TCONS_00073781 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073781
Unique NameTCONS_00073781
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073781 ID=TCONS_00073781|Name=TCONS_00073781|organism=Clytia hemisphaerica|type=transcript|length=356bp
gggatgttgacacTACAgctagaccttttcgcctttccatccatCTTGCA
TACAAAAACtatatggtggccgaattgctgtggtGAAACTCctttagaaa
gtatgcaaatgGCAAGTGTCAAGTTCTCGCAATTGTCAAATCTACTCCAA
AATTTTCACATCAATCTAAAAACTCGCGTAAAGTTTCTGAATAGCTTTAT
ACGTAGCAGATTAACCTACTCGTGCCAGAACTAGAACATCAACCAGAAAC
AATTTGATCGAATCGATACCGCTTACCGTACATTCCTCAGACGAATGGTA
AGGAATGGTATGAAACATGtcaatgaaaaggaaaatgatTTTCGCATGGT
TATTAG
Run BLAST on NCBI

transcript from alignment at scaffold_97:1016039..1016394

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073781 ID=TCONS_00073781|Name=TCONS_00073781|organism=Clytia hemisphaerica|type=transcript|length=356bp|location=Sequence derived from alignment at scaffold_97:1016039..1016394 (Clytia hemisphaerica)
CTAATAACCATGCGAAAatcattttccttttcattgaCATGTTTCATACC
ATTCCTTACCATTCGTCTGAGGAATGTACGGTAAGCGGTATCGATTCGAT
CAAATTGTTTCTGGTTGATGTTCTAGTTCTGGCACGAGTAGGTTAATCTG
CTACGTATAAAGCTATTCAGAAACTTTACGCGAGTTTTTAGATTGATGTG
AAAATTTTGGAGTAGATTTGACAATTGCGAGAACTTGACACTTGCcattt
gcatactttctaaagGAGTTTCaccacagcaattcggccaccatataGTT
TTTGTATGCAAGatggatggaaaggcgaaaaggtctagcTGTAgtgtcaa
catccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045827XLOC_045827Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073781-exon-scaffold_97-1491911889:1016039..1016394TCONS_00073781-exon-scaffold_97-1491911889:1016039..1016394Clytia hemisphaericaexon
TCONS_00073781-exon-scaffold_97-1510915933:1016039..1016394TCONS_00073781-exon-scaffold_97-1510915933:1016039..1016394Clytia hemisphaericaexon
TCONS_00073781-exon-scaffold_97-1575043694:1016039..1016394TCONS_00073781-exon-scaffold_97-1575043694:1016039..1016394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:1016039..1016394 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.470699	0.273263	0.534691	0.325467	1.02875	2.4823	0.580974	1.22026	0	0	0.803672	0.963066	1.16685	0.685218	0.294138	0.54353	0.742802	0	0	0.700038	0.682908	0.553443	0	0	0.46252	0.992796	0.35318	0.803623	0.545843
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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