|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073314 ID=TCONS_00073314|Name=TCONS_00073314|organism=Clytia hemisphaerica|type=transcript|length=633bp
taaaaaatgtcatcGGCTTGAAATGAAGAGCAATTTCAAATCGAAACCAT
CAAATATTTACCACCCATGAGTCTCTCCCGAAAAAGGCCGAAAAAACTTT
GACAGCCACTTAGATAATTTAACTTCATTGTTTCACCCTTGGAGGTGTCA
AACGTAAGCCATACAAAAAAATCCTGGGAGCAAAGGTTAGAAAAATTCAT
GTTTTCACCAAGGTCACGGTTGACATGGTTTTCCActaaaatagtattta
aaaatttttccctGATGACTGACTGAACAAAATTTCACCGAGTTAGCGAA
AAGAGTCGGATATTTACAAAGGAAATGGTCTAATCGAAACCAATAGTGAC
ATGAGTTTTAGCACTGTACTCTTTTTCATATTCAACCAAGGTAATTCGTA
AAGGCGGAAACGTAAGGGCGTAAGAGTAGACACGCCAGCAAAACTAGTGA
CGATTGACATAATAATAGTCAAGTTAGTGAAGTGGTGAAAATACAtctaa
aaacaagccaaaatgaAGGTAGTAATGTTTGAACACAAACAGAACTGTAC
TAGAGACGGAATGAATAAATAACGTAATCGTAGGAACGGCGTCAAAAACG
ACGGGTGTAACTTCTCATGCGTGCTGTCATTCT Run BLAST on NCBI transcript from alignment at scaffold_9:5946..7152- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073314 ID=TCONS_00073314|Name=TCONS_00073314|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at scaffold_9:5946..7152- (Clytia hemisphaerica)
TAAAAAATGTCATCGGCTTGAAATGAAGAGCAATTTCAAATCGAAACCAT
CAAATATTTACCACCCATGAGTCTCTCCCGAAAAAGGCCGAAAAAACTTT
GACAGCCACTTAGATAATTTAACTTCATTGTTTCACCCTTGGAGGTGTCA
AACGTAAGCCATACAAAAAAATCCTGGGAGCAAAGGTTAGAAAAATTCAT
GTTTTCACCAAGGTCACGGTTGACATGGTTTTCCACTAAAATAGTATTTA
AAAATTTTTCCCTGATGACTGACTGAACAAAATTTCACCGAGTTAGCGAA
AAGAGTCGGATATTTACAAAGGAAATGGTCTAATCGAAACCAATAGTGAC
ATGAGTTTTAGCACTGTACTCTTTTTCATATTCAACCAAGGTGATTCGTA
AAGGCGGAAACGTAAGGGCGTAAGAGTAGACACGCCAGCAAAACTAGTGA
CGATTGACATAATTATAGTCAAGTTATTGAAGTGGTGAAAATACATCTAA
AAACAAGCCAAAATGAAGGTAGTAATGTTTGAACACNAAAAGGGACCCTG
AATGGGACTGAAATTCCAAAATTTTCTACTTTTTCCCCAAATTTTCCAAA
AATAGGCACCCTACGAGGGACTGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCCCTTTTTCCCCCCCCCCCCCCCCCCCCCCCGGGGGAAATGATCCA
ATCGAAACCAATAGTGACATGAGTTTTAGCACTGTACTCTTTTTCATATT
AAAATTCAACCAAGGTAATTCGTAAAGGCGGAAACGTAAGGGCGTAAGAG
TAGACACGCCAGCAAAACTAGTGACGATTGACATAATAATAGTCAAGTTA
GTGAAGTGGTGAAAATACATCTAAAAACAAGCCAAAATGAAGGTAGTAAT
GTTTGAACACAAACAGAACTGTACTAGAGACGGAATGAATAAATAACGTA
ATCGTAGGAACGGCGTCAAAAACGACGGGTGTAACTTCTCATGCGTGCTG
TCATTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073314-exon-scaffold_9-1575043694:6763..7152 | TCONS_00073314-exon-scaffold_9-1575043694:6763..7152 | Clytia hemisphaerica | exon |
| TCONS_00073314-exon-scaffold_9-1575043694:5946..6188 | TCONS_00073314-exon-scaffold_9-1575043694:5946..6188 | Clytia hemisphaerica | exon |
| TCONS_00073314-exon-scaffold_9-1510915933:6763..7152 | TCONS_00073314-exon-scaffold_9-1510915933:6763..7152 | Clytia hemisphaerica | exon |
| TCONS_00073314-exon-scaffold_9-1510915933:5946..6188 | TCONS_00073314-exon-scaffold_9-1510915933:5946..6188 | Clytia hemisphaerica | exon |
| TCONS_00073314-exon-scaffold_9-1491911889:6763..7152 | TCONS_00073314-exon-scaffold_9-1491911889:6763..7152 | Clytia hemisphaerica | exon |
| TCONS_00073314-exon-scaffold_9-1491911889:5946..6188 | TCONS_00073314-exon-scaffold_9-1491911889:5946..6188 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:5946..7152 - |
Blast
The following BLAST results are available for this feature:
|
