TCONS_00073565 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073565
Unique NameTCONS_00073565
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073565 ID=TCONS_00073565|Name=TCONS_00073565|organism=Clytia hemisphaerica|type=transcript|length=316bp
taaaaaaaagtggaCGTGTAAAtggataaaataaacaaaagtcaTAAACG
TAATGTGTTTTTTATTCCTTCTTAGGCGTAACAGGTGAGCCTGGTATCAT
TCCAACACCTGGAATATTGAGCCAGACATCTCCTTCATTGATTTTTTGCT
TATGTTTATCGGACAATTTCTGTAGCGCTAAATTAAAACCATCACCAATC
TCCGTTGAGTTAAAGTAGTCGACGGCTGACATGCGTTGAGAGGCTTCCTC
GatactttgaaatttctttaacaTCGCATAAACTCCTTTCTCAAAGTCTT
CCTTTGTGTAAGATTT
Run BLAST on NCBI

transcript from alignment at scaffold_94:210389..210704

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073565 ID=TCONS_00073565|Name=TCONS_00073565|organism=Clytia hemisphaerica|type=transcript|length=316bp|location=Sequence derived from alignment at scaffold_94:210389..210704 (Clytia hemisphaerica)
AAATCTTACACAAAGGAAGACTTTGAGAAAGGAGTTTATGCGAtgttaaa
gaaatttcaaagtatCGAGGAAGCCTCTCAACGCATGTCAGCCGTCGACT
ACTTTAACTCAACGGAGATTGGTGATGGTTTTAATTTAGCGCTACAGAAA
TTGTCCGATAAACATAAGCAAAAAATCAATGAAGGAGATGTCTGGCTCAA
TATTCCAGGTGTTGGAATGATACCAGGCTCACCTGTTACGCCTAAGAAGG
AATAAAAAACACATTACGTTTAtgacttttgtttattttatccaTTTACA
CGtccactttttttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045667XLOC_045667Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073565-exon-scaffold_94-1491911889:210389..210704TCONS_00073565-exon-scaffold_94-1491911889:210389..210704Clytia hemisphaericaexon
TCONS_00073565-exon-scaffold_94-1510915933:210389..210704TCONS_00073565-exon-scaffold_94-1510915933:210389..210704Clytia hemisphaericaexon
TCONS_00073565-exon-scaffold_94-1575043694:210389..210704TCONS_00073565-exon-scaffold_94-1575043694:210389..210704Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:210389..210704 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	103.715	79.8371	6.39293	9.17697	2.51414	4.84425	4.3661	2.20777	1.98423	2.97648	0.941182	1.01003	0.497711	0.510138	1.40957	0.368752	0	0	0	0	3.20325	8.25882	0.909104	1.45533	0.735878	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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