCACAGTACTTTTGAAAGAATTCCCTCGTTGGTTGTATTAGCCTCCTCA
ATGATTACCTGAAGTAGCAAAATACAGATAATTTGACTACCGGGTGTCCC
AGAAAAAAATTCCGCTCTTTGAAGTGAATGTTCTCGAATTCTATGAATTT
CTAAACAATCAATCCTTTTGCATTGGAAAGAAGGAGGATAAACTTAAATT
TTGAGGGGTCATTTATTAAATTTGGTCAACTGGATCAAAAGTTAAGCCAT
AATGAATGAAAAATTATTTTTTTGTAATTGCTCAAAAACGTTGAAAATCG
ACCTATCGAATTGTGATAGAAGCATGATTGCATGGAGCATGATTTTCATT
GTTGAAGTAATAAAAACCTAATAAAAGTATCTTTTTATGAAAAAAGAAGT
AAAATTTTAAGTGAAACAAAGAAATTTATCTAAAAATCTGAAAAGTTTGA
TAATTCCAACGGATAATTCACTTCAATGGCTACACTGATGAAATCAACGC
TACTTTTGACTTTCCGGGTGCATAGGCCAAAACTTGAAGCTAAACTCCAT
AGAAAATAATTTGAAATGACCCAAATGAAAATCTTTAGCCCTTTAGAAAT
TATTTCAAGCATTTTTTGTTTTCGTGTCCACTTTAAACTCTTTATTCCTG
CAAAAAAGTAATAATTAGGTTATAAAATTTGATGGGTCGATTTTCAACTT
TTTCGAGCATTTTCAAATAATGAAACTTTTATTCATTTCAGCATAATATT
TTATCTAGTTGACCAAATTTGATAAATGACCCCTCATAATTTAAGTTTAT
CCTTCCTCTTTCCAATGCAAAAAAGATTGATCATTTAAAAGTTCATAGAA
CTCGAGAAAATTCACTTCAAAAAGTGGAACTTTTTTCTGGGACACCCGGT
ATTTTATACTGATATATACCAGGATCTACCTAGCTCTACTTAGAGAGTTC
ACTTCACCAACGTCAAAAGAACCAACCAGCCAGCGGAGTCCCTGATGGCA
CACCAAAATGAAATTCTAATTACGCCAACCCGCCAAAAATATTCTGCCAT
CACGTCATTACACCGAAAAAAGTCTCCTATTAATCACGTATAACGCTTTT
TGAAATTATTCATCACGCCATCACGCTAAAAAAGGCCGAATAAAACCATT
GCGAAAACCGCTTGGAGGTTTCTAAAAGGTAGCAAAAGTACAGCTCAAGA
AAAAGGGTTTTGAAAAAGTGAGATTATACTGTAATAGCTGGGCTATATCA
CAAGATTCTATCTTTCTTTTTTTTACCAGAGAACCTTCCCGATGCAGTCG
ACTCCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGT
TTTGTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATAC
CCAGTAAGTCTTTTTGCTAAACACCCATGTCTTACAGCTCCGGTGGAACT
TTTTACCTCAGTATGGCGATAAACCCAATGTGGATAGAAATTCTATTGTT
CCAAGGTTAAAAAATCCAGTGGGGATGGTTTTGAAGTGCAATTTTTGAAT
ATTGAATGTCGAATGGGGATAAATCAAAGTCAATTTCCAAGTGGGGCTGA
AATTTCAGGATATATTCCCACCGGTGACGAAATTTTAAAAAACCCGTCCC
AGCGGGTCTGTGACACAGGGGTGTGCTTAAGTCTTCATTTTAGATAATAC
ACCTATCAAAAACGAGAAAAGGCGTTAGAGTTTACCAGGGAGACATTACG
TTAAAAAGTCCATATCTGCCAGAGCATCAATTCTTAATGACATGACATTC
TGCTTCAACTCGTCTTGGTAACCTAAAGATCGCTTTCCTCACGCTAGTGT
TTTTGCAGTCAGATGCAGCAACGATAGATGTTGGAGAGTGGGTTAAAAAC
CTCCAAAAACTAAAGATTTTGGTANACGCTAGTGTTTTTGCAGTCAGATG
CAGCAACGATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAAACTAAAG
GTTTTGGTAGAGACACAGCTCATTTTGAATTCAGGTTACCAACTAAAAGG
CAACTTCAACTACTTCGTAGTCTAAGGGTTATATCTAAACTACTAAGGCG
TCTTCTTTCAGTACATTGAAACGATTATTCATTTATAGCTGCTGGGGAAA
CGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTTACGGATGTGAAT
ATCAACACGTCATGACTCACGAAATTGGTCACGTTGTAAGTTTTATTGAG
CAGATTTTCTTCGTTGTGCCGACAGACCTTTTTGTTTTCCAGTAACCCAT
AGACATAGATTAGTAATATACAACATGGTATCTCTTTCGAAATTATTCGA
AGAGCTAGCAGCAAACTTTTTTTTACGTTTTCAATTTCTTATGATTTCAA
ATGGGCTATTCCAGAAATAAGTACTTACCCTTACAATACATTTATCAAAA
GTCCACCCTTACAGTGCATTTCTGCTATTTTCAAAAACATACCCTTAATC
GACGCACACATACCCGTCGGTCAATCTTTCTAACTCCACTCCGTGTTTCA
ACGTCAACATTTCTAGTACCGATCAACTCTTATCATCGTTTGATAGATGT
TTTTTTTACGTTGCAATAATAGTCTCTCACTGAAAGGGTTAACCCTTTCC
GGACGCACGGGCCACTGGGTGGCCCATGAATCGTGTTCCTATATGACGCA
GGGGCCACCGGGTGGCCCATAGCTTTGTAAAAGATTTTAACCGTTTTCGC
GCCAAAATACAATAACATGGTTTTGAATAATGATTTTGAGATAAATTTCC
CGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCCTTTTACT
CTATTTCTTTATTCAAAGTCAAAAATTTTGCCTTTCCGAAAAAAAATCTG
CCGATTTTTCGGTCACGTGACCAGGTGTCAGCCATATTTAAAATTATTTT
TTTGGTTTTTCAAAACCCCTTTTACATGTGAAAAAAACGAGGTATTACTT
ATCGTGATATCTTTTATCAATCACTTTCTATTGCAATTTTAGTGAAGCCA
GTCAAAAATCAAATTTTTGTTTGCGTCATATAGCCGTGAAATCATGCGTC
CGGAAAGGGTTAAGAAAAGACAGGTAATTTCTAATGTTTGTGCTTTGTGC
TAGCGTACCACCAGTTAACGTGATAAAGCCTGAGATTCATTGGGTTGAGA
TTCCTACTGTAGGCAGGTTTATGAAATACACATGATTTGTTTTCCTCCGT
AAACACAGTCTCGAATCTCATTAGTTTTCATAACTGAATGGTTTACTCAG
AAATGGTTTTCAACCGTATTGCCTGTAGGCAAATACTAGTTTTCATATTT
TCTAGGTTGGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATAC
GTCACAGTTCACTGGGAAAATATTGTAAGTTTTTTTCGAGAAAATGTTTA
CCTAACGTCACAATTTCTAGCTACGATCATCTCGAGAGAACTTAATTCTT
AGAAAGTCCTAGCAACAGAGCTAAAAAACACAATAATTTCTGTTAGTGAG
TGTCCTCTTAAGCAATTTTTGCAAAAGCGACACCATTGCAATCTTTCAAA
AGCTTTAAAAAACAATAGCAGTGGCGTCAAATCATCAAAGAAGTACAGTA
CAAGCCATGAATGTCTAGTATAACGTTTAGCTGTAAGATAGGGTTTTATT
CCAGATAGAAACATAAAAGTTTTCGGAGTTACTCAAAAAAGTAAAAAAAT
ATTGTTTGATAGAATGTCCCATTATATTCCATCCATATCTTTAAAGTTCA
TTGCAAACGAATTTTTTATCTTGAATTCCAGGGTCAATTCAAGAGTGCTT
TCGATATTGTCAAGAACACAGACTCCCTTGGTGTCCCATACGATTACGAA
AGTATTATGCACTACCCATGGAACGCTTTCTCTGCCAATGGCCGAAATAC
CATGACTCCAAAACAAGATACACGTGGACAGACCCCATATGTAGCCTTGA
GTGACCTCGATGCTAAGCAAACTTCATTGATGTACAACTGCCCAGGTGAG
ATTTTCAACATTTACTTAATTTAATTATATTGCCTGCTAACGTTAAAGGG
TATATTACGTACACGTCATTAAGCTATAATTGGTAAGCTTTTTCTAGACT
CTCAATGATACAACATAGAAGTAGAGAATAAACTTGCAGGCCCGGTGGAA
GCGGGGAGACTTGAGCCTACCCAACTTTGAGCAAATGACATTTTTTTATC
AAATTCCAAGCGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTT
TACGGTTGTTCCACCGGGCCTGACTTGTGTATCAGTAAAGCAATTATCTC
GATCGGAGAACCAAACCCATTTTGGGAATTTGCCCTCTTCTGGAAACGAA
GTAGTTCATTTTTCTTGACATTTATACATTTGACGCAATCACGCAAATAT
ACGTTCCAAAGAGATATTTTTGCCTTCAATTTTCCCGTGGTCAGTATATA
CTGTATCAGAAACCTTTGCAGATAAAAATATCTTTTAAGAGAAGTCTGAT
ACAGGACCGTTTCTTGATCGAAGTATTTTACTTTACGCTGTACAAAAGTC
ACCATAGCAAAATATTTTACCAAAACGCAAAAGAAGACTTGTTACAATCA
AAAATTTATTTCGATTCTATTTCAGCCATCGAAAAACAACGCAAAGCAGC
TGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAGTGGTA
AGCGATTGACAGATTATCTAAAGTGAAATCTATTCATTCACTCAAATCTT
CTGTCAAGTCCCAGTTGGCCATTGAAACTGTGACAACCATTGAAAGACTG
TATACCATTCTAATAAAATATTTCTAACAATCTAATCCAAGGCCATAAGA
GGTCCGAAAAAGAAAGCGCAGAGAAATTTCTGGAATACCTCAATACAAAT
TTATCAAACCACAATTTATTTGTGTTGTTTTAGAATGTGTCGATAAAAAC
CAATATTGTAAAGATTGGGCCAAAGCTGGTCATTGTTCAAAATCTTCATA
CACACGTGAACACTGTAAATTATCATGTGGTTCACCAACCGCATGTCAAG
GTAAACATACAATCGAGTTTCAAAATTTCCATGTGCAAATCCTTTTGAAC
TAATCATTAGTCCCTTCAAAGAATCTCAAAAACAAAAACCTGAATCTCAC
AACCATTTCAATATAAAATTAGACTTTCCGTTGAGGTTTAAAATTAGAGA
AACACAAATGCACCATATACATACGCAAACACCACATTGCATTGTTTTCT
GACATTGCATCATGGATCAAACAGCTGATTTGTTGCAATTAACGTATTGT
CTGATTTTACGTCACTCATAGCCAATCAGCTGTTGGATTTGTGATTTAAT
GCCAAAAGTTATTGCAAAGGTGCATATCAAGAATAGATGACGATCAGGGA
AATAATTAGAAATAAAGAAATTAATGCTAAAAGAGTACCTTGTGTGCGAT
TCACTTTTTAAACCATTTGTTCTCTCTCTCATAGGATCTGACTGTATCGA
CAAATACGCAGATTGTCCAGCATGGAAAGACTGGGGACATTGTCATTTGA
ACCCCACTGTTGCCAGGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAA
GGTAAGCGTTCATACAGGTTCATAAGATAATTCATGATATTCATTACGTA
ATGTTATAAACAGAGGTACCTAAAACGACCGAGTGTTTGCAACTGATTTT
CACTTTAAACAATAAGACTGGTGGTAAACGTCCGGGCTATTTTGAGTGCT
TCCGTATGAAACATTCACGTCTTGAATACCATGAATTTAATTTATAGTCC
ATTCACTATCATCTGGATAACCGTTAACGACTTTTAAGTAAAAACTTTTC
TTTTCACAATCAAAACAAATAATTTGAAGAACTTTATTCACATGGTAGTG
GACTGAATGAAATTATCTGACAGTATCTGTTAGAAATGTGAAGATATTTA
TTGTTTGAAGATCAACTTTGGCTAAAAGCAAACTGGCTTCGTTTTGGTGT
GATGTGTCTGTATGTAATAGAAATGCCAGTACTAAAACGACTGGAAAAGA
AAAGCTTAGAAAACTCTGAATAATCTAAGCAATAACAAATATCATAACGA
ATTACCTCGACCCTTTTACAATCATAGGGTCTCCACCAACCCAACCACCA
ACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGTTACCAAAGC
ACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGCCAAAGCCAA
ATGGAAAATTCCTAGGAACAGGTAAAGTTTTTGTCAGAGTAATGCATTTA
ACCTTTTAGCGAGTCAACCCTTTTTTAAATGGCCAAAAAGACGAGCTTAA
AAAAACTTAAAAAGTTAAATTTGAAGAGACTCATATTCATGATATCCACC
ATTGTAATGTCTTCCACGGACTCAACAGCTGATGTGATTGGTTGTAAGTA
GCGTATTGACTGATTTTACGTCACTTAAAACCAATCAGGTGCTGGGTCCG
TGATGTAATGTCAGAAGACATTGTAATGGTGCATATCATGAATATGTGAG
CTCAAGTATCATAAACTGATAAGATTCCTGCAACTTCTTTTACAGAAAGC
AATAGACTCTAGAAGCAAAGCTGTTTACCTTTCTCATTCTCATTGGTAAT
TTCAGGTATCTTGTGCATCGACACACACAACAAGTGTGGCGAATGGGCTC
AACAAGGAGAATGCAAAGCCAACCCTGGATGGATGTTACGTAACTGTATG
AAATCTTGCAACGTCAAAACTTGCGATAAAGGAATCCAAAAACCTCAAGG
ACAATGTGCTAATCCCCTTGGTTTGGCCATGGACGAGCGTGGTCAATACA
AAATCCCAGATAGCGCTTTTTCAGCACCTACTGGATGGTTGGCTCCAGGT
TAGTGAATGGGCTTTTCCAGAAAACATTTTTACTCCGCTCACTGTTTGAG
AATATTGATTTTTCGAAGTATTGAACCCCCTGGATATCCTCTCTTATAAA
GATGCTTACCCCTAGATATCGTATTTTTTAACTTGAAAATACACTTTACC
CCCTTACTCCCTTGTAGATATTTAACCCTCTGAATATCCACTTTTGAAAA
GAAATCGTTAACCCCCTGGTTATCCGACATCCTCAACAGGGGGCGACACG
GAAATTTTCTGGAAAAGGCCAATCTTTCGTTTAGAATATCCAAGAGGCTA
TTGACAGTATCTGTTAGAAGTTGCAGCACATTGGCGATATATTCAAGAGG
CTTTGGAATGCCTTTAAGCCTGAATGGGAGTATAAGAATATATTAGACGT
GATTTTGGTTTAAAAAACCAACTATAGAGACGAAAACAGATCCCTGTAAT
TCTTTAATGTAAAATAACAAGCTGATAATTCAATCCTCGTGATTTCACGA
GTCAAAGTCAATCAATATCAACAAAAATTCAAACTCGTCAAAAATGATAA
CCTTTGCTAATCTCAACAAAAGACTTACCAACATTTTTCAATTTTTCTTT
TTTCTAGGAGCTGGATGGGAAGCTTCCGCCTCAAACGCCCGTCTCTACAT
GGGTGACGATTATGATAAAAAACGTATTGGTGCATTCTGCTCCGCCTCAC
ACGATGCCGCCAAACAAGCCAATGGATACGTTCAAGTTGACTTGGGAAAA
CAAAATACCATCCGATACATCGCTACACAAGGTAAGCTTTTTTTGATAAC
ACCTTAAACGGTAACAGAAAGAAAACTGGTAAATTCGAGATAAGTCTAAA
ATACTAATTCAGTTGACACACTGTTTTTCACAACATCCATGAACGTTAGA
TGAACGTTGAATGAAACAGCGTTGTGTGCCAGCTGGATTACAAGGTGTTA
TGGGGAGCCAGCATGTAGTACACCCCCTTCTCACAGACCCACTGGATAAA
TTGACCAAAATATTGTCTCCGGTTGAAAATTGTCATCCGATTTTCGTCTC
ACTGAAAATAACCAAATAAACCAATCCTCGCTACAAAATATTTACTATTT
TTCCAGTCCCCAATGAATTTTCTAACTTGAAAACAAAAGAATATCGATCA
CCATCCATAAAAAATATGAGAAAACCGATCCCCATCGAGTTTCAGCCCGT
TATTTTTATCCCCATTGGCTAAAAAAATCCTACTAGGTCTGTGAGAAGGG
TAGTATGACAACATAGTACAGAAGAGCAATCTCCAATATACTAAAATATT
TACTTTGATTGATATTGATGGATAGATTAAACTGTTATTGATCAATGTTT
CTTCACCACATCCAGGTCGTGACAAATATTTTGAGAGAATCGAGAAATTC
AAGATCTCATACAGTAATGATGGAAGCAACTTCCAAATGTACCAAGATGG
AACCGGACAAGATAAGGTATGATAGAAATCTTTCAAACTAATCTTGAATA
ATCTAAATAAGCTTGAGTTTATCGACCCAGTGATATTTAGAATTTCTAAG
TAGCAATGAACTGACCAAACCAGATTCTGAAGTTTATTTCGAGATCAAGT
TACCAAGAATAATCATTGTTTTATATCCGCCAAAAACAAAAAGACATATT
TCGATAAAATTTCAAATGATTTCTTAATTTCGAAATAAAAGATGGATATG
TTTTTCTCTAACCTTTTATCTATATTTTCATCTTCTTTAGCTTTTCGACG
GTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCACGCCCATC
AAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTACCCATGTCT
CCGTATGGAATTGTACGGTTGTTAAGAAAAATTATGAAAAATTATGAAAA
ACATTGAAACATAGAATTATTGTAGAAATCAAACGTGAAATATAAATCTT
ATTTTTCTCGAAGTAATACCATTTTTTGAATTTTTTTTGACTTTGAAAGA
GATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCAATATCTTT
AGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCCCTGGTCAA
TTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGAAACAGCAA
GACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATTATATATAG
TTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACATATGTTTCT
CAAATTAAATTAACTAGATTTTGAAAAAGATTAGGTCGACCCTGTGTATT
TCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATGCCAGAAAG
AAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCAAATTAAAG
GTCTTTGGTTTTGAATATTGTGTTTAAGTCCCAAGGGGCTAGAGAGGAAT
CCCCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCGCCGCATTA
CCATTAGGAATGACGGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045295XLOC_045295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073054-exon-scaffold_86-1575043694:1102251..1102305TCONS_00073054-exon-scaffold_86-1575043694:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1100806..1100878TCONS_00073054-exon-scaffold_86-1575043694:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1100275..1100472TCONS_00073054-exon-scaffold_86-1575043694:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1098703..1098826TCONS_00073054-exon-scaffold_86-1575043694:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1097871..1097967TCONS_00073054-exon-scaffold_86-1575043694:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1096282..1096350TCONS_00073054-exon-scaffold_86-1575043694:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1095661..1095874TCONS_00073054-exon-scaffold_86-1575043694:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094959..1095030TCONS_00073054-exon-scaffold_86-1575043694:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094606..1094722TCONS_00073054-exon-scaffold_86-1575043694:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094055..1094171TCONS_00073054-exon-scaffold_86-1575043694:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1093385..1093528TCONS_00073054-exon-scaffold_86-1575043694:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1092758..1093000TCONS_00073054-exon-scaffold_86-1575043694:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1091975..1092148TCONS_00073054-exon-scaffold_86-1575043694:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1091290..1091390TCONS_00073054-exon-scaffold_86-1575043694:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1090236..1091015TCONS_00073054-exon-scaffold_86-1575043694:1090236..1091015Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1102251..1102305TCONS_00073054-exon-scaffold_86-1510915933:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1100806..1100878TCONS_00073054-exon-scaffold_86-1510915933:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1100275..1100472TCONS_00073054-exon-scaffold_86-1510915933:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1098703..1098826TCONS_00073054-exon-scaffold_86-1510915933:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1097871..1097967TCONS_00073054-exon-scaffold_86-1510915933:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1096282..1096350TCONS_00073054-exon-scaffold_86-1510915933:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1095661..1095874TCONS_00073054-exon-scaffold_86-1510915933:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094959..1095030TCONS_00073054-exon-scaffold_86-1510915933:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094606..1094722TCONS_00073054-exon-scaffold_86-1510915933:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094055..1094171TCONS_00073054-exon-scaffold_86-1510915933:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1093385..1093528TCONS_00073054-exon-scaffold_86-1510915933:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1092758..1093000TCONS_00073054-exon-scaffold_86-1510915933:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1091975..1092148TCONS_00073054-exon-scaffold_86-1510915933:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1091290..1091390TCONS_00073054-exon-scaffold_86-1510915933:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1090236..1091015TCONS_00073054-exon-scaffold_86-1510915933:1090236..1091015Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1102251..1102305TCONS_00073054-exon-scaffold_86-1491911889:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1100806..1100878TCONS_00073054-exon-scaffold_86-1491911889:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1100275..1100472TCONS_00073054-exon-scaffold_86-1491911889:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1098703..1098826TCONS_00073054-exon-scaffold_86-1491911889:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1097871..1097967TCONS_00073054-exon-scaffold_86-1491911889:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1096282..1096350TCONS_00073054-exon-scaffold_86-1491911889:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1095661..1095874TCONS_00073054-exon-scaffold_86-1491911889:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094959..1095030TCONS_00073054-exon-scaffold_86-1491911889:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094606..1094722TCONS_00073054-exon-scaffold_86-1491911889:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094055..1094171TCONS_00073054-exon-scaffold_86-1491911889:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1093385..1093528TCONS_00073054-exon-scaffold_86-1491911889:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1092758..1093000TCONS_00073054-exon-scaffold_86-1491911889:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1091975..1092148TCONS_00073054-exon-scaffold_86-1491911889:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1091290..1091390TCONS_00073054-exon-scaffold_86-1491911889:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1090236..1091015TCONS_00073054-exon-scaffold_86-1491911889:1090236..1091015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1090236..1102305 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0019546	0.00526675	0.00191844	0.00188187	0.000846274	0.000569072	0.00748962	0.00222655	0.00189402	0.00137529	0.00396081	0.00618436	2.86377	0.786348	11.844	47.462	12.6293	4.88398	34.2304	32.6813	26.8203	45.7904	52.5839	68.3649	64.4088	70.585	0.00698609	0.00598779	0.018468	0.0875756
Blast
[Close]
BLAST of TCONS_00073054 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.713e-29
Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 2 
Query:  284 WTNAVIPYVIDCSLENLPDAVDSIKRAMAEWEAKTCIRFVKHTNEKYKLTF-FRDTHCWGNVGMVSYS--RISVGYGCEYQHVMTHEIGHVVGFYHEQNRKDRDQYVTVHWENIGQFKSAFDIVK----NTDSLGVPYDYESIMHYPWNAFSAN-GRNTMTPKQDTRGQTPYVA----LSDLDAKQTSLMYNCPA 832
            W   VIPYVI  +      A+   K+AM  WE  TC+ F++ T+E+  + F +R   C   VG        IS+G  C+   ++ HE+GHVVGF+HE  R DRDQ+VT+  ENI Q    ++ +K       SLG  YD++SIMHY  N FS     +T+ P+QD  G  P +     LS  D  Q   +Y CPA
Sbjct:  159 WPGGVIPYVIGGNFTGSQRAI--FKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENI-QPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPA 350
The following BLAST results are available for this feature:
BLAST of TCONS_00073054 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL27.713e-2938.97Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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