TCONS_00073201 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073201
Unique NameTCONS_00073201
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1505

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073201 ID=TCONS_00073201|Name=TCONS_00073201|organism=Clytia hemisphaerica|type=transcript|length=1505bp
GCTACAATATGAACCCTGAGATCCGCAACGAGGTGGAgttgaaaaaacaa
cgaaggGAAGAACAACGGATTGACGAACTGAAGAAAGCAGGAAAGAGTAA
AGAAGAAATCGAAGAAGCATTAAGCAAATACAAAggaaaagagaaagaga
agaaagaagTCATTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAA
TTGGACAGATTGATGAGTAACCCGAATAAAGAAGTTTACATTCCTCAGCA
ACGCAAAGAATGGAAACCTCGCGACCCGGCCGAGTTTGTGCGCCATGTTA
TGGGGTCTAGTGCTGGGGCTGGGAGTGGCGAATTTCACGTGTATCGAAAC
ATAAGGAAGCGGGAATTAAAACGTCAAGAATACATGGAAAAGAAAACTAT
GAAGGAAGAGCTAGATGAAGAATTTCAAGCGAAAATGGAGGCGAATAAAG
AAAAGGCCGAAGATTCAACGAACAAAAAGCGAGCTAAAAGGCAAcgaaga
aaacagaaaaaggcAATGGCAAAGAAATCTAAGAAATCTGAAGATCAACA
AGAGAAAGAACAAGAGGATAGCGACGAAGAAAAAAGCGATCAAGAAAGtg
aaggagaagaagaaaacaACAAAGAACCAGAAGAACCTCATTTCATCATT
GGTGGAAAATGAAACGGATCTTGACTGATACGTTTTCGCTATCCCNgaag
aagaagaagaaaacaacAAAGAACCAGAAGAACCTCATTTCATCATTGGT
GGAAAATGAAACGGATCTTGACTGATACGTTTTCGCTATCCCATACTCTC
TGAATGGCATTTGCTTAGACGTTAAAAAGAAAGCTAAGGTTGTCCTTTTT
GCTGTTGTTTCATTTCCTATGTTTGTTGGTTGGCTTGTTAGGTGGTCAct
gaaaatatacaaaaacgAGAAGTTTCGTAAGGCCATATTTCGAGTTCTTT
TACAACAACTACTCGGCATCCAATTAGGTAGTGATGAACGAAACTTatgg
ttgttgttgttattaaaGGAACCGAGAAAGTCTATTTTTCCCTTCTGCTG
CGAAACTAGATTCACTCTCAATATGATGGTGGTGATGGTATATTACTCCT
CGAAGTTAGTGAAGTATAAAGGTTTCACATAGATCAGAGCAAATTCTGCA
TTACCGGAACTGAAAAGACGACATTTGGGAACTCGAAAATGTAATGCTAA
ACGTAATATAACGGATAGGAGTGAATCAATCTCTTTTGATACTGGAAAAC
TGTTTGGATAAAAACAACATTGAATATTACGAACTTCGTCAACGTATGTT
GACTCTTAAACAATGAAAGTTGTCCTTGTAAATAgttattttttagtatt
tattATTCCACGTCCATTTAAATTTTCCAGTAGATTAACTGACCAAGTTT
TccagaaagtaaaaaatataaccCAAtgatttacacgcttttttataaga
acacaaggctgaaAAGTAGCCAAAACCTATGAACAAAtcaagaacaatct
gagcc
Run BLAST on NCBI

protein sequence of TCONS_00073201-protein

>TCONS_00073201-protein ID=TCONS_00073201-protein|Name=TCONS_00073201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
YNMNPEIRNEVELKKQRREEQRIDELKKAGKSKEEIEEALSKYKGKEKEK
KEVIVCHTVQDEQKRKLDRLMSNPNKEVYIPQQRKEWKPRDPAEFVRHVM
GSSAGAGSGEFHVYRNIRKRELKRQEYMEKKTMKEELDEEFQAKMEANKE
KAEDSTNKKRAKRQRRKQKKAMAKKSKKSEDQQEKEQEDSDEEKSDQESE
GEEENNKEPEEPHFIIGGK
Run BLAST on NCBI

transcript from alignment at scaffold_88:177168..181899+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073201 ID=TCONS_00073201|Name=TCONS_00073201|organism=Clytia hemisphaerica|type=transcript|length=4732bp|location=Sequence derived from alignment at scaffold_88:177168..181899+ (Clytia hemisphaerica)
GCTACAATATGAACCCTGAGATCCGCAACGAGGTGGAgttgaaaaaacaa cgaaggGAAGAACAACGGATTGACGAACTGAAGAAAGCAGGAAAGAGTAA AGAAGAAATCGAAGAAGCATTAAGCAAATACAAAggaaaagagaaagaga agaaagaagTCATTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAA TTGGACAGATTGATGAGTAACCCGGTAAGTACAGTGTGTCCTAAACCAGC GGATAAATTTTTATGTACAGTAAAATCGTCCTTATTTATGAAAACTTTTA TGACTTCTATACGCCTGTTTAGCAtgtattaccgagtttatgtatcagag gatatcgagggcgacggtaagtgaaatgatacaaaacaaagtcgataatT GATacacggctctatatcgcctgtGCTCACCTAAATagacgacggtatct tggtgtttttaccgtcgtcgagcaaagtggacggtgattttggagacatg tcaactttgctttataccgtccccctagatttatctcgaatacataaact cgctatagACTCTGTTGAGGAGCAATCTCTACTTCTCCGTTCACTGCAAG AACACTCTCTGGTGACAACAACAGTCTATGCTCACTTACCCAAGCCGCGC TGATTAGTTCTGGGAAGgacgaaacacgtgtctgcggatagatGACTTGT CTACTTGATATTTTAATCTCAAAAgcctattcaatcatcttgagAATTGA ATATAtattgattgaacagagaattGCAATTTTATTTACATCAAATTTGT AAAGCATCTGTTAGTCTATTATAAAAGTTTTACACTTACAAATATATCTA GGCTGAAAAAATGAAACCAAATCAAAACATCGTCAAAGCATTTGTCCACT CTCTGAAATTTCAAGAGAtttcatgacgtcataagtTAAAAATTTTATCC CAAATAAGTGAATTCCCAAATAACTTTGACTTGCACAATTATTATATAAC CTCTATGCTCACAATAGTTAGAAGATTTGAAAGCGCTAAGCGCTAAACGT TTTgaatcaatgataattttttttcaatttacagAATAAAGAAGTTTACA TTCCTCAGCAACGCAAAGAATGGAAACCTCGCGACCCGGCCGAGTTTGTG CGCCATGTTATGGGGTCTAGTGCTGGGGCTGGGAGTGGCGAATTTCACGT GTATCGAAACATAAGGAAGCGGGAATTAAAACGTCAAGAATACATGGAAA AGAAAACTATGAAGGTATGTTGAAAGGGGAGTACCGGCCTTCAATGCCAA TGGGAACATTCCATTGAAGTTGAcagtatatttttttttcacaaattaaa ttgACCCTGTGagacaaaatttattggcaTTGCAACCATGTCCAGTTATC GAATATTTCCGGACTTTCACACCTCGTATTGCCAGAGCGACTCCTTGTTG AGTAAAGGGCGATGAACTTTTTTCGTATTTTCCCGGACTGTCTCTTTTAA AAAAGAGGTCTAAAATCCTCACATTTTAATATAAAATATGCTTTTTTATT TAGGAAGAGCTAGATGAAGAATTTCAAGCGAAAATGGAGGCGAATAAAGA AAAGGCCGAAGATTCAACGAACAAAAAGCGAGCTAAAAGGTAACTACTCT ATCTCTTCCCAACGCTTCTTATTTTATGAGAATCTTACCCTTTTCATCTG GCTCTTGATAtacatgacgtaatcttttatacggaaacaccggAAAAACA CTgggcgtttgccaccagttttgaatttaaacaatgaaactggtggcaaa cgcccggtcttttcgtgtgtttccgtataaaagattacgtcatgaatatc aagaattcaACGCGACGTAAGTCAAATAGACCTAACGATATTCCCAAGta aattaaattatttaaaggaattttgagctgtgacatcgcattttattttt attttaacaaaaaagagCAAAGTCGAATTCAAATGAATTTACAATGGAAT ATTTTAGCCTGAAAATAGATGAAAGATGAAAATAGATCTTATTCATTTTG TTTTCCTTCTTCAGGCAAcgaagaaaacagaaaaaggcAATGGCAAAGAA ATCTAAGAAATCTGAAGGTATGAGTGGAAAATATATATCTGGATATTGTT TGATTTTTGGCTGAAAGCTGATAATTCTTAAGGTGTAAAATTAGCAATTA GAGCGCCTTTCAATGTTCACCAAAAACCAAACTTTTCGTTGTACCCTTTC TATATAATAGCAATCCCCCATATTGGTCAGCCCCCTTAAAAACGGGCCTA CTCTGCACGGAGTTGCCCGTCGTTCGTCGTTAAGAAAATTCAagtcgcaa gctcggtcgttgcTTGACCACGGGCAATACTTCTAAGTGCAGCCCTCGCA AaacggtcattattgtattagagtAGGGGTAGCGCAATCATCACAATTTA GCAGTGAACTGTTAAACTAAGGATGGTTTGTcactactctgtaccagagt gtatctcacgtttatcgcttcgtacagcttcgtagtacactttgtgcgca ttgtctgtttgataaaaaaattcccgtacggagacctctgcgatgaagta tgatttataaatagcaacacttctctcatcgtctcccctctctcaccaac actccatcgcagcggtcggttcgaaaaatctcaaatgagaaaagacaatg acaacagaccctctacggcaatgaattttgaaattagccgtaaatgctgg gtctgtgtacaggcAAGTTTGTCACGTGATCGTGGTAAAATGATATGAAT TATGAATCTTACGGTTCGTAAATCTACATTTTCATTTTGGTGgagtccca gctggcacacaacgttgtgaacattagataaacgttgaaacaacgttgtg tgccagctggagtCGTTGCAAAAGCGTGAGGGTTTGGTTGAAAAGGTTTT GACTATCGTTTATAAAGCAGCCTTACCATTATTAAGCTCATGAAAAATAA GTTGGTGGGATAAAAACATATAATAATTCGAATTTCGCAAAGTCAGTAAA AACATGAAGTAAATTAGAGGGGCGCGAAAATTAAGGGAACTTAGGGTACA CGCTTCCCCATTtcaacatgaatatttttcacttttttaagaaaactcat CTTTAGATATTCTTAAGGCATCCAAGCTAACATACTTCAACAAAAGTATG GCATTTTTCTGGAAGTCTTGGAGATAATTGACAATTTACGCGCAAAAAAA GGTCCCAAAAGGGCCAATTTTAGGTTCAGGATTTTTTAATGGtgatattc tttattttttttggccaATATCATCATATTCTTCTATTCCATAGAGTaca ttctcataaaaaagcactaaggcgaaaataaacaaatgtactgcttccgg aaaccggccgggtgataAAAAGATTGTTCTGAtccggccgcagactatgg tttcatctatatggttcatcataaagattTTCTTGTTGACCGTGGACTGT TGAAGCTATCAAAtgtcgtttggttagatattcccgcttgtaaatcaagt tttgtttgttAGTAGTTgctacattagtattcagggcttacttcatatgt ttgtacataaaagttatctttaaagtttttcaatttcaatgatcttaagt tatcaaaaatagcaacaacaaaaaattatttttccagcCGGCTACatgag ttttttttcttcactggaaacactacatttttttattttcacctaatttt gtttttctttatataaGCAGATCAACAAGAGAAAGAACAAGAGGATAGCG ACGAAGAAAAAAGCGATCAAGAAAGtgaaggagaagaagaaaacaACAAA GAACCAGAAGAACCTCATTTCATCATTGGTGGAAAATGAAACGGATCTTG ACTGATACGTTTTCGCTATCCCNgaagaagaagaagaaaacaacAAAGAA CCAGAAGAACCTCATTTCATCATTGGTGGAAAATGAAACGGATCTTGACT GATACGTTTTCGCTATCCCATACTCTCTGAATGGCATTTGCTTAGACGTT AAAAAGAAAGCTAAGGTTGTCCTTTTTGCTGTTGTTTCATTTCCTATGTT TGTTGGTTGGCTTGTTAGGTGGTCActgaaaatatacaaaaacgAGAAGT TTCGTAAGGCCATATTTCGAGTTCTTTTACAACAACTACTCGGCATCCAA TTAGGTAGTGATGAACGAAACTTatggttgttgttgttattaaaGGAACC GAGAAAGTCTATTTTTCCCTTCTGCTGCGAAACTAGATTCACTCTCAATA TGATGGTGGTGATGGTATATTACTCCTCGAAGTTAGTGAAGTATAAAGGT TTCACATAGATCAGAGCAAATTCTGCATTACCGGAACTGAAAAGACGACA TTTGGGAACTCGAAAATGTAATGCTAAACGTAATATAACGGATAGGAGTG AATCAATCTCTTTTGATACTGGAAAACTGTTTGGATAAAAACAACATTGA ATATTACGAACTTCGTCAACGTATGTTGACTCTTAAACAATGAAAGTTGT CCTTGTAAATAgttattttttagtatttattATTCCACGTCCATTTAAAT TTTCCAGTAGATTAACTGACCAAGTTTTccagaaagtaaaaaatataacc CAAtgatttacacgcttttttataagaacacaaggctgaaAAGTAGCCAA AACCTATGAACAAAtcaagaacaatctgagcc

Coding sequence (CDS) from alignment at scaffold_88:177168..181899+

>TCONS_00073201 ID=TCONS_00073201|Name=TCONS_00073201|organism=Clytia hemisphaerica|type=CDS|length=3300bp|location=Sequence derived from alignment at scaffold_88:177168..181899+ (Clytia hemisphaerica)
TACAATATGAACCCTGAGATCCGCAACGAGGTGGAgttgaaaaaacaacg
aaggGAAGAACAACGGATTGACGAACTGAAGAAAGCAGGAAAGAGTAAAG
AAGAAATCGAAGAAGCATTAAGCAAATACAAAggaaaagagaaagagaag
aaagaagTCATTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAATT
GGACAGATTGATGAGTAACCCGAATAAAGAAGTTTACATTCCTCAGCAAC
GCAAAGAATGGAAACCTCGCGACCCGGCCGAGTTTGTGCGCCATGTTATG
GGGTCTAGTGCTGGGGCTGGGAGTGGCGAATTTCACGTGTATCGAAACAT
AAGGAAGCGGGAATTAAAACGTCAAGAATACATGGAAAAGAAAACTATGA
AGGAAGAGCTAGATGAAGAATTTCAAGCGAAAATGGAGGCGAATAAAGAA
AAGGCCGAAGATTCAACGAACAAAAAGCGAGCTAAAAGGCAAcgaagaaa
acagaaaaaggcAATGGCAAAGAAATCTAAGAAATCTGAAGATCAACAAG
AGAAAGAACAAGAGGATAGCGACGAAGAAAAAAGCGATCAAGAAAGtgaa
ggagaagaagaaaacaACAAAGAACCAGAAGAACCTCATTTCATCATTGG
TGGAAAATGATACAATATGAACCCTGAGATCCGCAACGAGGTGGAgttga
aaaaacaacgaaggGAAGAACAACGGATTGACGAACTGAAGAAAGCAGGA
AAGAGTAAAGAAGAAATCGAAGAAGCATTAAGCAAATACAAAggaaaaga
gaaagagaagaaagaagTCATTGTTTGTCATACCGTTCAAGATGAACAGA
AACGGAAATTGGACAGATTGATGAGTAACCCGAATAAAGAAGTTTACATT
CCTCAGCAACGCAAAGAATGGAAACCTCGCGACCCGGCCGAGTTTGTGCG
CCATGTTATGGGGTCTAGTGCTGGGGCTGGGAGTGGCGAATTTCACGTGT
ATCGAAACATAAGGAAGCGGGAATTAAAACGTCAAGAATACATGGAAAAG
AAAACTATGAAGGAAGAGCTAGATGAAGAATTTCAAGCGAAAATGGAGGC
GAATAAAGAAAAGGCCGAAGATTCAACGAACAAAAAGCGAGCTAAAAGGC
AAcgaagaaaacagaaaaaggcAATGGCAAAGAAATCTAAGAAATCTGAA
GATCAACAAGAGAAAGAACAAGAGGATAGCGACGAAGAAAAAAGCGATCA
AGAAAGtgaaggagaagaagaaaacaACAAAGAACCAGAAGAACCTCATT
TCATCATTGGTGGAAAATGATACAATATGAACCCTGAGATCCGCAACGAG
GTGGAgttgaaaaaacaacgaaggGAAGAACAACGGATTGACGAACTGAA
GAAAGCAGGAAAGAGTAAAGAAGAAATCGAAGAAGCATTAAGCAAATACA
AAggaaaagagaaagagaagaaagaagTCATTGTTTGTCATACCGTTCAA
GATGAACAGAAACGGAAATTGGACAGATTGATGAGTAACCCGAATAAAGA
AGTTTACATTCCTCAGCAACGCAAAGAATGGAAACCTCGCGACCCGGCCG
AGTTTGTGCGCCATGTTATGGGGTCTAGTGCTGGGGCTGGGAGTGGCGAA
TTTCACGTGTATCGAAACATAAGGAAGCGGGAATTAAAACGTCAAGAATA
CATGGAAAAGAAAACTATGAAGGAAGAGCTAGATGAAGAATTTCAAGCGA
AAATGGAGGCGAATAAAGAAAAGGCCGAAGATTCAACGAACAAAAAGCGA
GCTAAAAGGCAAcgaagaaaacagaaaaaggcAATGGCAAAGAAATCTAA
GAAATCTGAAGATCAACAAGAGAAAGAACAAGAGGATAGCGACGAAGAAA
AAAGCGATCAAGAAAGtgaaggagaagaagaaaacaACAAAGAACCAGAA
GAACCTCATTTCATCATTGGTGGAAAATGATACAATATGAACCCTGAGAT
CCGCAACGAGGTGGAgttgaaaaaacaacgaaggGAAGAACAACGGATTG
ACGAACTGAAGAAAGCAGGAAAGAGTAAAGAAGAAATCGAAGAAGCATTA
AGCAAATACAAAggaaaagagaaagagaagaaagaagTCATTGTTTGTCA
TACCGTTCAAGATGAACAGAAACGGAAATTGGACAGATTGATGAGTAACC
CGAATAAAGAAGTTTACATTCCTCAGCAACGCAAAGAATGGAAACCTCGC
GACCCGGCCGAGTTTGTGCGCCATGTTATGGGGTCTAGTGCTGGGGCTGG
GAGTGGCGAATTTCACGTGTATCGAAACATAAGGAAGCGGGAATTAAAAC
GTCAAGAATACATGGAAAAGAAAACTATGAAGGAAGAGCTAGATGAAGAA
TTTCAAGCGAAAATGGAGGCGAATAAAGAAAAGGCCGAAGATTCAACGAA
CAAAAAGCGAGCTAAAAGGCAAcgaagaaaacagaaaaaggcAATGGCAA
AGAAATCTAAGAAATCTGAAGATCAACAAGAGAAAGAACAAGAGGATAGC
GACGAAGAAAAAAGCGATCAAGAAAGtgaaggagaagaagaaaacaACAA
AGAACCAGAAGAACCTCATTTCATCATTGGTGGAAAATGATACAATATGA
ACCCTGAGATCCGCAACGAGGTGGAgttgaaaaaacaacgaaggGAAGAA
CAACGGATTGACGAACTGAAGAAAGCAGGAAAGAGTAAAGAAGAAATCGA
AGAAGCATTAAGCAAATACAAAggaaaagagaaagagaagaaagaagTCA
TTGTTTGTCATACCGTTCAAGATGAACAGAAACGGAAATTGGACAGATTG
ATGAGTAACCCGAATAAAGAAGTTTACATTCCTCAGCAACGCAAAGAATG
GAAACCTCGCGACCCGGCCGAGTTTGTGCGCCATGTTATGGGGTCTAGTG
CTGGGGCTGGGAGTGGCGAATTTCACGTGTATCGAAACATAAGGAAGCGG
GAATTAAAACGTCAAGAATACATGGAAAAGAAAACTATGAAGGAAGAGCT
AGATGAAGAATTTCAAGCGAAAATGGAGGCGAATAAAGAAAAGGCCGAAG
ATTCAACGAACAAAAAGCGAGCTAAAAGGCAAcgaagaaaacagaaaaag
gcAATGGCAAAGAAATCTAAGAAATCTGAAGATCAACAAGAGAAAGAACA
AGAGGATAGCGACGAAGAAAAAAGCGATCAAGAAAGtgaaggagaagaag
aaaacaACAAAGAACCAGAAGAACCTCATTTCATCATTGGTGGAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045408XLOC_045408Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073201-exon-scaffold_88-1491911889:177168..177391TCONS_00073201-exon-scaffold_88-1491911889:177168..177391Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1510915933:177168..177391TCONS_00073201-exon-scaffold_88-1510915933:177168..177391Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1575043694:177168..177391TCONS_00073201-exon-scaffold_88-1575043694:177168..177391Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1491911889:178252..178431TCONS_00073201-exon-scaffold_88-1491911889:178252..178431Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1510915933:178252..178431TCONS_00073201-exon-scaffold_88-1510915933:178252..178431Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1575043694:178252..178431TCONS_00073201-exon-scaffold_88-1575043694:178252..178431Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1491911889:178721..178806TCONS_00073201-exon-scaffold_88-1491911889:178721..178806Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1510915933:178721..178806TCONS_00073201-exon-scaffold_88-1510915933:178721..178806Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1575043694:178721..178806TCONS_00073201-exon-scaffold_88-1575043694:178721..178806Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1491911889:179232..179284TCONS_00073201-exon-scaffold_88-1491911889:179232..179284Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1510915933:179232..179284TCONS_00073201-exon-scaffold_88-1510915933:179232..179284Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1575043694:179232..179284TCONS_00073201-exon-scaffold_88-1575043694:179232..179284Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1491911889:180938..181899TCONS_00073201-exon-scaffold_88-1491911889:180938..181899Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1510915933:180938..181899TCONS_00073201-exon-scaffold_88-1510915933:180938..181899Clytia hemisphaericaexon
TCONS_00073201-exon-scaffold_88-1575043694:180938..181899TCONS_00073201-exon-scaffold_88-1575043694:180938..181899Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073201-proteinTCONS_00073201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:177168..181899 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.10033 4.18864 5.19809 5.21686 3.58065 3.05328 4.73726 4.07894 7.18429 1.24942 2.43738 4.85082 3.46487 6.28915 6.62873 4.39033 5.61625 4.81389 1.85972 2.06239 4.52994 3.97968 6.0309 5.30885 6.76264 8.25387 3.2567 1.99421 3.9968 3.04255
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009548DUF1168
Blast
BLAST of TCONS_00073201 vs. Swiss-Prot (Human)
Match: PKRI1 (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.231e-34
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 3
Query:  159 VIVCHTVQDEQKRKLDRLMSNPNKEVYIPQQRKEWKPRDPAEFVRHVMGSSAGAGSGEFHVYRNIRKRELKRQEYMEKKTMKEELDEEFQAKMEANKEKAEDST 470
            +++     +EQK KL+RLM NP+K V IP++  EW PR P EFVR VMGSSAGAGSGEFHVYR++R+RE +RQ+YM+    K++LD EFQ ++E NK  AE+ T
Sbjct:   21 LVIPKNAAEEQKLKLERLMKNPDKAVPIPEKMSEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQT 124          
The following BLAST results are available for this feature:
BLAST of TCONS_00073201 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKRI13.231e-3456.73PRKR-interacting protein 1 OS=Homo sapiens GN=PRKR... [more]
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