XLOC_001111 (gene) - C. hemisphaerica

Overview
NameXLOC_001111
Unique NameXLOC_001111
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:321428..326364-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001111 ID=XLOC_001111|Name=XLOC_001111|organism=Clytia hemisphaerica|type=gene|length=4937bp|location=Sequence derived from alignment at sc0000018:321428..326364- (Clytia hemisphaerica)
GCCAACTGCATTTCTTTCATTATTTATCATTATAAATTCATGGTATCATT TAGAGCTAAGAACGAAAAAAAATAAAAAAAATTTACCGAACAAGTGACAA AACAAAAAAATATGACAGATTTTATGGTATGGTATATTTTGTTTTATTTA AAGTAATTTACACTAAGTTTAAGCATATAAACGTTTTTCTAACCTATAAA AACACACTATTGGAATCCCGACATTTTATGACTAGCTCCGTATTACAAAC AACGACTTTTACATTATATACCCTGGGTCAAGCTATATCTGCCATTATTG ATCGGAGTTTTCAGAAAAATAGTACCCTATATGGTAGCACTACTCGATGT GGGTCACTTTTTCACTGTCATTGAGTAGTGGTACCCTTAGGGTACCATTT TCGAAGTCTCCCTGTTCTTCCCAACTAGTATTTTTTCCAAGAAAAAACTG TGACTGAATTCTCAACCCTTCCCCATGACTTGTGTTAGTAAAAATAGGTA CTCAGTAGTTCAACCTCTTAGACGATCTTATCACTAATGTAAAAAAGGGA ATAATTAGTTCCAATAAAGGTAATATGTTAACAATTCTTTTCATCTTTCA GACTGGCAGCAATTAAGAAATTCAGATCAGAGGATTAAATCAGAATCATG CTACCTGCGAGTGTGAAATAGGTACCTTGGTGACGGTGCCCCATTTTGCT TAAACAGGTTAAAATTTGAAATACCCTTTACTTTATACCCTCAATATGAC AATAATACCCTTTCGAAAAAGTCTCAAAATCATAATCTGATTGAACGTTT TTTTTTCTCTAGTACTTCCTAGTACTTTGGATGAGGGTCAAGTATTCTTA ACTTATTAACACTTGACTTTTTTACAAACATGAGAAATGATCAATTTGAG AGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATTTCTTCCTC AAAGCTTTCAATTTATCTCTAACAAAGAAAGCAGTTTTCTTCTGTTAACC AAATACGAAATAACTTATCAAATAACTTATTCTTATCAAATTCTGTGAAA TTCACACTAGAGGGTATTCTTAGGGTATTCTAAAGATTTGGCCAATTTTC ACCCTGATATTCTTATAGAAGATATTCTTATAAAAAAAGCGTGAACCAGC CACGTGTGGTCGAGTCCCACTAAAGATGCTACAGATCCTAAAGGTTAGCC TATTACCTAATGGACGGGGTTGGTGGGATTAGCAGGGTAGGTAGAAAAAT ACAATAAGACTAGGGAGGGGAGTTTTCCTTAGTGGAAAGCTTGTAAAAGG CGACTAACAAAAAAAAACTACTTCAAAATTTCGCTGCTCAAATAAAAAAG TGAACCAAGGTTTAGCATTTTGCTCTTTAAGTTCCGTTTTCTTTTTACTT TCTGTTATTTTACCAGGTTAAATTTTCTTGTAGTTGTTGTTTTTTAATTT TCTTTTGGGCTGAAATGGAATGAAATATGAGATTGGATTAAAGAAAAAAA AACTAATTAGTTGAATAGTGCTTAAAACCAGAACCTGTTACTCGAACTTT CCGAACCGACTTTTCACTCAAACTTATTGAACCCCGGAGGGGCACTCGAT TTCTAAACGGCGGCATGTGCCGCCGAAAATTGCCTTTCAAAATCGGACCC TTATGCAGTTCTTGAGCAGTGAAAAGGTACCCTTACAGTGCATTTTACCG AACGTTTCTGACCCTTACAGTGCAGCTTGATTTCATATCTTATTTTGCTG AAGCCATCTGAAAATGAGTCTGAGATGTCGACACAATAATGTGAATTAAA ACTGTAAAGATACACCAGATTTTTACTGTCAGACTTGCAATTAAGTAGTT CTCGAACACACCCTTACAGTGTATCCAGCTAAAAGAACACCCTTGTAGTG CACTCTATCAAAGTACACCCTTACAGTGCATTTCAAGGGTCTCGAAAAAT CGAACCATATGAGTGCCCCTGTTCGAGTAATAAGGTCTGAAAAATTTGAT TTTGGAAGGTAGAAACCAAATGTCAACTCATTAAGAAAATACAAGCTTTT TTTCGTCAACCAATATATATTTTCTGTTTTTTAAAATTTTCAATTTTCGT CAAAAAAGTGATGTTACTACATAATACAATGTCGTCATTAAAAAAGAAAA GAAAAAGAAAAAGAAACTGTTTATGAAAAATCCTCTTCAAAAAGTATGTT CGCTTTAAGCTTGAGGTACCTTTGAACTTTATGTTTGTTCGTAATATAAG AGACATTATATTCCGACTAGGCTTAAGGGGTTCTTATCCAACGCTTGCGC CGAAATTGAGCATACAGTGTGTCCCAAAAAAGTAAACAAATTATTATATT AAAGTCATCATTATATATGCGAAGTTTTATGACTTAGTTTACTTGTTTAC TTTCAATCTCCAAAAATTAATTTAGTCATCTTGGGAATTGAATATCTAAT GATTGAACAAAGAATTCTAATCTTCAATTATTCCATTCCCCAGTTTAGAT GACGAGTTTTGTGTTTTGAGGATTTTCCTTTATATAAAAATATGCCCGCT TTTTTTTGGGACATACTGTACATTCTTGTTCTCACTCGTTATAGAGAGAC GAAAGCTTTCCAATAAAATTTAAGCTTCTGCGAATATTACTTTTTGAAGG ATCTCCTGTTTTTATAGTTTTTAAAATTCAGATACCATAATATCGAAAAA TATTCATGCACATTTCTATTTACAATACAATAGTTCTATTTATACTGAGA CGATTAATTTGTCTGAGACGAGCAATTTAGAAAATGAGCATTATGGAGGA GTGTACTTTTTATTCATGTTTCAATAAATAGGATTTCCTCCACAGATCAC ATTTTACAAACTACTCGTCTCAGACGATTTTTCCGTCTCAGTATAAATGG AACTAATGTTTAAAAAAAGTGTAAAATTGGTTGTTCTTGTTTAATAAATT GGGAATAAATTACTGCGTGTCTTTAACTTAATAATATAGCTCATAATTTC TACGACTACTAATTTTAATAATACCTTGAAATTAACTCATTTATTTTTCT ACAGACTGTGCGAGCATTTCAAATAACAATAATGGTGTCATTTTCAATGT AATAACAGATAGCTATTAACTGATAACAGATTTTCAAAGTATGAAAAAGT AAGTTTGTTCAATCCTTATTACCATACTGCATTAATATCCCAACTTCGTG TTTCAAATCCCCATATGCCCTAACCTTTATATGTAAACCCCACCTATCGC CTCCAATTTTAAGGAGACCCAAAATTTTCACTTTTAGATTTAAAGATTAT ATCCAAAAAGATATATTTATTTACATCTATCTATCTACATATATTGAAAG TTCTCTAACTACTTAGCTCATTTCCCCTACAGCTTAAGAGAGCCTGTCTA CAGAGCATCCTCGAAAGAAATGAGAACCTGTTTTTAAAGTATCCTTTAAT CACAAAGACCAGATATTTCAACACGTTTTTTACATCAAAAAGGTGAACCT GTATTTCAACCATCCTTGGAAGAAAAATGACCAGCTGTTTTTCACACATC TTCATTTTCAGCTTCGTTTCGGAATAAACCATGTGTGATGCCGAGAGCGC CACCAGATACAAATCGGATGAAATTATCTCCCACTAGTGGACCCATGGCG TATAACGACTTCCGGCCGCGGCATTCATACGTCAAAAGGTCAGTGTCTAA ACAGTTTGTTTTTATATTAAATTCTTCCTCTGGATCCTCGCGTAGTAAAT GCTCCTCTTTGATGAAGTCCAGATTCGGTTTTGATCCAACATGGATGATG ACTCGGCTCACGTGAACTTTGAACGAGGCACCGCCCTTTTTACCACATGG CTCAATAAGTACTTCCTTATTGGGTAAGATTTCGGCCAATCGGTGTTGAG GAAGTGGCGTGTAAAATTCACATTTTGATTTGAGCTGTATCAGCGATTTT AATTTCAAATAGTCTGCGTAGGCAGACGATAATTGGTTTAGAACGAGATT AGGGTCTTTAGGCGAACGTCTGAACACGTGTATGACTGGTATCTGTCGTG AGATGAGGTAAAGGACTGCGTCTGCTGCAACTAGCCCACATCCTACTACA ACCACAGGGCATTTGTGTGTCTGGAGTCGATCGAAATCTGGGAAGTGGTG ATGTACGAAGGTGAAGTCTTCACCAGGGATCTCGAGTTTGCGTGGATTAT TGAAAGCTCCGGTTGCCATAACAATGTTGTCCGCTTTCACGGTATACGTT TCACCTGTTTGTTGGTCTGTATATTGAACGCCTTCCACCGTCCATTGTGA CGTGTTGGATAAGCTCTGTGAGATGGATTTGACGTAAACGTTATCAACGA AAAATGATGATAAGCCCATATATTTGACATAGTCGGAATAATAAAGCCCT ATATAATAAGGGTTTGTACGCTCTGGATGTACACCACCGACGCTGGGAAC TTTTGGTAGATTACCAAGACTCAATTGTTTCTGTTCATACCATTCATTGA ATGTATATCCAGGTAATTCCAACCAGTTTGCCAAACTAACAGTCAATTGT GAGTTAATCATATTATGCCATGAACCACCTGGTGGACCGAATCCAAGAAC AACATGTCGGACTTCATTTTCGGGTAAATATTTCCATTCGATAACCGATT CGNCGGTGGACCAAATCCAAGAACAACATGTCGGACTTCATTTTCGGGTA AATATTTCCATTCGATAACCGATTCGGGTTTGGTCAACATATCAGCATTT GGATGGTATAAATGGTCGAAGAGAATTGATACAGGATTCATGGTTCGTGA ATCGAACAAACCTTCGCTCAGCCATTGTAAATCCTGCGGAAATGAAGAGA ATCAAATTCTTTATTACATAGAAAAAGACAACTACAGATGAACATTCTTC AAGTGATATAAAAATCAAATATGAATTTAAAAAGTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002132TCONS_00002132Clytia hemisphaericatranscript
TCONS_00002131TCONS_00002131Clytia hemisphaericatranscript
TCONS_00002130TCONS_00002130Clytia hemisphaericatranscript
TCONS_00002129TCONS_00002129Clytia hemisphaericatranscript
TCONS_00002128TCONS_00002128Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:321428..326364 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38 0.18 0.44 0.43 27.19 21.25 16.05 22.77 24.9 71.15 29.58 38.36 22.48 17.85 8.01 12.68 7.97 7.75 16.19 40.73 24 17.54 6.21 6.54 17.21 17.05 44.51 28.79 5.64 4.81