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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073162 ID=TCONS_00073162|Name=TCONS_00073162|organism=Clytia hemisphaerica|type=transcript|length=377bp
taaaaaaatttaacattatGCTCTTGAATTTATTTTAACAGGAAAGGAAA
TAGACAAATAATGCCTCGGTTGAACACTAGAGACTTGCTGAAGATTGTCT
TTGTAGTATTTGCAACGAAAGTGATGTATCACCTAGTCTTTTATTCGAAC
GCCGAACCAAAAGTGTTAACCAATAGACGTGACACAGTTGTTGCCGTTAT
TGAAGAAGAACAGAGGGTGCAAATCTCActtccaaagaaaaaaaaaatga
aagaaagtattaaacaaaactttaaaaatccAAACGAGCAAAAATTGATG
CTGTCAACAACTAAGAAAGTCAATGTGAAAATGGCTAAAACACCGAAAGC
TTCAATTACAACGACAACGACAACGAC Run BLAST on NCBI transcript from alignment at scaffold_87:48740..50590+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073162 ID=TCONS_00073162|Name=TCONS_00073162|organism=Clytia hemisphaerica|type=transcript|length=1851bp|location=Sequence derived from alignment at scaffold_87:48740..50590+ (Clytia hemisphaerica)
taaaaaaatttaacattatGCTCTTGAATTTATTTTAACAGGAAAGGAAA
TAGACAAATAATGCCTCGGTTGAACACTAGAGACTTGCTGAAGATTGTCT
TTGTAGTATTTGCAACGAAAGTGATGTATCACCTAGTCTTTTATTCGAAC
GCCGGTAAGTTGGAATTTGTGTTTTAAGGCCTGTCTCCACTTatgcgcgc
tgcgatcgcaccgttttgcttcaatcatttttccttagaaaaaaaaagat
tacatTAGAAAAATGAAGCTCGCGCTCGAAAAAGAAGTTGAATACATTTC
CACTTTTTTCAACCATTACgccagatcgcgccaatggaaaagcttaattt
tttttaccaataGCGTAGAAGCTTTGCCAGATAAAGTGCGATCGCGGCGc
ggcgcaagtggagaccggtgTTTATGCTTTTACAGTGAAGTCTCTATTGA
TTTTTATAGCTCGAGTAAGTTGCCTGGAACCCTTAAGTTAACaatcacac
ccccttctcacagacccactgggacccttcccactggaaaaattagccaa
aatatcatcccctccaatttttgtccccattaaaataatcaaataaacca
atccttaatgcaaaatatttactatctTTCCCATCTCCAATGaatgaaaa
atcctaccggaaCTGTGCAATCCTGTATAGAATATGCAGCTGATATTCTC
CGGTCAACTCTCCAAGCCTGTTGGACCATGAAGGGACCCATGAATTTacc
gatttttttcaaaaagtcttaATGTTCTCGATTTTGATGAAATGTAAATT
AAATTGTAACATCATTTGCAATTTCGCTTGTTATATTGATTANTTGATTT
AGATGAAATCTAAATCAGATTATAACATCATTTGCAATTTCGCTTGTTAT
ATTGGTTGCTTGCTGCAaagcataggcgtagcgagataccctgcaaaatt
tacggatgagagcggtttttacgacactgttattgtctttgttttatcaa
aaggtAATAAATATGTCATAAACTTCTGCACTCCCTTGTAagttttgcag
ggtatctcgctacgcctatgccAAGCAATCACATTGAAAATCAGGATCAA
AATAAACATAACACAAGAAACTGGAAATAACGCCCATTCAGTTGCGAGCC
ACTTAATTGAGGAACTTGTTCCAATCCTTAATGATTTGCTAAATTAGATA
AAGGGCTATTTTCGTGTTGTCATTTTGATAAACTCGAAAGAATTCCAAAG
ATTTCAAGATTCTTTGATATTTAGCTCAATCGTcacatactcttaggttc
caaataaacaggccctcccccgcttgttaatttttcgaagattttccaAC
CTCCCGGACCTTATTAGTACCCCCCGGTTATTAATTCTTAAGAATGTTTC
TGCTGTTAAGAGAAGTCAGAAAATCAGAGAAGGGCccttttgctctaaat
agcctgatattaacctatatttaccttatttttggatTTACAGAATtgca
atttccaaccccctccccgGCAATTAGGTTCCCCCCTTTatcaaaatctc
gaaaattttctaacttCCCGTTTACTCGACCCCCCCCCGAACATAGGAGT
AAAAAACCGTCTTTATAATATATTTCAGAACCAAAAGTGTTAACCAATAG
ACGTGACACAGTTGTTGCCGTTATTGAAGAAGAACAGAGGGTGCAAATCT
CActtccaaagaaaaaaaaaatgaaagaaagtattaaacaaaactttaaa
aatccAAACGAGCAAAAATTGATGCTGTCAACAACTAAGAAAGTCAATGT
GAAAATGGCTAAAACACCGAAAGCTTCAATTACAACGACAACGACAACGA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073162-exon-scaffold_87-1491911889:48740..48893 | TCONS_00073162-exon-scaffold_87-1491911889:48740..48893 | Clytia hemisphaerica | exon |
| TCONS_00073162-exon-scaffold_87-1510915933:48740..48893 | TCONS_00073162-exon-scaffold_87-1510915933:48740..48893 | Clytia hemisphaerica | exon |
| TCONS_00073162-exon-scaffold_87-1575043694:48740..48893 | TCONS_00073162-exon-scaffold_87-1575043694:48740..48893 | Clytia hemisphaerica | exon |
| TCONS_00073162-exon-scaffold_87-1491911889:50368..50590 | TCONS_00073162-exon-scaffold_87-1491911889:50368..50590 | Clytia hemisphaerica | exon |
| TCONS_00073162-exon-scaffold_87-1510915933:50368..50590 | TCONS_00073162-exon-scaffold_87-1510915933:50368..50590 | Clytia hemisphaerica | exon |
| TCONS_00073162-exon-scaffold_87-1575043694:50368..50590 | TCONS_00073162-exon-scaffold_87-1575043694:50368..50590 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_87 | supercontig | scaffold_87:48740..50590 + |
Blast
The following BLAST results are available for this feature:
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