XLOC_001109 (gene) - C. hemisphaerica

Overview
NameXLOC_001109
Unique NameXLOC_001109
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:257112..261814-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001109 ID=XLOC_001109|Name=XLOC_001109|organism=Clytia hemisphaerica|type=gene|length=4703bp|location=Sequence derived from alignment at sc0000018:257112..261814- (Clytia hemisphaerica)
AATTTTGTCAAAAGTGCAGAGTTCGTGGAAAACTTAATAAGAGTAAATCA ATATAGACGAATGAATTACAAAGCTGATAAACGTGTCTTCCCTGTATGAT ACATGAACTAAAAGAGACCCTGGTCATATGGACCAGGATATAAATGATAA ACTCTACATGCCCCCTTTTGGGGATCATAATGTCGTTATTAACAAATGAC TCAATCGTGTGATTGTCCTGACATTTTTGGAGACAAGGCTCTCGGTGGTC TTCTCTCTCTGGTACTTCTTCTGTGTGTCGGGACTTCTTGCTGTGCCCCT CGTTGACCCCCTTCGTCGGCGGTCTTTTGTGGTGGTTGGGAGGGTTGACA GCTTGGCTCATCACGGTGTAGTAGGGGTGTTGGAGTTTGTTGTATTTGGG GTGGATCAATGGTGACCTCGGGTCGTCGGCACGATTCCAGTATCGGTCGA AGGAAACGTCGGTTTCTGAGGGTAGCTCTGCGACTGCCATCCACCATGAC TCGATACTGGCGGTTTGGAAGTGTCTCTGTGATGTAACCCGTATTGTGCC ATTTCGTTGGTTGGCTTCCTTTCTGGTTTTGGATCTGGACCGTGTCCCCG ACGTTCAACGGGTTGAGGGGCTTTCGGGAATGATCGAGAGCGATGTGTTG TTTTCTCGCCATGGCTTGCTCGCGATAGTCGGCAATCTGGTTCCAACCGT CTTGAAGGCGAATTTCTTGAATCGGTAAGTGGTCTCGAACGGGTCTTCCA AAGAGGGCTACCGCTGGTGAGGTTCCAGTTTGTTGACATGGGGTGTTTCT GTGCGTGAGTAAGGCTTTAACTGCTTTTTCGTTGTCAAGCCTGCCTGTTT TAGGGTCGACGTTTCCTAGAAGAATTCTCTTGGCTGTTTTGACTCCTACC TCAGCCCTACCATTGCTTTGGGGGTAGTATGCAGAGGAGAGCCGGCGGTG AATGTTCCAGGTAGTCAGGAAGTTACGGTATTCAAACGAGTCGAACGGTG GTCCCCCGTCTGATGCGAGTTCTCGTGGGACCCCGAATATGGAGAAATAC ATAAGCAATACTTTCTTTATGTATTCGAATGTGGAATAATTAATGGTTGC TACTTCTATCCATCCAGAATACGCATCTACGTAGATAATGTAGCCGAATC CGGAAAGTTTGAAGAGATCTATCGCAACTTGTTGAAAAGGGTATTCAGGT GGGTCGGTCGAGATTGTCGGTTCTTTGTGTTGGGACGGGGCTTGCTCGTT GCACTGACGGCATCGATCTCGTAAGACACGGACGGCAGCATCAAGTCCTG GCCAAAAGAACCTTTCCCGGGCGTTGGCGAGCATACTGCTGACTCCTTGA TGTGCCGCGTGGAGGCCTTCTAACACGGTTTGACGTAAGGATGCGGGGAT CAACATCTTCTTTCCTTTGAAGGGAACGCCTTGGATGAGGTATAGCTCGT CTTTCATGCTCCAATAACTTCGGATATCCATGGGCAGTTGGTCCTTTGAC TTTGGGAATCCGTTGGTGATAGATTCGGCGAGTAGCGAGCATTCTTCGTC AAAGATTGCGTGGTTCTTGACGGTTTCCCATGAGACATTTTTGACACCGT TTCCTTGGGTATTGGCAAACATCACTGCTGCTATTTCGCTAGATTCGTCG TCGTCTGGTTTGACCGGGTTTCGGGAGGTGATGTCTGATACCTTCATTAC TTTCGATTTTCCGGGGAAGTGGATAATGTTGAAGCTGTACATAAGAGTTT TCTCTTTAAAATTTCGTACTCGGGGGTTCTCTATCGTTGACAGTTCTCGG TCATTGAATATGTTGATGAGTGGTTTGTGGTCTACCACCACGGTTAAATC GGGTGCACCCATTACAAACATACGACAGCGCTTTAGGCCAAAGGCGATGG CCAATGCTTCCCCTTCAATCGGTGCGTAACGACTTTCGCTATCTGTGGTG AAACGAGAGCCTGCAAAAATTAATTTCCAGTGTTCTTTACCGCAGNTGCT TCCCCTTCAATCGGTGCGTAACGACTTTCGCTATCTGTGGTGAAACGAGA GCCTGCAAAAATTAATTTCCAGTGTTCTTTACCGCAGTCTGGTTTCGATG GTTGCGGGCAGTTGCAATGTTTTTGGATCAGGTGGAATCCGATACCTGTC TTTGACCAATCTGTTATTAGACATGTTGGTCGTTCTCTAACGAAGGTCTC GACTCCGTCTTGGACAAGCTTAATGATCTCTGCTTTTGATTGGATAAAAA TCTGTTCGATTTGCTCGTCCCAGTAGAATGTTTTTGACGAAAGCAATTTA CGGAAGGGTTCCATCACTCTGGCTTGTGCAAATGAGTAAGCTAATTGGTT GACTAAACCGAACCACGATCTAACATCTGTAATCGACTTTGGTGTTGGAA AGTTTTGAATTGCTTCGATGATTTTCCGCAGAGGTTTATAACCGTCCTTT GTGATTTCGAACCCTGCGAACTCGGCTGTTTCTTGAGCGAATTGGAACTT GTTTGTGTTAAATACANAACCCTGCGAACTCGGCTGTTTCTTGAGCGAAT TGGAACTTGTTTGTGTTAAATACAATTCCGTTGTCGTTGCAGAGTTTTAA GTAATCGACGGTGTGCCAGAACGATTGCTCGATGGAGTCATCCCATAACA AAGTGTCATCAATGCAACGGACTGTTTGCTGTACGTCGATTGTGATGTCG TCGAACCTTCTGGTGTATGCGTCTCCTGACACGTGGAAACCCATGGGCGC TCTTCGATATCGATATCTGCCCCATTCAGTGATAAATGTTATCGCGTTTT CGGCATTTTCGTCTAGAGCGAGGCTGTGGTAGCCGTTCCACGCGTCAACG ACTGTTTTGCGTGTGGACGGAGGGATGGTTGAGACTAGATCGAATGGGGT TGGTGTGTGGTGAGTTTCGCGGAGGGTTGCTTTGTTCAACTGCTGTAGGT CAACTGTGCGTCTCGGGTCACCGTTTTTCTTGGCCGTGACGACCATACGG GCGCACCATTCGGTAGGTGTTCCTTGTGGTACTTTCTCAATAATGCCCAA ACGAACGTCTCTGTCTAAGTCTTGTTTGACACGCTCTTTCCAATGGTGGG GTACGGGAATTGGGGTGTGGACCGCATACGGCTTACAATCGTCCTTGAAT TCGACTTTCATTGGTTCCCCAGTCATTTGCGGTAGGGGTTGGTGGTTGAA TGCGGATGACTCAAAAGTTTTAAGTAACCAATCTTTCAGTTTCGGAACAT TACTCTCAATAGGTTCAAACGGTATTTCTGTTGGTCTTGGTGGCGTTGGG GTACGAGGAATACATGGGCACGACTGACCTTGTGCACATGCGGATGACTG TGTGTTTGGAAAACTCTCCTCTACAATACCTAAGTCCTTCATTGCTGTCT GTGATAGGTAGAGTCCCTTGCAATTTTTGGAGATGTACACCATTTGGTTA CTCTGGTGGTCATTGAGTTCGATTTTCAGAAAGAGAGCCCCCATGATCTC GAGTGGGGACCCTGTGATACCAATTGTCTTGTGTCTTGTCGATATCAAGT AGTTTTTGGGACAGTTCAATAATGATAAGATTTCTGGTCCTGCCGTGCAG GTTTGGCAGCCAGAATCTGCTACCGCTTGCGTTGCACCCTGTTTTAGTGA TGAGGGTGTTGTCTTTCCAAAACGTTCATGTGTTTGTCTTATAATGTCTA CTTTAATATAAACATTTGGTGGCGGTTCGGGTCGTTGAGTACTAAAAGAT TGATCTTTCCACTCCATGTGAGATTGGGTTTGTGTTATCTTCCCCCCATT GTATAAGGGGCCAAACGAAAATCCCCTTGGAGGTTGGCTGATGCGATGGA TGGGGGTTCTTCCATTTCCTCTTCGGTGACTGCATTGGAGCGAGAAGTGG TGTTTGATCTCTTCTGGCAGACGGCTTGGAAGTGTCCTTTAATCCCACAA TTGTTGCATGTTTTATTGAAGGCAGGGCAGTCCTTTCTTGCCATAGTTTT ACCCTCGTGTTGTGTTCTGCCACACCCTTTACAGTTCTGGGTGCTTTTAC TTGAGGGGCTGAATCCTTTTGAACGGCGGTAGGCGGATCTGTTTGCGGCA CTGATGCTAGGCTGAGAGTCAGTGGCCCTCATGAGGTCGGTGGACTCTTC GGTGGCTTCAAGGCATTGGAGACGTTCGACTTTCTGTTCAAGTGTTGGTA GCAGCGGAGACTCTGATAGAATACGGGATTGGTGTTGTTGGTTCTTTAAC CCTGAGATGAGTTGTTGTGTTATCATGTCATTGGAATAGTTTATTTCAAT CTCAGGTTCGTGTGTCGTGCAGGTAACTTTGAACTGGCAAAGAACAGCTT GGGATTTAAGGCGGGCAACGTACTGGGTAACTGTCTCGCCGTCCATCTGG GTTAAACGGAAGAAGTTAATTCGGTGGACCTCTTTGTGGGTACCTTTGAC TGCTACACGTTTGATGTGTTCGAGTAGGTTTGCTTCGGATGATGTGTCGA GGGTATCAGACCCAATGTATTCGAATAAAAGTTTATTAACCTCCTGGGAG CATGATGCACGAAGCTCCATACGTAAAATGTTGTGATCAGTGATACCTGT CATTGCCTTGTAACGGTTCCAACTGTCTTTAAACAATTCCCATTCTCGTT CGTCAGTATTTATGTTGATAATTGGGCGATCCGGGGCTTTGGTTTTTTGC CTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002125TCONS_00002125Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:257112..261814 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0.09 0.08 0.04 0.05 0.03 0.11 0.16 0.09 0.21 0.22 0.23 0.28 0.35 0.5 0.47 0.44 0.54 1.38 2.31 0.77 0.82 0.68 0.82 0.93 0.76 0.58 0.41 0.12 0.08